RNA–Protein interactions for RNA: ENST00000591239.1

DNMT1-223, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-223ENST00000591239 WDR59Q6PJI9 974 aa9.48□□□□□ -0.89
DNMT1-223ENST00000591239 C11orf74Q86VG3 221 aa9.48□□□□□ -0.89
DNMT1-223ENST00000591239 ZNF683Q8IZ20 524 aa9.48□□□□□ -0.89
DNMT1-223ENST00000591239 FRMD1Q8N878 549 aa9.48□□□□□ -0.89
DNMT1-223ENST00000591239 RNF214Q8ND24 703 aa9.48□□□□□ -0.89
DNMT1-223ENST00000591239 CPLX3Q8WVH0 158 aa9.48□□□□□ -0.89
DNMT1-223ENST00000591239 CENPIQ92674 756 aaPredicted RBP9.48□□□□□ -0.89
DNMT1-223ENST00000591239 SYN2Q92777 582 aaPredicted RBP9.48□□□□□ -0.89
DNMT1-223ENST00000591239 TTC17Q96AE7 1141 aa9.48□□□□□ -0.89
DNMT1-223ENST00000591239 IQCDQ96DY2 449 aa9.48□□□□□ -0.89
DNMT1-223ENST00000591239 LOXL4Q96JB6 756 aa9.48□□□□□ -0.89
DNMT1-223ENST00000591239 SPACA7Q96KW9 195 aa9.48□□□□□ -0.89
DNMT1-223ENST00000591239 MRGPRX1Q96LB2 322 aa9.48□□□□□ -0.89
DNMT1-223ENST00000591239 C1orf74Q96LT6 269 aa9.48□□□□□ -0.89
DNMT1-223ENST00000591239 HAPLN3Q96S86 360 aa9.48□□□□□ -0.89
DNMT1-223ENST00000591239 XPO4Q9C0E2 1151 aaKnown RBP9.48□□□□□ -0.89
DNMT1-223ENST00000591239 MKRN2Q9H000 416 aaKnown RBP9.48□□□□□ -0.89
DNMT1-223ENST00000591239 RAB6CQ9H0N0 254 aa9.48□□□□□ -0.89
DNMT1-223ENST00000591239 DUSP15Q9H1R2 295 aaPredicted RBP9.48□□□□□ -0.89
DNMT1-223ENST00000591239 SLC6A17Q9H1V8 727 aa9.48□□□□□ -0.89
DNMT1-223ENST00000591239 TMEM245Q9H330 911 aa9.48□□□□□ -0.89
DNMT1-223ENST00000591239 TMPRSS4Q9NRS4 437 aa9.48□□□□□ -0.89
DNMT1-223ENST00000591239 CAPN11Q9UMQ6 739 aa9.48□□□□□ -0.89
DNMT1-223ENST00000591239 SNX10Q9Y5X0 201 aa9.48□□□□□ -0.89
DNMT1-223ENST00000591239 DNAH14Q0VDD8 3507 aa9.48□□□□□ -0.89
DNMT1-223ENST00000591239 SPAG17Q6Q759 2223 aa9.47□□□□□ -0.89
DNMT1-223ENST00000591239 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP9.47□□□□□ -0.89
DNMT1-223ENST00000591239 ANKRD62A6NC57 917 aa9.47□□□□□ -0.89
DNMT1-223ENST00000591239 DRGXA6NNA5 263 aa9.47□□□□□ -0.89
DNMT1-223ENST00000591239 DDX3XO00571 662 aaKnown RBP eCLIP9.47□□□□□ -0.89
DNMT1-223ENST00000591239 CBFA2T2O43439 604 aa9.47□□□□□ -0.89
DNMT1-223ENST00000591239 LRP3O75074 770 aa9.47□□□□□ -0.89
DNMT1-223ENST00000591239 CLDN11O75508 207 aa9.47□□□□□ -0.89
DNMT1-223ENST00000591239 CNTN5O94779 1100 aa9.47□□□□□ -0.89
DNMT1-223ENST00000591239 RHOBTB1O94844 696 aa9.47□□□□□ -0.89
DNMT1-223ENST00000591239 MOCS3O95396 460 aa9.47□□□□□ -0.89
DNMT1-223ENST00000591239 FTLP02792 175 aaPredicted RBP9.47□□□□□ -0.89
DNMT1-223ENST00000591239 ASLP04424 464 aa9.47□□□□□ -0.89
DNMT1-223ENST00000591239 GYPCP04921 128 aa9.47□□□□□ -0.89
DNMT1-223ENST00000591239 GZMAP12544 262 aa9.47□□□□□ -0.89
DNMT1-223ENST00000591239 GPD1P21695 349 aa9.47□□□□□ -0.89
DNMT1-223ENST00000591239 BCKDHBP21953 392 aa9.47□□□□□ -0.89
DNMT1-223ENST00000591239 TGM1P22735 817 aa9.47□□□□□ -0.89
DNMT1-223ENST00000591239 RRM1P23921 792 aa9.47□□□□□ -0.89
DNMT1-223ENST00000591239 MZF1P28698 734 aaPredicted RBP9.47□□□□□ -0.89
DNMT1-223ENST00000591239 ADRA1BP35368 520 aa9.47□□□□□ -0.89
DNMT1-223ENST00000591239 CDH4P55283 916 aa9.47□□□□□ -0.89
DNMT1-223ENST00000591239 OXCT1P55809 520 aa9.47□□□□□ -0.89
DNMT1-223ENST00000591239 HDAC4P56524 1084 aa9.47□□□□□ -0.89
DNMT1-223ENST00000591239 ST8SIA6P61647 398 aa9.47□□□□□ -0.89
DNMT1-223ENST00000591239 RPL7AP62424 266 aaKnown RBP9.47□□□□□ -0.89
DNMT1-223ENST00000591239 ECT2LQ008S8 904 aa9.47□□□□□ -0.89
DNMT1-223ENST00000591239 SPEM2Q0P670 501 aa9.47□□□□□ -0.89
DNMT1-223ENST00000591239 ZNF177Q13360 481 aaPredicted RBP9.47□□□□□ -0.89
DNMT1-223ENST00000591239 CAMK2GQ13555 558 aaPredicted RBP9.47□□□□□ -0.89
DNMT1-223ENST00000591239 MAP7D1Q3KQU3 841 aa9.47□□□□□ -0.89
DNMT1-223ENST00000591239 PLEKHG6Q3KR16 790 aa9.47□□□□□ -0.89
DNMT1-223ENST00000591239 ARL13BQ3SXY8 428 aa9.47□□□□□ -0.89
DNMT1-223ENST00000591239 PITRM1Q5JRX3 1037 aa9.47□□□□□ -0.89
DNMT1-223ENST00000591239 PPP1R15BQ5SWA1 713 aa9.47□□□□□ -0.89
DNMT1-223ENST00000591239 ARTNQ5T4W7 220 aa9.47□□□□□ -0.89
DNMT1-223ENST00000591239 HGSNATQ68CP4 663 aa9.47□□□□□ -0.89
DNMT1-223ENST00000591239 CXorf57Q6NSI4 855 aaKnown RBP9.47□□□□□ -0.89
DNMT1-223ENST00000591239 LRRC31Q6UY01 552 aa9.47□□□□□ -0.89
DNMT1-223ENST00000591239 STRADAQ7RTN6 431 aa9.47□□□□□ -0.89
DNMT1-223ENST00000591239 DNAAF5Q86Y56 855 aa9.47□□□□□ -0.89
DNMT1-223ENST00000591239 TMPRSS6Q8IU80 811 aa9.47□□□□□ -0.89
DNMT1-223ENST00000591239 KIAA2013Q8IYS2 634 aa9.47□□□□□ -0.89
DNMT1-223ENST00000591239 APCDD1Q8J025 514 aa9.47□□□□□ -0.89
DNMT1-223ENST00000591239 GPR161Q8N6U8 529 aaKnown RBP9.47□□□□□ -0.89
DNMT1-223ENST00000591239 ZNF366Q8N895 744 aa9.47□□□□□ -0.89
DNMT1-223ENST00000591239 FAM172AQ8WUF8 416 aa9.47□□□□□ -0.89
DNMT1-223ENST00000591239 MCEEQ96PE7 176 aa9.47□□□□□ -0.89
DNMT1-223ENST00000591239 PRDM16Q9HAZ2 1276 aa9.47□□□□□ -0.89
DNMT1-223ENST00000591239 MBD1Q9UIS9 605 aaPredicted RBP9.47□□□□□ -0.89
DNMT1-223ENST00000591239 LUC7L2Q9Y383 392 aaKnown RBP9.47□□□□□ -0.89
DNMT1-223ENST00000591239 BZW2Q9Y6E2 419 aaKnown RBP9.47□□□□□ -0.89
DNMT1-223ENST00000591239 ITIH6Q6UXX5 1313 aa9.47□□□□□ -0.89
DNMT1-223ENST00000591239 ABCA7Q8IZY2 2146 aa9.47□□□□□ -0.89
DNMT1-223ENST00000591239 IGLV3-10A0A075B6K4 115 aa9.46□□□□□ -0.9
DNMT1-223ENST00000591239 E9PAM4 449 aa9.46□□□□□ -0.9
DNMT1-223ENST00000591239 MAP3K13O43283 966 aa9.46□□□□□ -0.9
DNMT1-223ENST00000591239 SRGAP2O75044 1071 aa9.46□□□□□ -0.9
DNMT1-223ENST00000591239 RTN2O75298 545 aa9.46□□□□□ -0.9
DNMT1-223ENST00000591239 ZNF217O75362 1048 aa9.46□□□□□ -0.9
DNMT1-223ENST00000591239 SERPING1P05155 500 aa9.46□□□□□ -0.9
DNMT1-223ENST00000591239 CASP14P31944 242 aa9.46□□□□□ -0.9
DNMT1-223ENST00000591239 CTSOP43234 321 aaPredicted RBP9.46□□□□□ -0.9
DNMT1-223ENST00000591239 NUMBP49757 651 aa9.46□□□□□ -0.9
DNMT1-223ENST00000591239 ZNF143P52747 638 aaPredicted RBP9.46□□□□□ -0.9
DNMT1-223ENST00000591239 PLK1P53350 603 aa9.46□□□□□ -0.9
DNMT1-223ENST00000591239 COPAP53621 1224 aa9.46□□□□□ -0.9
DNMT1-223ENST00000591239 MAMLD1Q13495 774 aa9.46□□□□□ -0.9
DNMT1-223ENST00000591239 ALFQ53S48 1182 aa9.46□□□□□ -0.9
DNMT1-223ENST00000591239 TDRD12Q587J7 1177 aaKnown RBP9.46□□□□□ -0.9
DNMT1-223ENST00000591239 PMS2CLQ68D20 193 aa9.46□□□□□ -0.9
DNMT1-223ENST00000591239 DCUN1D2Q6PH85 259 aa9.46□□□□□ -0.9
DNMT1-223ENST00000591239 KIAA1324Q6UXG2 1013 aaKnown RBP9.46□□□□□ -0.9
DNMT1-223ENST00000591239 LPCAT2Q7L5N7 544 aa9.46□□□□□ -0.9
DNMT1-223ENST00000591239 METTL3Q86U44 580 aaKnown RBP9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms