RNA–Protein interactions for RNA: ENST00000591709.1

POLR2E-208, Transcript of RNA polymerase II subunit E, humanhuman

TSL 2

Gene POLR2E, Length 685 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2E-208ENST00000591709 RSPH9Q9H1X1 276 aaPredicted RBP17.59■□□□□ 0.41
POLR2E-208ENST00000591709 MID1O15344 667 aa17.58■□□□□ 0.4
POLR2E-208ENST00000591709 SLC28A2O43868 658 aa17.58■□□□□ 0.4
POLR2E-208ENST00000591709 KRT10P13645 584 aa17.58■□□□□ 0.4
POLR2E-208ENST00000591709 C6P13671 934 aa17.58■□□□□ 0.4
POLR2E-208ENST00000591709 CKMT2P17540 419 aa17.58■□□□□ 0.4
POLR2E-208ENST00000591709 SGSHP51688 502 aa17.58■□□□□ 0.4
POLR2E-208ENST00000591709 PDE4CQ08493 712 aa17.58■□□□□ 0.4
POLR2E-208ENST00000591709 INCA1Q0VD86 236 aa17.58■□□□□ 0.4
POLR2E-208ENST00000591709 PAK1Q13153 545 aa17.58■□□□□ 0.4
POLR2E-208ENST00000591709 CBWD6Q4V339 395 aa17.58■□□□□ 0.4
POLR2E-208ENST00000591709 PKDCCQ504Y2 493 aa17.58■□□□□ 0.4
POLR2E-208ENST00000591709 CBWD3Q5JTY5 395 aa17.58■□□□□ 0.4
POLR2E-208ENST00000591709 CBWD5Q5RIA9 395 aa17.58■□□□□ 0.4
POLR2E-208ENST00000591709 PPP1R26Q5T8A7 1209 aaPredicted RBP17.58■□□□□ 0.4
POLR2E-208ENST00000591709 CLEC17AQ6ZS10 378 aa17.58■□□□□ 0.4
POLR2E-208ENST00000591709 DDX51Q8N8A6 666 aaKnown RBP eCLIP17.58■□□□□ 0.47e-7■■□□□ 13.2
POLR2E-208ENST00000591709 FBXL13Q8NEE6 735 aa17.58■□□□□ 0.4
POLR2E-208ENST00000591709 WFDC5Q8TCV5 224 aa17.58■□□□□ 0.4
POLR2E-208ENST00000591709 CEP63Q96MT8 703 aa17.58■□□□□ 0.4
POLR2E-208ENST00000591709 NT5C1AQ9BXI3 368 aa17.58■□□□□ 0.4
POLR2E-208ENST00000591709 DUSP16Q9BY84 665 aa17.58■□□□□ 0.4
POLR2E-208ENST00000591709 NIF3L1Q9GZT8 377 aa17.58■□□□□ 0.4
POLR2E-208ENST00000591709 CLSTN2Q9H4D0 955 aa17.58■□□□□ 0.4
POLR2E-208ENST00000591709 RAB20Q9NX57 234 aa17.58■□□□□ 0.4
POLR2E-208ENST00000591709 ADAMTS1Q9UHI8 967 aa17.58■□□□□ 0.4
POLR2E-208ENST00000591709 LRRC72A6NJI9 287 aa17.57■□□□□ 0.4
POLR2E-208ENST00000591709 RNASEH2AO75792 299 aaKnown RBP17.57■□□□□ 0.4
POLR2E-208ENST00000591709 MPOP05164 745 aa17.57■□□□□ 0.4
POLR2E-208ENST00000591709 ATP5BP06576 529 aaKnown RBP17.57■□□□□ 0.4
POLR2E-208ENST00000591709 CD58P19256 250 aa17.57■□□□□ 0.4
POLR2E-208ENST00000591709 CD70P32970 193 aa17.57■□□□□ 0.4
POLR2E-208ENST00000591709 UCNP55089 124 aa17.57■□□□□ 0.4
POLR2E-208ENST00000591709 NXPH1P58417 271 aa17.57■□□□□ 0.4
POLR2E-208ENST00000591709 YWHAGP61981 247 aaKnown RBP eCLIP17.57■□□□□ 0.4
POLR2E-208ENST00000591709 KANSL1Q7Z3B3 1105 aa17.57■□□□□ 0.4
POLR2E-208ENST00000591709 TTC9Q92623 222 aa17.57■□□□□ 0.4
POLR2E-208ENST00000591709 SLC35C1Q96A29 364 aa17.57■□□□□ 0.4
POLR2E-208ENST00000591709 SERAC1Q96JX3 654 aa17.57■□□□□ 0.4
POLR2E-208ENST00000591709 NEUROG2Q9H2A3 272 aa17.57■□□□□ 0.4
POLR2E-208ENST00000591709 CYP3A43Q9HB55 503 aa17.57■□□□□ 0.4
POLR2E-208ENST00000591709 METTL14Q9HCE5 456 aaKnown RBP17.57■□□□□ 0.4
POLR2E-208ENST00000591709 SUN2Q9UH99 717 aa17.57■□□□□ 0.4
POLR2E-208ENST00000591709 SCML1Q9UN30 329 aa17.57■□□□□ 0.4
POLR2E-208ENST00000591709 SDC3O75056 442 aa17.56■□□□□ 0.4
POLR2E-208ENST00000591709 SIN3BO75182 1162 aa17.56■□□□□ 0.4
POLR2E-208ENST00000591709 MT-CO3P00414 261 aa17.56■□□□□ 0.4
POLR2E-208ENST00000591709 POLR2EP19388 210 aaKnown RBP17.56■□□□□ 0.4
POLR2E-208ENST00000591709 ACP1P24666 158 aa17.56■□□□□ 0.4
POLR2E-208ENST00000591709 HARS2P49590 506 aaKnown RBP17.56■□□□□ 0.4
POLR2E-208ENST00000591709 TRIP4Q15650 581 aaPredicted RBP17.56■□□□□ 0.4
POLR2E-208ENST00000591709 CST6Q15828 149 aa17.56■□□□□ 0.4
POLR2E-208ENST00000591709 KIAA0907Q7Z7F0 614 aaPredicted RBP17.56■□□□□ 0.4
POLR2E-208ENST00000591709 DHX40Q8IX18 779 aaKnown RBP17.56■□□□□ 0.4
POLR2E-208ENST00000591709 CACTIN-AS1Q8N1I8 211 aa17.56■□□□□ 0.4
POLR2E-208ENST00000591709 ARHGAP18Q8N392 663 aa17.56■□□□□ 0.4
POLR2E-208ENST00000591709 OR2T34Q8NGX1 318 aa17.56■□□□□ 0.4
POLR2E-208ENST00000591709 TMA16Q96EY4 203 aaKnown RBP17.56■□□□□ 0.4
POLR2E-208ENST00000591709 MYO19Q96H55 970 aa17.56■□□□□ 0.4
POLR2E-208ENST00000591709 HIC2Q96JB3 615 aa17.56■□□□□ 0.4
POLR2E-208ENST00000591709 GBP4Q96PP9 640 aa17.56■□□□□ 0.4
POLR2E-208ENST00000591709 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.56■□□□□ 0.4
POLR2E-208ENST00000591709 LMBRD1Q9NUN5 540 aa17.56■□□□□ 0.4
POLR2E-208ENST00000591709 RP1P56715 2156 aa17.55■□□□□ 0.4
POLR2E-208ENST00000591709 TLR4O00206 839 aa17.55■□□□□ 0.4
POLR2E-208ENST00000591709 RNASEH1O60930 286 aaKnown RBP17.55■□□□□ 0.4
POLR2E-208ENST00000591709 WISP1O95388 367 aa17.55■□□□□ 0.4
POLR2E-208ENST00000591709 GABREP78334 506 aa17.55■□□□□ 0.4
POLR2E-208ENST00000591709 PROX2Q3B8N5 592 aa17.55■□□□□ 0.4
POLR2E-208ENST00000591709 SLC45A4Q5BKX6 768 aa17.55■□□□□ 0.4
POLR2E-208ENST00000591709 FOXR2Q6PJQ5 311 aa17.55■□□□□ 0.4
POLR2E-208ENST00000591709 SPATS2Q86XZ4 545 aaKnown RBP17.55■□□□□ 0.4
POLR2E-208ENST00000591709 MMAAQ8IVH4 418 aaKnown RBP17.55■□□□□ 0.4
POLR2E-208ENST00000591709 OXR1Q8N573 874 aa17.55■□□□□ 0.4
POLR2E-208ENST00000591709 KCNE4Q8WWG9 221 aa17.55■□□□□ 0.4
POLR2E-208ENST00000591709 TATDN2Q93075 761 aa17.55■□□□□ 0.4
POLR2E-208ENST00000591709 ZNF578Q96N58 590 aaPredicted RBP17.55■□□□□ 0.4
POLR2E-208ENST00000591709 OMDQ99983 421 aa17.55■□□□□ 0.4
POLR2E-208ENST00000591709 SRRTQ9BXP5 876 aaKnown RBP17.55■□□□□ 0.4
POLR2E-208ENST00000591709 NUP62CLQ9H1M0 184 aa17.55■□□□□ 0.4
POLR2E-208ENST00000591709 KLK10O43240 276 aa17.54■□□□□ 0.4
POLR2E-208ENST00000591709 RXRGP48443 463 aa17.54■□□□□ 0.4
POLR2E-208ENST00000591709 PSMD8P48556 350 aa17.54■□□□□ 0.4
POLR2E-208ENST00000591709 CCR5P51681 352 aa17.54■□□□□ 0.4
POLR2E-208ENST00000591709 ADPRHP54922 357 aa17.54■□□□□ 0.4
POLR2E-208ENST00000591709 ZNF445P59923 1031 aa17.54■□□□□ 0.4
POLR2E-208ENST00000591709 PPP2CBP62714 309 aa17.54■□□□□ 0.4
POLR2E-208ENST00000591709 PPP2CAP67775 309 aa17.54■□□□□ 0.4
POLR2E-208ENST00000591709 ZNF394Q53GI3 561 aa17.54■□□□□ 0.4
POLR2E-208ENST00000591709 PRICKLE2Q7Z3G6 844 aa17.54■□□□□ 0.4
POLR2E-208ENST00000591709 PIGZQ86VD9 579 aa17.54■□□□□ 0.4
POLR2E-208ENST00000591709 NDRG1Q92597 394 aaKnown RBP17.54■□□□□ 0.4
POLR2E-208ENST00000591709 ERVMER34-1Q9H9K5 563 aa17.54■□□□□ 0.4
POLR2E-208ENST00000591709 SFMBT1Q9UHJ3 866 aa17.54■□□□□ 0.4
POLR2E-208ENST00000591709 FZD4Q9ULV1 537 aa17.54■□□□□ 0.4
POLR2E-208ENST00000591709 COQ4Q9Y3A0 265 aa17.54■□□□□ 0.4
POLR2E-208ENST00000591709 C10orf142B7Z368 130 aa17.53■□□□□ 0.4
POLR2E-208ENST00000591709 MSI1O43347 362 aaKnown RBP17.53■□□□□ 0.4
POLR2E-208ENST00000591709 SIGLEC6O43699 453 aa17.53■□□□□ 0.4
POLR2E-208ENST00000591709 FMO5P49326 533 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms