RNA–Protein interactions for RNA: ENST00000591471.5

HKR1-223, Transcript of HKR1, GLI-Kruppel zinc finger family member, human

TSL 2 BASIC

Gene HKR1, Length 3,472 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HKR1-223	ENST00000591471	MTPAP	Q9NVV4	582 aa	Known RBP eCLIP	7.78	□□□□□ -1.16
HKR1-223	ENST00000591471	USP15	Q9Y4E8	981 aa	Predicted RBP	7.78	□□□□□ -1.16
HKR1-223	ENST00000591471	YIPF1	Q9Y548	306 aa		7.78	□□□□□ -1.16
HKR1-223	ENST00000591471	ANAPC1	Q9H1A4	1944 aa		7.78	□□□□□ -1.16
HKR1-223	ENST00000591471	KCNU1	A8MYU2	1149 aa		7.77	□□□□□ -1.16
HKR1-223	ENST00000591471	NT5C1B-RDH14	C9J2C7	533 aa		7.77	□□□□□ -1.16
HKR1-223	ENST00000591471	TEX28	O15482	410 aa		7.77	□□□□□ -1.16
HKR1-223	ENST00000591471	IRAK2	O43187	625 aa		7.77	□□□□□ -1.16
HKR1-223	ENST00000591471	LPXN	O60711	386 aa		7.77	□□□□□ -1.16
HKR1-223	ENST00000591471	PIAS1	O75925	651 aa		7.77	□□□□□ -1.16
HKR1-223	ENST00000591471	TMEM63A	O94886	807 aa		7.77	□□□□□ -1.16
HKR1-223	ENST00000591471	FOXN2	P32314	431 aa		7.77	□□□□□ -1.16
HKR1-223	ENST00000591471	ALDH1A3	P47895	512 aa		7.77	□□□□□ -1.16
HKR1-223	ENST00000591471	ARL4C	P56559	192 aa		7.77	□□□□□ -1.16
HKR1-223	ENST00000591471	EFTUD2	Q15029	972 aa	Known RBP eCLIP	7.77	□□□□□ -1.16
HKR1-223	ENST00000591471	LRIT3	Q3SXY7	679 aa		7.77	□□□□□ -1.16
HKR1-223	ENST00000591471	ARL13B	Q3SXY8	428 aa		7.77	□□□□□ -1.16
HKR1-223	ENST00000591471	BSPRY	Q5W0U4	402 aa		7.77	□□□□□ -1.16
HKR1-223	ENST00000591471	SLC9A4	Q6AI14	798 aa		7.77	□□□□□ -1.16
HKR1-223	ENST00000591471	PPP1R21	Q6ZMI0	780 aa		7.77	□□□□□ -1.16
HKR1-223	ENST00000591471	TRPM8	Q7Z2W7	1104 aa		7.77	□□□□□ -1.16
HKR1-223	ENST00000591471	TDH	Q8IZJ6	230 aa		7.77	□□□□□ -1.16
HKR1-223	ENST00000591471	DEFB106A	Q8N104	65 aa		7.77	□□□□□ -1.16
HKR1-223	ENST00000591471	C4orf33	Q8N1A6	199 aa		7.77	□□□□□ -1.16
HKR1-223	ENST00000591471	STKLD1	Q8NE28	680 aa		7.77	□□□□□ -1.16
HKR1-223	ENST00000591471	PYROXD1	Q8WU10	500 aa		7.77	□□□□□ -1.16
HKR1-223	ENST00000591471	FAM172A	Q8WUF8	416 aa		7.77	□□□□□ -1.16
HKR1-223	ENST00000591471	WDR83	Q9BRX9	315 aa	Known RBP	7.77	□□□□□ -1.16
HKR1-223	ENST00000591471	BRD8	Q9H0E9	1235 aa		7.77	□□□□□ -1.16
HKR1-223	ENST00000591471	GPATCH2L	Q9NWQ4	482 aa		7.77	□□□□□ -1.16
HKR1-223	ENST00000591471	ABI2	Q9NYB9	513 aa	Predicted RBP	7.77	□□□□□ -1.16
HKR1-223	ENST00000591471	DONSON	Q9NYP3	566 aa		7.77	□□□□□ -1.16
HKR1-223	ENST00000591471	RABGEF1	Q9UJ41	708 aa		7.77	□□□□□ -1.16
HKR1-223	ENST00000591471	ZMYND8	Q9ULU4	1186 aa	Predicted RBP	7.77	□□□□□ -1.16
HKR1-223	ENST00000591471	YJEFN3	A6XGL0	299 aa		7.77	□□□□□ -1.17
HKR1-223	ENST00000591471		E7ENQ6	273 aa		7.77	□□□□□ -1.17
HKR1-223	ENST00000591471	PRPSAP2	O60256	369 aa		7.77	□□□□□ -1.17
HKR1-223	ENST00000591471	RASSF9	O75901	435 aa		7.77	□□□□□ -1.17
HKR1-223	ENST00000591471	NR2C2	P49116	596 aa		7.77	□□□□□ -1.17
HKR1-223	ENST00000591471	BASP1	P80723	227 aa	Known RBP	7.77	□□□□□ -1.17
HKR1-223	ENST00000591471	NR1H3	Q13133	447 aa		7.77	□□□□□ -1.17
HKR1-223	ENST00000591471	XRCC4	Q13426	336 aa		7.77	□□□□□ -1.17
HKR1-223	ENST00000591471	DPYSL3	Q14195	570 aa		7.77	□□□□□ -1.17
HKR1-223	ENST00000591471	TRIP4	Q15650	581 aa	Predicted RBP	7.77	□□□□□ -1.17
HKR1-223	ENST00000591471	SCYL2	Q6P3W7	929 aa		7.77	□□□□□ -1.17
HKR1-223	ENST00000591471	DARS2	Q6PI48	645 aa	Known RBP	7.77	□□□□□ -1.17
HKR1-223	ENST00000591471	C1orf228	Q6PIY5	440 aa		7.77	□□□□□ -1.17
HKR1-223	ENST00000591471	C4orf22	Q6V702	233 aa		7.77	□□□□□ -1.17
HKR1-223	ENST00000591471	FAM217A	Q8IXS0	508 aa		7.77	□□□□□ -1.17
HKR1-223	ENST00000591471	HAUS2	Q9NVX0	235 aa		7.77	□□□□□ -1.17
HKR1-223	ENST00000591471	XPO7	Q9UIA9	1087 aa	Known RBP	7.77	□□□□□ -1.17
HKR1-223	ENST00000591471	ZNF510	Q9Y2H8	683 aa		7.77	□□□□□ -1.17
HKR1-223	ENST00000591471		A0A1W2PPM1	405 aa		7.77	□□□□□ -1.17
HKR1-223	ENST00000591471	SEC24A	O95486	1093 aa		7.77	□□□□□ -1.17
HKR1-223	ENST00000591471	CXCL14	O95715	111 aa		7.77	□□□□□ -1.17
HKR1-223	ENST00000591471	CNP	P09543	421 aa	Known RBP	7.77	□□□□□ -1.17
HKR1-223	ENST00000591471	TAC1	P20366	129 aa		7.77	□□□□□ -1.17
HKR1-223	ENST00000591471	L1CAM	P32004	1257 aa		7.77	□□□□□ -1.17
HKR1-223	ENST00000591471	TFDP2	Q14188	446 aa		7.77	□□□□□ -1.17
HKR1-223	ENST00000591471	DUSP6	Q16828	381 aa		7.77	□□□□□ -1.17
HKR1-223	ENST00000591471	BBS9	Q3SYG4	887 aa		7.77	□□□□□ -1.17
HKR1-223	ENST00000591471	FAM133B	Q5BKY9	247 aa	Known RBP	7.77	□□□□□ -1.17
HKR1-223	ENST00000591471	ZC3H12A	Q5D1E8	599 aa	Known RBP	7.77	□□□□□ -1.17
HKR1-223	ENST00000591471	C9orf50	Q5SZB4	431 aa		7.77	□□□□□ -1.17
HKR1-223	ENST00000591471	SYCP2L	Q5T4T6	812 aa		7.77	□□□□□ -1.17
HKR1-223	ENST00000591471	RNF43	Q68DV7	783 aa		7.77	□□□□□ -1.17
HKR1-223	ENST00000591471	CGB2	Q6NT52	195 aa		7.77	□□□□□ -1.17
HKR1-223	ENST00000591471	BZW1	Q7L1Q6	419 aa	Known RBP	7.77	□□□□□ -1.17
HKR1-223	ENST00000591471	TNS4	Q8IZW8	715 aa		7.77	□□□□□ -1.17
HKR1-223	ENST00000591471	FBXO36	Q8NEA4	188 aa		7.77	□□□□□ -1.17
HKR1-223	ENST00000591471	POF1B	Q8WVV4	589 aa		7.77	□□□□□ -1.17
HKR1-223	ENST00000591471	SGSM3	Q96HU1	749 aa		7.77	□□□□□ -1.17
HKR1-223	ENST00000591471	CRISPLD1	Q9H336	500 aa		7.77	□□□□□ -1.17
HKR1-223	ENST00000591471	FAM120A	Q9NZB2	1118 aa	Known RBP eCLIP	7.77	□□□□□ -1.17
HKR1-223	ENST00000591471	IGLV3-10	A0A075B6K4	115 aa		7.76	□□□□□ -1.17
HKR1-223	ENST00000591471	LCHN	A4D1U4	455 aa		7.76	□□□□□ -1.17
HKR1-223	ENST00000591471	TGM5	O43548	720 aa		7.76	□□□□□ -1.17
HKR1-223	ENST00000591471	CLASP2	O75122	1294 aa	Known RBP	7.76	□□□□□ -1.17
HKR1-223	ENST00000591471	SUN1	O94901	812 aa		7.76	□□□□□ -1.17
HKR1-223	ENST00000591471	ASMTL	O95671	621 aa		7.76	□□□□□ -1.17
HKR1-223	ENST00000591471	USP17L7	P0C7H9	530 aa		7.76	□□□□□ -1.17
HKR1-223	ENST00000591471	SYN1	P17600	705 aa		7.76	□□□□□ -1.17
HKR1-223	ENST00000591471	CDC25C	P30307	473 aa		7.76	□□□□□ -1.17
HKR1-223	ENST00000591471	SULT1E1	P49888	294 aa		7.76	□□□□□ -1.17
HKR1-223	ENST00000591471	IL9R	Q01113	521 aa		7.76	□□□□□ -1.17
HKR1-223	ENST00000591471	TNK2	Q07912	1038 aa		7.76	□□□□□ -1.17
HKR1-223	ENST00000591471	CAMK1	Q14012	370 aa		7.76	□□□□□ -1.17
HKR1-223	ENST00000591471	KRT81	Q14533	505 aa		7.76	□□□□□ -1.17
HKR1-223	ENST00000591471	NOMO1	Q15155	1222 aa		7.76	□□□□□ -1.17
HKR1-223	ENST00000591471	EFHC2	Q5JST6	749 aa		7.76	□□□□□ -1.17
HKR1-223	ENST00000591471	MANEAL	Q5VSG8	457 aa		7.76	□□□□□ -1.17
HKR1-223	ENST00000591471	ARMC3	Q5W041	872 aa		7.76	□□□□□ -1.17
HKR1-223	ENST00000591471	BTBD8	Q5XKL5	378 aa		7.76	□□□□□ -1.17
HKR1-223	ENST00000591471	GPR153	Q6NV75	609 aa		7.76	□□□□□ -1.17
HKR1-223	ENST00000591471	C3orf62	Q6ZUJ4	267 aa		7.76	□□□□□ -1.17
HKR1-223	ENST00000591471	SPATA21	Q7Z572	469 aa		7.76	□□□□□ -1.17
HKR1-223	ENST00000591471	LRRC49	Q8IUZ0	686 aa		7.76	□□□□□ -1.17
HKR1-223	ENST00000591471	ATP11C	Q8NB49	1132 aa		7.76	□□□□□ -1.17
HKR1-223	ENST00000591471	DENND1A	Q8TEH3	1009 aa		7.76	□□□□□ -1.17
HKR1-223	ENST00000591471	CLEC4C	Q8WTT0	213 aa		7.76	□□□□□ -1.17

Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms