RNA–Protein interactions for RNA: ENST00000592106.5

VMP1-214, Transcript of vacuole membrane protein 1, humanhuman

TSL 5

Gene VMP1, Length 341 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-214ENST00000592106 THAP9Q9H5L6 903 aa10.5□□□□□ -0.73
VMP1-214ENST00000592106 C6orf106Q9H6K1 298 aaPredicted RBP10.5□□□□□ -0.73
VMP1-214ENST00000592106 TM9SF3Q9HD45 589 aa10.5□□□□□ -0.73
VMP1-214ENST00000592106 KIAA1522Q9P206 1035 aaPredicted RBP10.5□□□□□ -0.73
VMP1-214ENST00000592106 PCOLCE2Q9UKZ9 415 aa10.5□□□□□ -0.73
VMP1-214ENST00000592106 CNTN6Q9UQ52 1028 aa10.5□□□□□ -0.73
VMP1-214ENST00000592106 GTF3C3Q9Y5Q9 886 aa10.5□□□□□ -0.73
VMP1-214ENST00000592106 EDDM13A0A1B0GTR0 161 aa10.49□□□□□ -0.73
VMP1-214ENST00000592106 A0A1B0GVT2 93 aa10.49□□□□□ -0.73
VMP1-214ENST00000592106 TARSL2A2RTX5 802 aaKnown RBP10.49□□□□□ -0.73
VMP1-214ENST00000592106 FAM221BA6H8Z2 402 aa10.49□□□□□ -0.73
VMP1-214ENST00000592106 LRRC72A6NJI9 287 aa10.49□□□□□ -0.73
VMP1-214ENST00000592106 GOLGA8CPA6NN73 597 aa10.49□□□□□ -0.73
VMP1-214ENST00000592106 DFNA5O60443 496 aa10.49□□□□□ -0.73
VMP1-214ENST00000592106 SLC2A3P11169 496 aa10.49□□□□□ -0.73
VMP1-214ENST00000592106 TACR2P21452 398 aa10.49□□□□□ -0.73
VMP1-214ENST00000592106 CD27P26842 260 aa10.49□□□□□ -0.73
VMP1-214ENST00000592106 GRK6P43250 576 aa10.49□□□□□ -0.73
VMP1-214ENST00000592106 RPL34P49207 117 aaKnown RBP10.49□□□□□ -0.73
VMP1-214ENST00000592106 C21orf59P57076 290 aa10.49□□□□□ -0.73
VMP1-214ENST00000592106 RPS24P62847 133 aaKnown RBP10.49□□□□□ -0.73
VMP1-214ENST00000592106 FAM193AP78312 1265 aa10.49□□□□□ -0.73
VMP1-214ENST00000592106 SULT2A1Q06520 285 aa10.49□□□□□ -0.73
VMP1-214ENST00000592106 CST6Q15828 149 aa10.49□□□□□ -0.73
VMP1-214ENST00000592106 HLA-BQ31612 363 aa10.49□□□□□ -0.73
VMP1-214ENST00000592106 DCAF6Q58WW2 860 aa10.49□□□□□ -0.73
VMP1-214ENST00000592106 PITRM1Q5JRX3 1037 aa10.49□□□□□ -0.73
VMP1-214ENST00000592106 RABGAP1LQ5R372 815 aa10.49□□□□□ -0.73
VMP1-214ENST00000592106 KIAA0895LQ68EN5 471 aa10.49□□□□□ -0.73
VMP1-214ENST00000592106 NADSYN1Q6IA69 706 aa10.49□□□□□ -0.73
VMP1-214ENST00000592106 DENND1BQ6P3S1 775 aa10.49□□□□□ -0.73
VMP1-214ENST00000592106 GBP6Q6ZN66 633 aa10.49□□□□□ -0.73
VMP1-214ENST00000592106 DHX40Q8IX18 779 aaKnown RBP10.49□□□□□ -0.73
VMP1-214ENST00000592106 LGI2Q8N0V4 545 aa10.49□□□□□ -0.73
VMP1-214ENST00000592106 IGSF8Q969P0 613 aa10.49□□□□□ -0.73
VMP1-214ENST00000592106 BIRC7Q96CA5 298 aa10.49□□□□□ -0.73
VMP1-214ENST00000592106 SLC39A13Q96H72 371 aa10.49□□□□□ -0.73
VMP1-214ENST00000592106 KREMEN1Q96MU8 473 aa10.49□□□□□ -0.73
VMP1-214ENST00000592106 CAMK1GQ96NX5 476 aa10.49□□□□□ -0.73
VMP1-214ENST00000592106 ACE2Q9BYF1 805 aaPredicted RBP10.49□□□□□ -0.73
VMP1-214ENST00000592106 NUCKS1Q9H1E3 243 aaKnown RBP10.49□□□□□ -0.73
VMP1-214ENST00000592106 RSPH9Q9H1X1 276 aaPredicted RBP10.49□□□□□ -0.73
VMP1-214ENST00000592106 FAM204AQ9H8W3 233 aa10.49□□□□□ -0.73
VMP1-214ENST00000592106 UBE2TQ9NPD8 197 aaPredicted RBP10.49□□□□□ -0.73
VMP1-214ENST00000592106 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.49□□□□□ -0.73
VMP1-214ENST00000592106 FZD4Q9ULV1 537 aa10.49□□□□□ -0.73
VMP1-214ENST00000592106 NAALADL1Q9UQQ1 740 aa10.49□□□□□ -0.73
VMP1-214ENST00000592106 FNDC3AQ9Y2H6 1198 aaKnown RBP10.49□□□□□ -0.73
VMP1-214ENST00000592106 ITIH6Q6UXX5 1313 aa10.49□□□□□ -0.73
VMP1-214ENST00000592106 A0A1B0GVM2 712 aa10.48□□□□□ -0.73
VMP1-214ENST00000592106 TCAF2A6NFQ2 919 aa10.48□□□□□ -0.73
VMP1-214ENST00000592106 FAM47DPA6NHR8 397 aa10.48□□□□□ -0.73
VMP1-214ENST00000592106 E5RJQ4 531 aa10.48□□□□□ -0.73
VMP1-214ENST00000592106 YKT6O15498 198 aa10.48□□□□□ -0.73
VMP1-214ENST00000592106 SIN3BO75182 1162 aa10.48□□□□□ -0.73
VMP1-214ENST00000592106 TRUB2O95900 331 aaKnown RBP10.48□□□□□ -0.73
VMP1-214ENST00000592106 ADH1BP00325 375 aa10.48□□□□□ -0.73
VMP1-214ENST00000592106 CALCAP01258 141 aa10.48□□□□□ -0.73
VMP1-214ENST00000592106 GLI1P08151 1106 aa10.48□□□□□ -0.73
VMP1-214ENST00000592106 ABCB4P21439 1286 aa10.48□□□□□ -0.73
VMP1-214ENST00000592106 USP8P40818 1118 aa10.48□□□□□ -0.73
VMP1-214ENST00000592106 CSNK1EP49674 416 aaKnown RBP10.48□□□□□ -0.73
VMP1-214ENST00000592106 YWHAZP63104 245 aaKnown RBP10.48□□□□□ -0.73
VMP1-214ENST00000592106 RACK1P63244 317 aaKnown RBP10.48□□□□□ -0.73
VMP1-214ENST00000592106 CDK17Q00537 523 aa10.48□□□□□ -0.73
VMP1-214ENST00000592106 ECT2LQ008S8 904 aa10.48□□□□□ -0.73
VMP1-214ENST00000592106 PDCLQ13371 301 aa10.48□□□□□ -0.73
VMP1-214ENST00000592106 ARID5BQ14865 1188 aa10.48□□□□□ -0.73
VMP1-214ENST00000592106 TPD52L1Q16890 204 aaPredicted RBP10.48□□□□□ -0.73
VMP1-214ENST00000592106 SLC45A4Q5BKX6 768 aa10.48□□□□□ -0.73
VMP1-214ENST00000592106 EFHC1Q5JVL4 640 aa10.48□□□□□ -0.73
VMP1-214ENST00000592106 RAP1GAP2Q684P5 730 aa10.48□□□□□ -0.73
VMP1-214ENST00000592106 DSG4Q86SJ6 1040 aa10.48□□□□□ -0.73
VMP1-214ENST00000592106 CREBRFQ8IUR6 639 aa10.48□□□□□ -0.73
VMP1-214ENST00000592106 SCUBE3Q8IX30 993 aa10.48□□□□□ -0.73
VMP1-214ENST00000592106 ADAM32Q8TC27 787 aa10.48□□□□□ -0.73
VMP1-214ENST00000592106 RHBDD1Q8TEB9 315 aa10.48□□□□□ -0.73
VMP1-214ENST00000592106 ZNF606Q8WXB4 792 aa10.48□□□□□ -0.73
VMP1-214ENST00000592106 RNF34Q969K3 372 aa10.48□□□□□ -0.73
VMP1-214ENST00000592106 IL21RQ9HBE5 538 aa10.48□□□□□ -0.73
VMP1-214ENST00000592106 ASNSD1Q9NWL6 643 aa10.48□□□□□ -0.73
VMP1-214ENST00000592106 FBXL12Q9NXK8 326 aa10.48□□□□□ -0.73
VMP1-214ENST00000592106 RWDD2AQ9UIY3 292 aa10.48□□□□□ -0.73
VMP1-214ENST00000592106 SLC25A13Q9UJS0 675 aa10.48□□□□□ -0.73
VMP1-214ENST00000592106 ERVW-1Q9UQF0 538 aa10.48□□□□□ -0.73
VMP1-214ENST00000592106 ANKRD6Q9Y2G4 727 aa10.48□□□□□ -0.73
VMP1-214ENST00000592106 GON4LQ3T8J9 2241 aa10.48□□□□□ -0.73
VMP1-214ENST00000592106 MAP1BP46821 2468 aaKnown RBP10.47□□□□□ -0.73
VMP1-214ENST00000592106 A0A1W2PP55 124 aa10.47□□□□□ -0.73
VMP1-214ENST00000592106 GTPBP10A4D1E9 387 aaKnown RBP10.47□□□□□ -0.73
VMP1-214ENST00000592106 SRRM3A6NNA2 597 aaPredicted RBP10.47□□□□□ -0.73
VMP1-214ENST00000592106 MID1O15344 667 aa10.47□□□□□ -0.73
VMP1-214ENST00000592106 PAPSS1O43252 624 aaPredicted RBP10.47□□□□□ -0.73
VMP1-214ENST00000592106 HSF2BPO75031 334 aa10.47□□□□□ -0.73
VMP1-214ENST00000592106 CBFA2T3O75081 653 aa10.47□□□□□ -0.73
VMP1-214ENST00000592106 RNASEH2AO75792 299 aaKnown RBP10.47□□□□□ -0.73
VMP1-214ENST00000592106 FYNP06241 537 aa10.47□□□□□ -0.73
VMP1-214ENST00000592106 BMP6P22004 513 aa10.47□□□□□ -0.73
VMP1-214ENST00000592106 CCR1P32246 355 aa10.47□□□□□ -0.73
VMP1-214ENST00000592106 MTIF2P46199 727 aaKnown RBP10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms