RNA–Protein interactions for RNA: ENST00000590627.5

GCDH-213, Transcript of glutaryl-CoA dehydrogenase, humanhuman

TSL 1 (best)

Gene GCDH, Length 1,051 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-213ENST00000590627 BTN2A3PQ96KV6 586 aa17.14■□□□□ 0.33
GCDH-213ENST00000590627 C1orf74Q96LT6 269 aa17.14■□□□□ 0.33
GCDH-213ENST00000590627 GKN1Q9NS71 199 aa17.14■□□□□ 0.33
GCDH-213ENST00000590627 TDP1Q9NUW8 608 aa17.14■□□□□ 0.33
GCDH-213ENST00000590627 SLC12A6Q9UHW9 1150 aa17.14■□□□□ 0.33
GCDH-213ENST00000590627 SNX12Q9UMY4 172 aa17.14■□□□□ 0.33
GCDH-213ENST00000590627 AP4E1Q9UPM8 1137 aa17.14■□□□□ 0.33
GCDH-213ENST00000590627 CHURC1-FNTBB4DL54 471 aa17.13■□□□□ 0.33
GCDH-213ENST00000590627 HRO43593 1189 aa17.13■□□□□ 0.33
GCDH-213ENST00000590627 FNTBP49356 437 aa17.13■□□□□ 0.33
GCDH-213ENST00000590627 ZNF135P52742 658 aaPredicted RBP17.13■□□□□ 0.33
GCDH-213ENST00000590627 NRG1Q02297 640 aaPredicted RBP17.13■□□□□ 0.33
GCDH-213ENST00000590627 PON2Q15165 354 aa17.13■□□□□ 0.33
GCDH-213ENST00000590627 LPAL2Q16609 132 aa17.13■□□□□ 0.33
GCDH-213ENST00000590627 SMTNL2Q2TAL5 461 aa17.13■□□□□ 0.33
GCDH-213ENST00000590627 ITPRIPL2Q3MIP1 535 aa17.13■□□□□ 0.33
GCDH-213ENST00000590627 KCNT1Q5JUK3 1230 aa17.13■□□□□ 0.33
GCDH-213ENST00000590627 Q6ZNB5 142 aa17.13■□□□□ 0.33
GCDH-213ENST00000590627 HTR3DQ70Z44 454 aa17.13■□□□□ 0.33
GCDH-213ENST00000590627 RCOR2Q8IZ40 523 aa17.13■□□□□ 0.33
GCDH-213ENST00000590627 USP13Q92995 863 aaPredicted RBP17.13■□□□□ 0.33
GCDH-213ENST00000590627 DCLK3Q9C098 648 aa17.13■□□□□ 0.33
GCDH-213ENST00000590627 CARD9Q9H257 536 aa17.13■□□□□ 0.33
GCDH-213ENST00000590627 KIF9Q9HAQ2 790 aa17.13■□□□□ 0.33
GCDH-213ENST00000590627 STAU2Q9NUL3 570 aaKnown RBP eCLIP17.13■□□□□ 0.33
GCDH-213ENST00000590627 SMPD4Q9NXE4 827 aa17.13■□□□□ 0.33
GCDH-213ENST00000590627 STOML2Q9UJZ1 356 aa17.13■□□□□ 0.33
GCDH-213ENST00000590627 C3orf70A6NLC5 250 aaPredicted RBP17.12■□□□□ 0.33
GCDH-213ENST00000590627 ZNF487B1APH4 448 aa17.12■□□□□ 0.33
GCDH-213ENST00000590627 LEFTY2O00292 366 aa17.12■□□□□ 0.33
GCDH-213ENST00000590627 CES2O00748 559 aa17.12■□□□□ 0.33
GCDH-213ENST00000590627 FOXD2O60548 495 aaPredicted RBP17.12■□□□□ 0.33
GCDH-213ENST00000590627 PAGE1O75459 146 aa17.12■□□□□ 0.33
GCDH-213ENST00000590627 ZRANB2O95218 330 aaKnown RBP eCLIP17.12■□□□□ 0.33
GCDH-213ENST00000590627 KLKB1P03952 638 aa17.12■□□□□ 0.33
GCDH-213ENST00000590627 HMBSP08397 361 aa17.12■□□□□ 0.33
GCDH-213ENST00000590627 TCP1P17987 556 aaKnown RBP17.12■□□□□ 0.33
GCDH-213ENST00000590627 CORO1AP31146 461 aaKnown RBP17.12■□□□□ 0.33
GCDH-213ENST00000590627 L1CAMP32004 1257 aa17.12■□□□□ 0.33
GCDH-213ENST00000590627 SLC11A2P49281 568 aa17.12■□□□□ 0.33
GCDH-213ENST00000590627 AMPD2Q01433 879 aa17.12■□□□□ 0.33
GCDH-213ENST00000590627 TNK2Q07912 1038 aa17.12■□□□□ 0.33
GCDH-213ENST00000590627 DMWDQ09019 674 aa17.12■□□□□ 0.33
GCDH-213ENST00000590627 SEMA3BQ13214 749 aa17.12■□□□□ 0.33
GCDH-213ENST00000590627 PDK2Q15119 407 aa17.12■□□□□ 0.33
GCDH-213ENST00000590627 TAZQ16635 292 aa17.12■□□□□ 0.33
GCDH-213ENST00000590627 CA9Q16790 459 aa17.12■□□□□ 0.33
GCDH-213ENST00000590627 TTC8Q8TAM2 541 aa17.12■□□□□ 0.33
GCDH-213ENST00000590627 NETO1Q8TDF5 533 aa17.12■□□□□ 0.33
GCDH-213ENST00000590627 RAPGEF5Q92565 580 aa17.12■□□□□ 0.33
GCDH-213ENST00000590627 HSPH1Q92598 858 aa17.12■□□□□ 0.33
GCDH-213ENST00000590627 TMPRSS4Q9NRS4 437 aa17.12■□□□□ 0.33
GCDH-213ENST00000590627 ZNF510Q9Y2H8 683 aa17.12■□□□□ 0.33
GCDH-213ENST00000590627 TPRP12270 2363 aaKnown RBP17.11■□□□□ 0.33
GCDH-213ENST00000590627 E2F8A0AVK6 867 aa17.11■□□□□ 0.33
GCDH-213ENST00000590627 KCNK3O14649 394 aa17.11■□□□□ 0.33
GCDH-213ENST00000590627 ACSL4O60488 711 aa17.11■□□□□ 0.33
GCDH-213ENST00000590627 KRT1P04264 644 aa17.11■□□□□ 0.33
GCDH-213ENST00000590627 KDELR1P24390 212 aa17.11■□□□□ 0.33
GCDH-213ENST00000590627 HTR7P34969 479 aa17.11■□□□□ 0.33
GCDH-213ENST00000590627 GJC1P36383 396 aa17.11■□□□□ 0.33
GCDH-213ENST00000590627 HCAR3P49019 387 aa17.11■□□□□ 0.33
GCDH-213ENST00000590627 COPS2P61201 443 aa17.11■□□□□ 0.33
GCDH-213ENST00000590627 USP4Q13107 963 aa17.11■□□□□ 0.33
GCDH-213ENST00000590627 CSRP2Q16527 193 aa17.11■□□□□ 0.33
GCDH-213ENST00000590627 DCAF12L1Q5VU92 463 aa17.11■□□□□ 0.33
GCDH-213ENST00000590627 WDR5BQ86VZ2 330 aa17.11■□□□□ 0.33
GCDH-213ENST00000590627 MAP7D3Q8IWC1 876 aa17.11■□□□□ 0.33
GCDH-213ENST00000590627 KCTD6Q8NC69 237 aa17.11■□□□□ 0.33
GCDH-213ENST00000590627 KIF18AQ8NI77 898 aa17.11■□□□□ 0.33
GCDH-213ENST00000590627 SH3RF2Q8TEC5 729 aa17.11■□□□□ 0.33
GCDH-213ENST00000590627 TSC1Q92574 1164 aa17.11■□□□□ 0.33
GCDH-213ENST00000590627 WBP2Q969T9 261 aa17.11■□□□□ 0.33
GCDH-213ENST00000590627 RBM41Q96IZ5 413 aaKnown RBP17.11■□□□□ 0.33
GCDH-213ENST00000590627 PBKQ96KB5 322 aa17.11■□□□□ 0.33
GCDH-213ENST00000590627 FAM83CQ9BQN1 747 aa17.11■□□□□ 0.33
GCDH-213ENST00000590627 SMG9Q9H0W8 520 aaKnown RBP17.11■□□□□ 0.33
GCDH-213ENST00000590627 DHX35Q9H5Z1 703 aaKnown RBP17.11■□□□□ 0.33
GCDH-213ENST00000590627 PCDH18Q9HCL0 1135 aa17.11■□□□□ 0.33
GCDH-213ENST00000590627 SEMA4GQ9NTN9 838 aa17.11■□□□□ 0.33
GCDH-213ENST00000590627 GPATCH2LQ9NWQ4 482 aa17.11■□□□□ 0.33
GCDH-213ENST00000590627 CFAP97Q9P2B7 532 aa17.11■□□□□ 0.33
GCDH-213ENST00000590627 RCOR3Q9P2K3 495 aaPredicted RBP17.11■□□□□ 0.33
GCDH-213ENST00000590627 XPO7Q9UIA9 1087 aaKnown RBP17.11■□□□□ 0.33
GCDH-213ENST00000590627 LSM7Q9UK45 103 aaKnown RBP17.11■□□□□ 0.33
GCDH-213ENST00000590627 AGO1Q9UL18 857 aaKnown RBP17.11■□□□□ 0.33
GCDH-213ENST00000590627 CCL26Q9Y258 94 aa17.11■□□□□ 0.33
GCDH-213ENST00000590627 HS3ST4Q9Y661 456 aa17.11■□□□□ 0.33
GCDH-213ENST00000590627 SAR1BQ9Y6B6 198 aa17.11■□□□□ 0.33
GCDH-213ENST00000590627 RALGAPA1Q6GYQ0 2036 aa17.11■□□□□ 0.33
GCDH-213ENST00000590627 CCDC163A0A0D9SF12 145 aa17.1■□□□□ 0.33
GCDH-213ENST00000590627 LRRD1A4D1F6 860 aa17.1■□□□□ 0.33
GCDH-213ENST00000590627 MOCS2O96007 188 aaPredicted RBP17.1■□□□□ 0.33
GCDH-213ENST00000590627 PYGMP11217 842 aa17.1■□□□□ 0.33
GCDH-213ENST00000590627 PTPN7P35236 360 aa17.1■□□□□ 0.33
GCDH-213ENST00000590627 DNA2P51530 1060 aa17.1■□□□□ 0.33
GCDH-213ENST00000590627 CDH6P55285 790 aa17.1■□□□□ 0.33
GCDH-213ENST00000590627 RUNX3Q13761 415 aa17.1■□□□□ 0.33
GCDH-213ENST00000590627 ZNF77Q15935 545 aa17.1■□□□□ 0.33
GCDH-213ENST00000590627 PPP2R5EQ16537 467 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms