RNA–Protein interactions for RNA: ENST00000592741.5

PRKCSH-217, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRKCSH, Length 2,100 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-217ENST00000592741 RPLP2P05387 115 aaKnown RBP16.98■□□□□ 0.31
PRKCSH-217ENST00000592741 GP5P40197 560 aa16.98■□□□□ 0.31
PRKCSH-217ENST00000592741 CXCR3P49682 368 aa16.98■□□□□ 0.31
PRKCSH-217ENST00000592741 GALNT2Q10471 571 aa16.98■□□□□ 0.31
PRKCSH-217ENST00000592741 PDE1CQ14123 709 aaPredicted RBP16.98■□□□□ 0.31
PRKCSH-217ENST00000592741 ACCSLQ4AC99 568 aa16.98■□□□□ 0.31
PRKCSH-217ENST00000592741 FASTKD1Q53R41 847 aaKnown RBP16.98■□□□□ 0.31
PRKCSH-217ENST00000592741 GRTP1Q5TC63 336 aa16.98■□□□□ 0.31
PRKCSH-217ENST00000592741 CES4AQ5XG92 561 aa16.98■□□□□ 0.31
PRKCSH-217ENST00000592741 PRR11Q96HE9 360 aaPredicted RBP16.98■□□□□ 0.31
PRKCSH-217ENST00000592741 GORASP1Q9BQQ3 440 aa16.98■□□□□ 0.31
PRKCSH-217ENST00000592741 TKTL2Q9H0I9 626 aa16.98■□□□□ 0.31
PRKCSH-217ENST00000592741 THAP1Q9NVV9 213 aa16.98■□□□□ 0.31
PRKCSH-217ENST00000592741 VANGL2Q9ULK5 521 aa16.98■□□□□ 0.31
PRKCSH-217ENST00000592741 C15orf41Q9Y2V0 281 aa16.98■□□□□ 0.31
PRKCSH-217ENST00000592741 HBS1LQ9Y450 684 aaKnown RBP16.98■□□□□ 0.31
PRKCSH-217ENST00000592741 PSAT1Q9Y617 370 aa16.98■□□□□ 0.31
PRKCSH-217ENST00000592741 SCN10AQ9Y5Y9 1956 aa16.98■□□□□ 0.31
PRKCSH-217ENST00000592741 AMHP03971 560 aa16.97■□□□□ 0.31
PRKCSH-217ENST00000592741 ERVK-10P10266 1014 aa16.97■□□□□ 0.31
PRKCSH-217ENST00000592741 ESRRAP11474 423 aaPredicted RBP16.97■□□□□ 0.31
PRKCSH-217ENST00000592741 MAP2K2P36507 400 aa16.97■□□□□ 0.31
PRKCSH-217ENST00000592741 IRX4P78413 519 aa16.97■□□□□ 0.31
PRKCSH-217ENST00000592741 MGAT3Q09327 533 aa16.97■□□□□ 0.31
PRKCSH-217ENST00000592741 CES3Q6UWW8 571 aa16.97■□□□□ 0.31
PRKCSH-217ENST00000592741 ALYREFQ86V81 257 aaKnown RBP16.97■□□□□ 0.31
PRKCSH-217ENST00000592741 SERINC5Q86VE9 423 aa16.97■□□□□ 0.31
PRKCSH-217ENST00000592741 IFNL1Q8IU54 200 aa16.97■□□□□ 0.31
PRKCSH-217ENST00000592741 DNAAF3Q8N9W5 541 aa16.97■□□□□ 0.31
PRKCSH-217ENST00000592741 ZNF669Q96BR6 464 aaPredicted RBP16.97■□□□□ 0.31
PRKCSH-217ENST00000592741 VAT1Q99536 393 aa16.97■□□□□ 0.31
PRKCSH-217ENST00000592741 MIPEPQ99797 713 aa16.97■□□□□ 0.31
PRKCSH-217ENST00000592741 PAAF1Q9BRP4 392 aa16.97■□□□□ 0.31
PRKCSH-217ENST00000592741 RHOBTB2Q9BYZ6 727 aa16.97■□□□□ 0.31
PRKCSH-217ENST00000592741 SPC25Q9HBM1 224 aa16.97■□□□□ 0.31
PRKCSH-217ENST00000592741 ZFYVE28Q9HCC9 887 aa16.97■□□□□ 0.31
PRKCSH-217ENST00000592741 CASS4Q9NQ75 786 aa16.97■□□□□ 0.31
PRKCSH-217ENST00000592741 ZBTB24O43167 697 aaPredicted RBP16.97■□□□□ 0.31
PRKCSH-217ENST00000592741 ATP5BP06576 529 aaKnown RBP16.97■□□□□ 0.31
PRKCSH-217ENST00000592741 RAB27AP51159 221 aa16.97■□□□□ 0.31
PRKCSH-217ENST00000592741 INSCQ1MX18 579 aa16.97■□□□□ 0.31
PRKCSH-217ENST00000592741 C16orf46Q6P387 395 aa16.97■□□□□ 0.31
PRKCSH-217ENST00000592741 TTC7BQ86TV6 843 aa16.97■□□□□ 0.31
PRKCSH-217ENST00000592741 SERBP1Q8NC51 408 aaKnown RBP eCLIP16.97■□□□□ 0.31
PRKCSH-217ENST00000592741 SMC1BQ8NDV3 1235 aa16.97■□□□□ 0.31
PRKCSH-217ENST00000592741 GIMAP7Q8NHV1 300 aa16.97■□□□□ 0.31
PRKCSH-217ENST00000592741 RTP3Q9BQQ7 232 aa16.97■□□□□ 0.31
PRKCSH-217ENST00000592741 ACBD6Q9BR61 282 aa16.97■□□□□ 0.31
PRKCSH-217ENST00000592741 NMUR2Q9GZQ4 415 aa16.97■□□□□ 0.31
PRKCSH-217ENST00000592741 RNPEPL1Q9HAU8 725 aa16.97■□□□□ 0.31
PRKCSH-217ENST00000592741 OR12D3Q9UGF7 316 aa16.97■□□□□ 0.31
PRKCSH-217ENST00000592741 ADAM28Q9UKQ2 775 aa16.97■□□□□ 0.31
PRKCSH-217ENST00000592741 EMCNQ9ULC0 261 aa16.97■□□□□ 0.31
PRKCSH-217ENST00000592741 SNX10Q9Y5X0 201 aa16.97■□□□□ 0.31
PRKCSH-217ENST00000592741 GYG2O15488 501 aa16.96■□□□□ 0.31
PRKCSH-217ENST00000592741 PLIN3O60664 434 aa16.96■□□□□ 0.31
PRKCSH-217ENST00000592741 PEX11AO75192 247 aa16.96■□□□□ 0.31
PRKCSH-217ENST00000592741 USP12O75317 370 aa16.96■□□□□ 0.31
PRKCSH-217ENST00000592741 KITP10721 976 aa16.96■□□□□ 0.31
PRKCSH-217ENST00000592741 OLIG2Q13516 323 aa16.96■□□□□ 0.31
PRKCSH-217ENST00000592741 FRG1Q14331 258 aaKnown RBP16.96■□□□□ 0.31
PRKCSH-217ENST00000592741 MBLAC2Q68D91 279 aa16.96■□□□□ 0.31
PRKCSH-217ENST00000592741 PM20D1Q6GTS8 502 aa16.96■□□□□ 0.31
PRKCSH-217ENST00000592741 FAM171BQ6P995 826 aa16.96■□□□□ 0.31
PRKCSH-217ENST00000592741 ZCCHC23Q6ZST2 131 aa16.96■□□□□ 0.31
PRKCSH-217ENST00000592741 TAC4Q86UU9 113 aa16.96■□□□□ 0.31
PRKCSH-217ENST00000592741 SH3TC2Q8TF17 1288 aa16.96■□□□□ 0.31
PRKCSH-217ENST00000592741 RNF34Q969K3 372 aa16.96■□□□□ 0.31
PRKCSH-217ENST00000592741 SIKE1Q9BRV8 207 aa16.96■□□□□ 0.31
PRKCSH-217ENST00000592741 TRIM62Q9BVG3 475 aa16.96■□□□□ 0.31
PRKCSH-217ENST00000592741 CADM1Q9BY67 442 aaKnown RBP16.96■□□□□ 0.31
PRKCSH-217ENST00000592741 ZNF395Q9H8N7 513 aaPredicted RBP16.96■□□□□ 0.31
PRKCSH-217ENST00000592741 AGO3Q9H9G7 860 aaKnown RBP16.96■□□□□ 0.31
PRKCSH-217ENST00000592741 DMAP1Q9NPF5 467 aaPredicted RBP16.96■□□□□ 0.31
PRKCSH-217ENST00000592741 MARCOQ9UEW3 520 aaPredicted RBP16.96■□□□□ 0.31
PRKCSH-217ENST00000592741 DSEQ9UL01 958 aa16.96■□□□□ 0.31
PRKCSH-217ENST00000592741 USP1O94782 785 aa16.96■□□□□ 0.3
PRKCSH-217ENST00000592741 LRIG2O94898 1065 aa16.96■□□□□ 0.3
PRKCSH-217ENST00000592741 PGK1P00558 417 aa16.96■□□□□ 0.3
PRKCSH-217ENST00000592741 BDNFP23560 247 aa16.96■□□□□ 0.3
PRKCSH-217ENST00000592741 TYK2P29597 1187 aa16.96■□□□□ 0.3
PRKCSH-217ENST00000592741 CD68P34810 354 aaPredicted RBP16.96■□□□□ 0.3
PRKCSH-217ENST00000592741 AQP5P55064 265 aa16.96■□□□□ 0.3
PRKCSH-217ENST00000592741 RPL10AP62906 217 aaKnown RBP16.96■□□□□ 0.3
PRKCSH-217ENST00000592741 ZBTB17Q13105 803 aa16.96■□□□□ 0.3
PRKCSH-217ENST00000592741 SMAD1Q15797 465 aaKnown RBP16.96■□□□□ 0.3
PRKCSH-217ENST00000592741 KCTD11Q693B1 232 aa16.96■□□□□ 0.3
PRKCSH-217ENST00000592741 DCLRE1AQ6PJP8 1040 aa16.96■□□□□ 0.3
PRKCSH-217ENST00000592741 RPAINQ86UA6 219 aa16.96■□□□□ 0.3
PRKCSH-217ENST00000592741 SCML4Q8N228 414 aa16.96■□□□□ 0.3
PRKCSH-217ENST00000592741 FCRL3Q96P31 734 aaPredicted RBP16.96■□□□□ 0.3
PRKCSH-217ENST00000592741 UPF3AQ9H1J1 476 aaKnown RBP16.96■□□□□ 0.3
PRKCSH-217ENST00000592741 SDAD1Q9NVU7 687 aaKnown RBP eCLIP16.96■□□□□ 0.31e-6■□□□□ 10.9
PRKCSH-217ENST00000592741 IL1RAPL1Q9NZN1 696 aa16.96■□□□□ 0.3
PRKCSH-217ENST00000592741 PPARGC1AQ9UBK2 798 aaKnown RBP16.96■□□□□ 0.3
PRKCSH-217ENST00000592741 ZNF623O75123 536 aa16.95■□□□□ 0.3
PRKCSH-217ENST00000592741 B3GAT3O94766 335 aa16.95■□□□□ 0.3
PRKCSH-217ENST00000592741 GSRP00390 522 aa16.95■□□□□ 0.3
PRKCSH-217ENST00000592741 CYP11A1P05108 521 aa16.95■□□□□ 0.3
PRKCSH-217ENST00000592741 CYBAP13498 195 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms