RNA–Protein interactions for RNA: ENST00000593048.5

CIRBP-241, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 650 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-241ENST00000593048 WDTC1Q8N5D0 677 aa16.69■□□□□ 0.26
CIRBP-241ENST00000593048 CAMK1GQ96NX5 476 aa16.69■□□□□ 0.26
CIRBP-241ENST00000593048 CPXM1Q96SM3 734 aa16.69■□□□□ 0.26
CIRBP-241ENST00000593048 BPIFA3Q9BQP9 254 aa16.69■□□□□ 0.26
CIRBP-241ENST00000593048 ADAM33Q9BZ11 813 aa16.69■□□□□ 0.26
CIRBP-241ENST00000593048 PDCL3Q9H2J4 239 aa16.69■□□□□ 0.26
CIRBP-241ENST00000593048 GAREM1Q9H706 876 aa16.69■□□□□ 0.26
CIRBP-241ENST00000593048 DDIT4Q9NX09 232 aa16.69■□□□□ 0.26
CIRBP-241ENST00000593048 DACH1Q9UI36 760 aa16.69■□□□□ 0.26
CIRBP-241ENST00000593048 SCML1Q9UN30 329 aa16.69■□□□□ 0.26
CIRBP-241ENST00000593048 PCDHGC3Q9UN70 934 aa16.69■□□□□ 0.26
CIRBP-241ENST00000593048 ADAMTS9Q9P2N4 1935 aa16.68■□□□□ 0.26
CIRBP-241ENST00000593048 FAM47DPA6NHR8 397 aa16.68■□□□□ 0.26
CIRBP-241ENST00000593048 C1QTNF9BB2RNN3 333 aa16.68■□□□□ 0.26
CIRBP-241ENST00000593048 HYAL3O43820 417 aaPredicted RBP16.68■□□□□ 0.26
CIRBP-241ENST00000593048 SIN3BO75182 1162 aa16.68■□□□□ 0.26
CIRBP-241ENST00000593048 GJB3O75712 270 aa16.68■□□□□ 0.26
CIRBP-241ENST00000593048 TRIM16O95361 564 aa16.68■□□□□ 0.26
CIRBP-241ENST00000593048 IGLV3-25P01717 112 aa16.68■□□□□ 0.26
CIRBP-241ENST00000593048 PROS1P07225 676 aa16.68■□□□□ 0.26
CIRBP-241ENST00000593048 C1QTNF9P0C862 333 aa16.68■□□□□ 0.26
CIRBP-241ENST00000593048 NNMTP40261 264 aa16.68■□□□□ 0.26
CIRBP-241ENST00000593048 CSNK1EP49674 416 aaKnown RBP16.68■□□□□ 0.26
CIRBP-241ENST00000593048 AFF3P51826 1226 aaKnown RBP16.68■□□□□ 0.26
CIRBP-241ENST00000593048 PITX1P78337 314 aaPredicted RBP16.68■□□□□ 0.26
CIRBP-241ENST00000593048 TRIP6Q15654 476 aaKnown RBP16.68■□□□□ 0.26
CIRBP-241ENST00000593048 VWA3BQ502W6 1294 aa16.68■□□□□ 0.26
CIRBP-241ENST00000593048 HSP90AA4PQ58FG1 418 aa16.68■□□□□ 0.26
CIRBP-241ENST00000593048 RABGAP1LQ5R372 815 aa16.68■□□□□ 0.26
CIRBP-241ENST00000593048 UNQ6494/PRO21346Q6UXR6 183 aa16.68■□□□□ 0.26
CIRBP-241ENST00000593048 NAXDQ8IW45 347 aa16.68■□□□□ 0.26
CIRBP-241ENST00000593048 KDM1BQ8NB78 822 aa16.68■□□□□ 0.26
CIRBP-241ENST00000593048 C1orf131Q8NDD1 294 aaKnown RBP16.68■□□□□ 0.26
CIRBP-241ENST00000593048 SETD7Q8WTS6 366 aaKnown RBP16.68■□□□□ 0.26
CIRBP-241ENST00000593048 MYO19Q96H55 970 aa16.68■□□□□ 0.26
CIRBP-241ENST00000593048 PPP1R9BQ96SB3 815 aa16.68■□□□□ 0.26
CIRBP-241ENST00000593048 RSPH9Q9H1X1 276 aaPredicted RBP16.68■□□□□ 0.26
CIRBP-241ENST00000593048 NDST4Q9H3R1 872 aa16.68■□□□□ 0.26
CIRBP-241ENST00000593048 ASNSD1Q9NWL6 643 aa16.68■□□□□ 0.26
CIRBP-241ENST00000593048 FBXL12Q9NXK8 326 aa16.68■□□□□ 0.26
CIRBP-241ENST00000593048 WASF3Q9UPY6 502 aa16.68■□□□□ 0.26
CIRBP-241ENST00000593048 ZBTB32Q9Y2Y4 487 aaPredicted RBP16.68■□□□□ 0.26
CIRBP-241ENST00000593048 ASCC3Q8N3C0 2202 aaKnown RBP16.68■□□□□ 0.26
CIRBP-241ENST00000593048 EDDM13A0A1B0GTR0 161 aa16.67■□□□□ 0.26
CIRBP-241ENST00000593048 A0A1B0GVT2 93 aa16.67■□□□□ 0.26
CIRBP-241ENST00000593048 TARSL2A2RTX5 802 aaKnown RBP16.67■□□□□ 0.26
CIRBP-241ENST00000593048 TTC34A8MYJ7 566 aa16.67■□□□□ 0.26
CIRBP-241ENST00000593048 FOXN3O00409 490 aaPredicted RBP16.67■□□□□ 0.26
CIRBP-241ENST00000593048 CTSOP43234 321 aaPredicted RBP16.67■□□□□ 0.26
CIRBP-241ENST00000593048 BPIFB4P59827 614 aa16.67■□□□□ 0.26
CIRBP-241ENST00000593048 FAM193AP78312 1265 aa16.67■□□□□ 0.26
CIRBP-241ENST00000593048 NME3Q13232 169 aa16.67■□□□□ 0.26
CIRBP-241ENST00000593048 SLC12A1Q13621 1099 aa16.67■□□□□ 0.26
CIRBP-241ENST00000593048 HLA-BQ31612 363 aa16.67■□□□□ 0.26
CIRBP-241ENST00000593048 TTC39BQ5VTQ0 682 aaPredicted RBP16.67■□□□□ 0.26
CIRBP-241ENST00000593048 FAM183BPQ6ZVS7 135 aa16.67■□□□□ 0.26
CIRBP-241ENST00000593048 USP30Q70CQ3 517 aa16.67■□□□□ 0.26
CIRBP-241ENST00000593048 ADAT2Q7Z6V5 191 aaKnown RBP16.67■□□□□ 0.26
CIRBP-241ENST00000593048 SLC47A2Q86VL8 602 aa16.67■□□□□ 0.26
CIRBP-241ENST00000593048 MMAAQ8IVH4 418 aaKnown RBP16.67■□□□□ 0.26
CIRBP-241ENST00000593048 APCDD1Q8J025 514 aa16.67■□□□□ 0.26
CIRBP-241ENST00000593048 BIRC7Q96CA5 298 aa16.67■□□□□ 0.26
CIRBP-241ENST00000593048 RPL10LQ96L21 214 aaKnown RBP16.67■□□□□ 0.26
CIRBP-241ENST00000593048 MRGPRX3Q96LB0 322 aa16.67■□□□□ 0.26
CIRBP-241ENST00000593048 SLC2A13Q96QE2 648 aa16.67■□□□□ 0.26
CIRBP-241ENST00000593048 OMDQ99983 421 aa16.67■□□□□ 0.26
CIRBP-241ENST00000593048 TUBGCP2Q9BSJ2 902 aa16.67■□□□□ 0.26
CIRBP-241ENST00000593048 PABPC3Q9H361 631 aaKnown RBP16.67■□□□□ 0.26
CIRBP-241ENST00000593048 IL21RQ9HBE5 538 aa16.67■□□□□ 0.26
CIRBP-241ENST00000593048 PCDH15Q96QU1 1955 aa16.67■□□□□ 0.26
CIRBP-241ENST00000593048 CKAP5Q14008 2032 aa16.67■□□□□ 0.26
CIRBP-241ENST00000593048 A0A1W2PP55 124 aa16.66■□□□□ 0.26
CIRBP-241ENST00000593048 MID1O15344 667 aa16.66■□□□□ 0.26
CIRBP-241ENST00000593048 ERBB2P04626 1255 aa16.66■□□□□ 0.26
CIRBP-241ENST00000593048 C7P10643 843 aa16.66■□□□□ 0.26
CIRBP-241ENST00000593048 IGF2RP11717 2491 aa16.66■□□□□ 0.26
CIRBP-241ENST00000593048 PDGFRAP16234 1089 aa16.66■□□□□ 0.26
CIRBP-241ENST00000593048 ERCC5P28715 1186 aaPredicted RBP16.66■□□□□ 0.26
CIRBP-241ENST00000593048 CLCN1P35523 988 aa16.66■□□□□ 0.26
CIRBP-241ENST00000593048 NUMBP49757 651 aa16.66■□□□□ 0.26
CIRBP-241ENST00000593048 OXCT1P55809 520 aa16.66■□□□□ 0.26
CIRBP-241ENST00000593048 SLC6A3Q01959 620 aa16.66■□□□□ 0.26
CIRBP-241ENST00000593048 SULT2A1Q06520 285 aa16.66■□□□□ 0.26
CIRBP-241ENST00000593048 MTA1Q13330 715 aa16.66■□□□□ 0.26
CIRBP-241ENST00000593048 RAPGEF1Q13905 1077 aa16.66■□□□□ 0.26
CIRBP-241ENST00000593048 CST6Q15828 149 aa16.66■□□□□ 0.26
CIRBP-241ENST00000593048 ZNF423Q2M1K9 1284 aa16.66■□□□□ 0.26
CIRBP-241ENST00000593048 DPCR1Q3MIW9 517 aa16.66■□□□□ 0.26
CIRBP-241ENST00000593048 C9orf64Q5T6V5 341 aa16.66■□□□□ 0.26
CIRBP-241ENST00000593048 SMYD5Q6GMV2 418 aa16.66■□□□□ 0.26
CIRBP-241ENST00000593048 CIR1Q86X95 450 aaPredicted RBP16.66■□□□□ 0.26
CIRBP-241ENST00000593048 CCAR2Q8N163 923 aaKnown RBP16.66■□□□□ 0.26
CIRBP-241ENST00000593048 C1orf216Q8TAB5 229 aa16.66■□□□□ 0.26
CIRBP-241ENST00000593048 RPRD1AQ96P16 312 aaPredicted RBP16.66■□□□□ 0.26
CIRBP-241ENST00000593048 TM9SF3Q9HD45 589 aa16.66■□□□□ 0.26
CIRBP-241ENST00000593048 SIX2Q9NPC8 291 aa16.66■□□□□ 0.26
CIRBP-241ENST00000593048 PLCB1Q9NQ66 1216 aa16.66■□□□□ 0.26
CIRBP-241ENST00000593048 TM7SF3Q9NS93 570 aa16.66■□□□□ 0.26
CIRBP-241ENST00000593048 SLCO3A1Q9UIG8 710 aa16.66■□□□□ 0.26
CIRBP-241ENST00000593048 AJAP1Q9UKB5 411 aaPredicted RBP16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms