RNA–Protein interactions for RNA: ENST00000591383.1

VPS4B-205, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 5

Gene VPS4B, Length 701 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-205ENST00000591383 ZDHHC11BP0C7U3 371 aa6.66□□□□□ -1.34
VPS4B-205ENST00000591383 FAM228BP0C875 321 aa6.66□□□□□ -1.34
VPS4B-205ENST00000591383 UNGP13051 313 aaPredicted RBP6.66□□□□□ -1.34
VPS4B-205ENST00000591383 RRM1P23921 792 aa6.66□□□□□ -1.34
VPS4B-205ENST00000591383 GDI1P31150 447 aa6.66□□□□□ -1.34
VPS4B-205ENST00000591383 HNRNPH3P31942 346 aaKnown RBP6.66□□□□□ -1.34
VPS4B-205ENST00000591383 IFNAR2P48551 515 aa6.66□□□□□ -1.34
VPS4B-205ENST00000591383 VCPP55072 806 aaKnown RBP6.66□□□□□ -1.34
VPS4B-205ENST00000591383 GSDMDP57764 484 aa6.66□□□□□ -1.34
VPS4B-205ENST00000591383 SLC6A3Q01959 620 aa6.66□□□□□ -1.34
VPS4B-205ENST00000591383 NME3Q13232 169 aa6.66□□□□□ -1.34
VPS4B-205ENST00000591383 MTF1Q14872 753 aa6.66□□□□□ -1.34
VPS4B-205ENST00000591383 TAF5Q15542 800 aa6.66□□□□□ -1.34
VPS4B-205ENST00000591383 ZNF77Q15935 545 aa6.66□□□□□ -1.34
VPS4B-205ENST00000591383 CDO1Q16878 200 aa6.66□□□□□ -1.34
VPS4B-205ENST00000591383 C2orf27AQ580R0 203 aa6.66□□□□□ -1.34
VPS4B-205ENST00000591383 DCAF6Q58WW2 860 aa6.66□□□□□ -1.34
VPS4B-205ENST00000591383 EFHC1Q5JVL4 640 aa6.66□□□□□ -1.34
VPS4B-205ENST00000591383 CCDC122Q5T0U0 273 aa6.66□□□□□ -1.34
VPS4B-205ENST00000591383 PM20D1Q6GTS8 502 aa6.66□□□□□ -1.34
VPS4B-205ENST00000591383 TANGO2Q6ICL3 276 aa6.66□□□□□ -1.34
VPS4B-205ENST00000591383 ACAD10Q6JQN1 1059 aa6.66□□□□□ -1.34
VPS4B-205ENST00000591383 PPP1R2P3Q6NXS1 205 aa6.66□□□□□ -1.34
VPS4B-205ENST00000591383 CC2D1AQ6P1N0 951 aaPredicted RBP6.66□□□□□ -1.34
VPS4B-205ENST00000591383 MSANTD2Q6P1R3 559 aa6.66□□□□□ -1.34
VPS4B-205ENST00000591383 DCUN1D2Q6PH85 259 aa6.66□□□□□ -1.34
VPS4B-205ENST00000591383 VITQ6UXI7 678 aa6.66□□□□□ -1.34
VPS4B-205ENST00000591383 SLC26A9Q7LBE3 791 aa6.66□□□□□ -1.34
VPS4B-205ENST00000591383 TMEM110Q86TL2 294 aa6.66□□□□□ -1.34
VPS4B-205ENST00000591383 DDX42Q86XP3 938 aaKnown RBP eCLIP6.66□□□□□ -1.34
VPS4B-205ENST00000591383 PHF13Q86YI8 300 aaPredicted RBP6.66□□□□□ -1.34
VPS4B-205ENST00000591383 ZDHHC17Q8IUH5 632 aa6.66□□□□□ -1.34
VPS4B-205ENST00000591383 ZDHHC14Q8IZN3 488 aa6.66□□□□□ -1.34
VPS4B-205ENST00000591383 SCML4Q8N228 414 aa6.66□□□□□ -1.34
VPS4B-205ENST00000591383 VWA5B2Q8N398 1253 aa6.66□□□□□ -1.34
VPS4B-205ENST00000591383 CELF5Q8N6W0 485 aaKnown RBP6.66□□□□□ -1.34
VPS4B-205ENST00000591383 EMC1Q8N766 993 aa6.66□□□□□ -1.34
VPS4B-205ENST00000591383 C3orf20Q8ND61 904 aa6.66□□□□□ -1.34
VPS4B-205ENST00000591383 JOSD2Q8TAC2 188 aa6.66□□□□□ -1.34
VPS4B-205ENST00000591383 RIN3Q8TB24 985 aa6.66□□□□□ -1.34
VPS4B-205ENST00000591383 THAP3Q8WTV1 239 aaPredicted RBP6.66□□□□□ -1.34
VPS4B-205ENST00000591383 TTC9Q92623 222 aa6.66□□□□□ -1.34
VPS4B-205ENST00000591383 TRIM11Q96F44 468 aa6.66□□□□□ -1.34
VPS4B-205ENST00000591383 ZFYVE19Q96K21 471 aa6.66□□□□□ -1.34
VPS4B-205ENST00000591383 PANX2Q96RD6 677 aa6.66□□□□□ -1.34
VPS4B-205ENST00000591383 CYP2S1Q96SQ9 504 aa6.66□□□□□ -1.34
VPS4B-205ENST00000591383 CHP1Q99653 195 aa6.66□□□□□ -1.34
VPS4B-205ENST00000591383 SMOC2Q9H3U7 446 aa6.66□□□□□ -1.34
VPS4B-205ENST00000591383 NHEJ1Q9H9Q4 299 aaPredicted RBP6.66□□□□□ -1.34
VPS4B-205ENST00000591383 POPDC2Q9HBU9 364 aa6.66□□□□□ -1.34
VPS4B-205ENST00000591383 ABCC13Q9NSE7 274 aa6.66□□□□□ -1.34
VPS4B-205ENST00000591383 TDP1Q9NUW8 608 aa6.66□□□□□ -1.34
VPS4B-205ENST00000591383 DDIT4Q9NX09 232 aa6.66□□□□□ -1.34
VPS4B-205ENST00000591383 CLIC5Q9NZA1 410 aa6.66□□□□□ -1.34
VPS4B-205ENST00000591383 IMPACTQ9P2X3 320 aa6.66□□□□□ -1.34
VPS4B-205ENST00000591383 CNOT8Q9UFF9 292 aaKnown RBP6.66□□□□□ -1.34
VPS4B-205ENST00000591383 SFMBT1Q9UHJ3 866 aa6.66□□□□□ -1.34
VPS4B-205ENST00000591383 MUTYHQ9UIF7 546 aa6.66□□□□□ -1.34
VPS4B-205ENST00000591383 LSM7Q9UK45 103 aaKnown RBP6.66□□□□□ -1.34
VPS4B-205ENST00000591383 STAP1Q9ULZ2 295 aa6.66□□□□□ -1.34
VPS4B-205ENST00000591383 ARHGAP26Q9UNA1 814 aa6.66□□□□□ -1.34
VPS4B-205ENST00000591383 NAALADL1Q9UQQ1 740 aa6.66□□□□□ -1.34
VPS4B-205ENST00000591383 WNT6Q9Y6F9 365 aa6.66□□□□□ -1.34
VPS4B-205ENST00000591383 KIAA1549LQ6ZVL6 1849 aa6.66□□□□□ -1.34
VPS4B-205ENST00000591383 MIA3Q5JRA6 1907 aa6.66□□□□□ -1.34
VPS4B-205ENST00000591383 SSU72P8A0A1W2PR75 194 aa6.65□□□□□ -1.34
VPS4B-205ENST00000591383 H3BRJ5 948 aa6.65□□□□□ -1.34
VPS4B-205ENST00000591383 IRAK2O43187 625 aa6.65□□□□□ -1.34
VPS4B-205ENST00000591383 NARSO43776 548 aaKnown RBP6.65□□□□□ -1.34
VPS4B-205ENST00000591383 NRDCO43847 1150 aa6.65□□□□□ -1.34
VPS4B-205ENST00000591383 RTN2O75298 545 aa6.65□□□□□ -1.34
VPS4B-205ENST00000591383 ECI2O75521 394 aa6.65□□□□□ -1.34
VPS4B-205ENST00000591383 HTR3BO95264 441 aa6.65□□□□□ -1.34
VPS4B-205ENST00000591383 OLFM2O95897 454 aa6.65□□□□□ -1.34
VPS4B-205ENST00000591383 APOEP02649 317 aa6.65□□□□□ -1.34
VPS4B-205ENST00000591383 GLI1P08151 1106 aa6.65□□□□□ -1.34
VPS4B-205ENST00000591383 MYBL1P10243 752 aa6.65□□□□□ -1.34
VPS4B-205ENST00000591383 DESP17661 470 aa6.65□□□□□ -1.34
VPS4B-205ENST00000591383 PFKLP17858 780 aa6.65□□□□□ -1.34
VPS4B-205ENST00000591383 CORO1AP31146 461 aaKnown RBP6.65□□□□□ -1.34
VPS4B-205ENST00000591383 SDC4P31431 198 aa6.65□□□□□ -1.34
VPS4B-205ENST00000591383 CYLC1P35663 651 aaPredicted RBP6.65□□□□□ -1.34
VPS4B-205ENST00000591383 ATP5C1P36542 298 aaKnown RBP6.65□□□□□ -1.34
VPS4B-205ENST00000591383 FLT3P36888 993 aa6.65□□□□□ -1.34
VPS4B-205ENST00000591383 GABRB2P47870 512 aa6.65□□□□□ -1.34
VPS4B-205ENST00000591383 RPL34P49207 117 aaKnown RBP6.65□□□□□ -1.34
VPS4B-205ENST00000591383 YWHAZP63104 245 aaKnown RBP6.65□□□□□ -1.34
VPS4B-205ENST00000591383 PITX1P78337 314 aaPredicted RBP6.65□□□□□ -1.34
VPS4B-205ENST00000591383 SLC7A9P82251 487 aa6.65□□□□□ -1.34
VPS4B-205ENST00000591383 CDK17Q00537 523 aa6.65□□□□□ -1.34
VPS4B-205ENST00000591383 GSTM4Q03013 218 aa6.65□□□□□ -1.34
VPS4B-205ENST00000591383 PTP4A2Q12974 167 aa6.65□□□□□ -1.34
VPS4B-205ENST00000591383 ZNF268Q14587 947 aaPredicted RBP6.65□□□□□ -1.34
VPS4B-205ENST00000591383 SPA17Q15506 151 aa6.65□□□□□ -1.34
VPS4B-205ENST00000591383 SLC18A3Q16572 532 aa6.65□□□□□ -1.34
VPS4B-205ENST00000591383 SNX30Q5VWJ9 437 aa6.65□□□□□ -1.34
VPS4B-205ENST00000591383 TRIM68Q6AZZ1 485 aa6.65□□□□□ -1.34
VPS4B-205ENST00000591383 PSAPL1Q6NUJ1 521 aa6.65□□□□□ -1.34
VPS4B-205ENST00000591383 ALKBH5Q6P6C2 394 aaKnown RBP6.65□□□□□ -1.34
VPS4B-205ENST00000591383 C6orf15Q6UXA7 325 aaPredicted RBP6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms