RNA–Protein interactions for RNA: ENST00000590830.5

MBD3-208, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 1 (best)

Gene MBD3, Length 1,035 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-208ENST00000590830 CENPIQ92674 756 aaPredicted RBP23.05■■□□□ 1.28
MBD3-208ENST00000590830 ALG14Q96F25 216 aa23.05■■□□□ 1.28
MBD3-208ENST00000590830 C1orf74Q96LT6 269 aa23.05■■□□□ 1.28
MBD3-208ENST00000590830 IFNKQ9P0W0 207 aa23.05■■□□□ 1.28
MBD3-208ENST00000590830 USP18Q9UMW8 372 aa23.05■■□□□ 1.28
MBD3-208ENST00000590830 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa23.04■■□□□ 1.28
MBD3-208ENST00000590830 IGHV1OR15-9A0A0B4J2B8 117 aa23.04■■□□□ 1.28
MBD3-208ENST00000590830 A0A1B0GVM2 712 aa23.04■■□□□ 1.28
MBD3-208ENST00000590830 TCAF2A6NFQ2 919 aa23.04■■□□□ 1.28
MBD3-208ENST00000590830 SIGLEC16A6NMB1 481 aa23.04■■□□□ 1.28
MBD3-208ENST00000590830 DRGXA6NNA5 263 aa23.04■■□□□ 1.28
MBD3-208ENST00000590830 ZBTB24O43167 697 aaPredicted RBP23.04■■□□□ 1.28
MBD3-208ENST00000590830 SKILP12757 684 aa23.04■■□□□ 1.28
MBD3-208ENST00000590830 NFKBIBQ15653 356 aa23.04■■□□□ 1.28
MBD3-208ENST00000590830 CSRP2Q16527 193 aa23.04■■□□□ 1.28
MBD3-208ENST00000590830 PLEKHG6Q3KR16 790 aa23.04■■□□□ 1.28
MBD3-208ENST00000590830 ALFQ53S48 1182 aa23.04■■□□□ 1.28
MBD3-208ENST00000590830 PLA2G2CQ5R387 149 aa23.04■■□□□ 1.28
MBD3-208ENST00000590830 PPP1R15BQ5SWA1 713 aa23.04■■□□□ 1.28
MBD3-208ENST00000590830 TTC39BQ5VTQ0 682 aaPredicted RBP23.04■■□□□ 1.28
MBD3-208ENST00000590830 KIAA1324Q6UXG2 1013 aaKnown RBP23.04■■□□□ 1.28
MBD3-208ENST00000590830 CCDC117Q8IWD4 279 aaPredicted RBP23.04■■□□□ 1.28
MBD3-208ENST00000590830 TMEFF1Q8IYR6 380 aa23.04■■□□□ 1.28
MBD3-208ENST00000590830 SMOC1Q9H4F8 434 aa23.04■■□□□ 1.28
MBD3-208ENST00000590830 PRDM16Q9HAZ2 1276 aa23.04■■□□□ 1.28
MBD3-208ENST00000590830 TMEM51Q9NW97 253 aa23.04■■□□□ 1.28
MBD3-208ENST00000590830 CYP8B1Q9UNU6 501 aa23.04■■□□□ 1.28
MBD3-208ENST00000590830 DYNC1LI1Q9Y6G9 523 aaKnown RBP23.04■■□□□ 1.28
MBD3-208ENST00000590830 DMXL1Q9Y485 3027 aa23.04■■□□□ 1.28
MBD3-208ENST00000590830 MAP3K13O43283 966 aa23.03■■□□□ 1.28
MBD3-208ENST00000590830 RRM1P23921 792 aa23.03■■□□□ 1.28
MBD3-208ENST00000590830 SDC4P31431 198 aa23.03■■□□□ 1.28
MBD3-208ENST00000590830 PTPN9P43378 593 aa23.03■■□□□ 1.28
MBD3-208ENST00000590830 PLK1P53350 603 aa23.03■■□□□ 1.28
MBD3-208ENST00000590830 BYSLQ13895 437 aaKnown RBP23.03■■□□□ 1.28
MBD3-208ENST00000590830 CDO1Q16878 200 aa23.03■■□□□ 1.28
MBD3-208ENST00000590830 METTL3Q86U44 580 aaKnown RBP23.03■■□□□ 1.28
MBD3-208ENST00000590830 SPACA7Q96KW9 195 aa23.03■■□□□ 1.28
MBD3-208ENST00000590830 HAPLN3Q96S86 360 aa23.03■■□□□ 1.28
MBD3-208ENST00000590830 SELENOOQ9BVL4 669 aa23.03■■□□□ 1.28
MBD3-208ENST00000590830 MAGEB5Q9BZ81 275 aa23.03■■□□□ 1.28
MBD3-208ENST00000590830 PRSS16Q9NQE7 514 aa23.03■■□□□ 1.28
MBD3-208ENST00000590830 SLCO3A1Q9UIG8 710 aa23.03■■□□□ 1.28
MBD3-208ENST00000590830 ERVW-1Q9UQF0 538 aa23.03■■□□□ 1.28
MBD3-208ENST00000590830 PAXBP1Q9Y5B6 917 aa23.03■■□□□ 1.28
MBD3-208ENST00000590830 PCDHGA5Q9Y5G8 931 aa23.03■■□□□ 1.28
MBD3-208ENST00000590830 OR51B4Q9Y5P0 310 aa23.03■■□□□ 1.28
MBD3-208ENST00000590830 MUC22E2RYF6 1773 aaPredicted RBP23.03■■□□□ 1.28
MBD3-208ENST00000590830 BCLAF3A2AJT9 711 aaKnown RBP23.02■■□□□ 1.28
MBD3-208ENST00000590830 TMCO5BA8MYB1 307 aa23.02■■□□□ 1.28
MBD3-208ENST00000590830 DDX3XO00571 662 aaKnown RBP eCLIP23.02■■□□□ 1.282e-7■■■□□ 16
MBD3-208ENST00000590830 ASLP04424 464 aa23.02■■□□□ 1.28
MBD3-208ENST00000590830 C7P10643 843 aa23.02■■□□□ 1.28
MBD3-208ENST00000590830 PTGER3P43115 390 aa23.02■■□□□ 1.28
MBD3-208ENST00000590830 HDAC4P56524 1084 aa23.02■■□□□ 1.28
MBD3-208ENST00000590830 RPL7AP62424 266 aaKnown RBP23.02■■□□□ 1.28
MBD3-208ENST00000590830 DEFB119Q8N690 84 aa23.02■■□□□ 1.28
MBD3-208ENST00000590830 NUP58Q9BVL2 599 aa23.02■■□□□ 1.28
MBD3-208ENST00000590830 ITM2CQ9NQX7 267 aa23.02■■□□□ 1.28
MBD3-208ENST00000590830 TBC1D30Q9Y2I9 924 aa23.02■■□□□ 1.28
MBD3-208ENST00000590830 SPAG17Q6Q759 2223 aa23.02■■□□□ 1.28
MBD3-208ENST00000590830 IGLV3-10A0A075B6K4 115 aa23.01■■□□□ 1.27
MBD3-208ENST00000590830 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP23.01■■□□□ 1.27
MBD3-208ENST00000590830 A0A1W2PQJ5 194 aa23.01■■□□□ 1.27
MBD3-208ENST00000590830 ZNF217O75362 1048 aa23.01■■□□□ 1.27
MBD3-208ENST00000590830 CLDN11O75508 207 aa23.01■■□□□ 1.27
MBD3-208ENST00000590830 GPD1P21695 349 aa23.01■■□□□ 1.27
MBD3-208ENST00000590830 ADRA1BP35368 520 aa23.01■■□□□ 1.27
MBD3-208ENST00000590830 MPLP40238 635 aa23.01■■□□□ 1.27
MBD3-208ENST00000590830 CDH4P55283 916 aa23.01■■□□□ 1.27
MBD3-208ENST00000590830 ECT2LQ008S8 904 aa23.01■■□□□ 1.27
MBD3-208ENST00000590830 CREB5Q02930 508 aa23.01■■□□□ 1.27
MBD3-208ENST00000590830 KLHL30Q0D2K2 578 aa23.01■■□□□ 1.27
MBD3-208ENST00000590830 ZNF177Q13360 481 aaPredicted RBP23.01■■□□□ 1.27
MBD3-208ENST00000590830 SLC12A1Q13621 1099 aa23.01■■□□□ 1.27
MBD3-208ENST00000590830 SF3A2Q15428 464 aaKnown RBP23.01■■□□□ 1.27
MBD3-208ENST00000590830 HGSNATQ68CP4 663 aa23.01■■□□□ 1.27
MBD3-208ENST00000590830 DNAJC24Q6P3W2 148 aa23.01■■□□□ 1.27
MBD3-208ENST00000590830 LRSAM1Q6UWE0 723 aa23.01■■□□□ 1.27
MBD3-208ENST00000590830 PRR23CQ6ZRP0 262 aa23.01■■□□□ 1.27
MBD3-208ENST00000590830 LPCAT2Q7L5N7 544 aa23.01■■□□□ 1.27
MBD3-208ENST00000590830 STRADAQ7RTN6 431 aa23.01■■□□□ 1.27
MBD3-208ENST00000590830 OR2T3Q8NH03 318 aa23.01■■□□□ 1.27
MBD3-208ENST00000590830 CPLX3Q8WVH0 158 aa23.01■■□□□ 1.27
MBD3-208ENST00000590830 SIPA1Q96FS4 1042 aa23.01■■□□□ 1.27
MBD3-208ENST00000590830 FEM1AQ9BSK4 669 aa23.01■■□□□ 1.27
MBD3-208ENST00000590830 XPO4Q9C0E2 1151 aaKnown RBP23.01■■□□□ 1.27
MBD3-208ENST00000590830 TSPY26PQ9H489 355 aa23.01■■□□□ 1.27
MBD3-208ENST00000590830 MPP6Q9NZW5 540 aa23.01■■□□□ 1.27
MBD3-208ENST00000590830 USP36Q9P275 1121 aaKnown RBP23.01■■□□□ 1.27
MBD3-208ENST00000590830 TTC34A8MYJ7 566 aa23■■□□□ 1.27
MBD3-208ENST00000590830 E9PAM4 449 aa23■■□□□ 1.27
MBD3-208ENST00000590830 MOCS3O95396 460 aa23■■□□□ 1.27
MBD3-208ENST00000590830 ZNF806P0C7X5 589 aa23■■□□□ 1.27
MBD3-208ENST00000590830 DHPSP49366 369 aaPredicted RBP23■■□□□ 1.27
MBD3-208ENST00000590830 STK19P49842 368 aaPredicted RBP23■■□□□ 1.27
MBD3-208ENST00000590830 OGDHQ02218 1023 aa23■■□□□ 1.27
MBD3-208ENST00000590830 ARMCX6Q7L4S7 300 aa23■■□□□ 1.27
MBD3-208ENST00000590830 CACUL1Q86Y37 369 aa23■■□□□ 1.27
MBD3-208ENST00000590830 KDM1BQ8NB78 822 aa23■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms