RNA–Protein interactions for RNA: ENST00000593641.3

SSBP4-203, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 900 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-203ENST00000593641 ERVW-1Q9UQF0 538 aa23.45■■□□□ 1.34
SSBP4-203ENST00000593641 EDDM13A0A1B0GTR0 161 aa23.44■■□□□ 1.34
SSBP4-203ENST00000593641 A0A1W2PPC4 97 aa23.44■■□□□ 1.34
SSBP4-203ENST00000593641 TARSL2A2RTX5 802 aaKnown RBP23.44■■□□□ 1.34
SSBP4-203ENST00000593641 MED7O43513 233 aa23.44■■□□□ 1.34
SSBP4-203ENST00000593641 RNASEH2AO75792 299 aaKnown RBP23.44■■□□□ 1.34
SSBP4-203ENST00000593641 DKK1O94907 266 aa23.44■■□□□ 1.34
SSBP4-203ENST00000593641 GNA14O95837 355 aa23.44■■□□□ 1.34
SSBP4-203ENST00000593641 CTSKP43235 329 aa23.44■■□□□ 1.34
SSBP4-203ENST00000593641 RPL34P49207 117 aaKnown RBP23.44■■□□□ 1.34
SSBP4-203ENST00000593641 KCNH2Q12809 1159 aa23.44■■□□□ 1.34
SSBP4-203ENST00000593641 ARID5BQ14865 1188 aa23.44■■□□□ 1.34
SSBP4-203ENST00000593641 NCEH1Q6PIU2 408 aa23.44■■□□□ 1.34
SSBP4-203ENST00000593641 FOXR2Q6PJQ5 311 aa23.44■■□□□ 1.34
SSBP4-203ENST00000593641 BEND5Q7L4P6 421 aa23.44■■□□□ 1.34
SSBP4-203ENST00000593641 CHSY1Q86X52 802 aa23.44■■□□□ 1.34
SSBP4-203ENST00000593641 MMAAQ8IVH4 418 aaKnown RBP23.44■■□□□ 1.34
SSBP4-203ENST00000593641 ELOA2Q8IYF1 753 aaPredicted RBP23.44■■□□□ 1.34
SSBP4-203ENST00000593641 LGI2Q8N0V4 545 aa23.44■■□□□ 1.34
SSBP4-203ENST00000593641 MDM1Q8TC05 714 aa23.44■■□□□ 1.34
SSBP4-203ENST00000593641 KREMEN1Q96MU8 473 aa23.44■■□□□ 1.34
SSBP4-203ENST00000593641 ORAI3Q9BRQ5 295 aa23.44■■□□□ 1.34
SSBP4-203ENST00000593641 SERGEFQ9UGK8 458 aa23.44■■□□□ 1.34
SSBP4-203ENST00000593641 FZD4Q9ULV1 537 aa23.44■■□□□ 1.34
SSBP4-203ENST00000593641 GPSM3Q9Y4H4 160 aa23.44■■□□□ 1.34
SSBP4-203ENST00000593641 NBEAQ8NFP9 2946 aa23.43■■□□□ 1.34
SSBP4-203ENST00000593641 VILLO15195 856 aa23.43■■□□□ 1.34
SSBP4-203ENST00000593641 AFPP02771 609 aaKnown RBP23.43■■□□□ 1.34
SSBP4-203ENST00000593641 HOXB3P14651 431 aaPredicted RBP23.43■■□□□ 1.34
SSBP4-203ENST00000593641 GALCP54803 685 aa23.43■■□□□ 1.34
SSBP4-203ENST00000593641 ECT2LQ008S8 904 aa23.43■■□□□ 1.34
SSBP4-203ENST00000593641 IL9RQ01113 521 aa23.43■■□□□ 1.34
SSBP4-203ENST00000593641 C9orf64Q5T6V5 341 aa23.43■■□□□ 1.34
SSBP4-203ENST00000593641 RAP1GAP2Q684P5 730 aa23.43■■□□□ 1.34
SSBP4-203ENST00000593641 TRIM59Q8IWR1 403 aa23.43■■□□□ 1.34
SSBP4-203ENST00000593641 OR2T34Q8NGX1 318 aa23.43■■□□□ 1.34
SSBP4-203ENST00000593641 STK32AQ8WU08 396 aa23.43■■□□□ 1.34
SSBP4-203ENST00000593641 BTN2A3PQ96KV6 586 aa23.43■■□□□ 1.34
SSBP4-203ENST00000593641 SLC6A18Q96N87 628 aa23.43■■□□□ 1.34
SSBP4-203ENST00000593641 POPDC2Q9HBU9 364 aa23.43■■□□□ 1.34
SSBP4-203ENST00000593641 UTP18Q9Y5J1 556 aaKnown RBP eCLIP23.43■■□□□ 1.34
SSBP4-203ENST00000593641 ITIH6Q6UXX5 1313 aa23.42■■□□□ 1.34
SSBP4-203ENST00000593641 TTC34A8MYJ7 566 aa23.42■■□□□ 1.34
SSBP4-203ENST00000593641 PAPSS1O43252 624 aaPredicted RBP23.42■■□□□ 1.34
SSBP4-203ENST00000593641 TACR2P21452 398 aa23.42■■□□□ 1.34
SSBP4-203ENST00000593641 SLC8A1P32418 973 aa23.42■■□□□ 1.34
SSBP4-203ENST00000593641 CTSOP43234 321 aaPredicted RBP23.42■■□□□ 1.34
SSBP4-203ENST00000593641 PSMD8P48556 350 aa23.42■■□□□ 1.34
SSBP4-203ENST00000593641 COL9A2Q14055 689 aaPredicted RBP23.42■■□□□ 1.34
SSBP4-203ENST00000593641 MEA1Q16626 185 aa23.42■■□□□ 1.34
SSBP4-203ENST00000593641 CCDC157Q569K6 752 aa23.42■■□□□ 1.34
SSBP4-203ENST00000593641 KCNT1Q5JUK3 1230 aa23.42■■□□□ 1.34
SSBP4-203ENST00000593641 SYPL2Q5VXT5 272 aa23.42■■□□□ 1.34
SSBP4-203ENST00000593641 DENND1BQ6P3S1 775 aa23.42■■□□□ 1.34
SSBP4-203ENST00000593641 MED15Q96RN5 788 aa23.42■■□□□ 1.34
SSBP4-203ENST00000593641 INTS2Q9H0H0 1204 aaKnown RBP23.42■■□□□ 1.34
SSBP4-203ENST00000593641 NEUROG2Q9H2A3 272 aa23.42■■□□□ 1.34
SSBP4-203ENST00000593641 AASDHPPTQ9NRN7 309 aa23.42■■□□□ 1.34
SSBP4-203ENST00000593641 FTSJ1Q9UET6 329 aa23.42■■□□□ 1.34
SSBP4-203ENST00000593641 XPO7Q9UIA9 1087 aaKnown RBP23.42■■□□□ 1.34
SSBP4-203ENST00000593641 CNTN6Q9UQ52 1028 aa23.42■■□□□ 1.34
SSBP4-203ENST00000593641 ITPR1Q14643 2758 aa23.41■■□□□ 1.34
SSBP4-203ENST00000593641 F5H5T6 163 aa23.41■■□□□ 1.34
SSBP4-203ENST00000593641 LETM1O95202 739 aaPredicted RBP23.41■■□□□ 1.34
SSBP4-203ENST00000593641 ADH1BP00325 375 aa23.41■■□□□ 1.34
SSBP4-203ENST00000593641 NNMTP40261 264 aa23.41■■□□□ 1.34
SSBP4-203ENST00000593641 ZC3H12AQ5D1E8 599 aaKnown RBP23.41■■□□□ 1.34
SSBP4-203ENST00000593641 C19orf48Q6RUI8 117 aa23.41■■□□□ 1.34
SSBP4-203ENST00000593641 SND1Q7KZF4 910 aaKnown RBP eCLIP23.41■■□□□ 1.34
SSBP4-203ENST00000593641 ATP6V0D2Q8N8Y2 350 aa23.41■■□□□ 1.34
SSBP4-203ENST00000593641 SLC4A5Q9BY07 1137 aa23.41■■□□□ 1.34
SSBP4-203ENST00000593641 ADAMTS1Q9UHI8 967 aa23.41■■□□□ 1.34
SSBP4-203ENST00000593641 SLC12A6Q9UHW9 1150 aa23.41■■□□□ 1.34
SSBP4-203ENST00000593641 COL5A1P20908 1838 aaPredicted RBP23.4■■□□□ 1.34
SSBP4-203ENST00000593641 A0A1B0GTQ1 180 aa23.4■■□□□ 1.34
SSBP4-203ENST00000593641 PPP1R3GB7ZBB8 358 aa23.4■■□□□ 1.34
SSBP4-203ENST00000593641 E5RJQ4 531 aa23.4■■□□□ 1.34
SSBP4-203ENST00000593641 THAP12O43422 761 aa23.4■■□□□ 1.34
SSBP4-203ENST00000593641 TRUB2O95900 331 aaKnown RBP23.4■■□□□ 1.34
SSBP4-203ENST00000593641 GNA15P30679 374 aa23.4■■□□□ 1.34
SSBP4-203ENST00000593641 STX17P56962 302 aa23.4■■□□□ 1.34
SSBP4-203ENST00000593641 YWHAZP63104 245 aaKnown RBP23.4■■□□□ 1.34
SSBP4-203ENST00000593641 PAK1Q13153 545 aa23.4■■□□□ 1.34
SSBP4-203ENST00000593641 BECN1Q14457 450 aa23.4■■□□□ 1.34
SSBP4-203ENST00000593641 APCDD1Q8J025 514 aa23.4■■□□□ 1.34
SSBP4-203ENST00000593641 RPL10LQ96L21 214 aaKnown RBP23.4■■□□□ 1.34
SSBP4-203ENST00000593641 ELF4Q99607 663 aaPredicted RBP23.4■■□□□ 1.34
SSBP4-203ENST00000593641 THAP9Q9H5L6 903 aa23.4■■□□□ 1.34
SSBP4-203ENST00000593641 UBE2TQ9NPD8 197 aaPredicted RBP23.4■■□□□ 1.34
SSBP4-203ENST00000593641 SLCO3A1Q9UIG8 710 aa23.4■■□□□ 1.34
SSBP4-203ENST00000593641 TPX2Q9ULW0 747 aaKnown RBP23.4■■□□□ 1.34
SSBP4-203ENST00000593641 GOT1P17174 413 aa23.39■■□□□ 1.33
SSBP4-203ENST00000593641 C5AR1P21730 350 aa23.39■■□□□ 1.33
SSBP4-203ENST00000593641 BMP6P22004 513 aa23.39■■□□□ 1.33
SSBP4-203ENST00000593641 MARSP56192 900 aaKnown RBP23.39■■□□□ 1.33
SSBP4-203ENST00000593641 SLC12A1Q13621 1099 aa23.39■■□□□ 1.33
SSBP4-203ENST00000593641 ELAVL3Q14576 367 aaKnown RBP23.39■■□□□ 1.33
SSBP4-203ENST00000593641 ENOSF1Q7L5Y1 443 aa23.39■■□□□ 1.33
SSBP4-203ENST00000593641 TMEM110Q86TL2 294 aa23.39■■□□□ 1.33
SSBP4-203ENST00000593641 STK40Q8N2I9 435 aa23.39■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms