RNA–Protein interactions for RNA: ENST00000590574.5

SMARCA4-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 5,282 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-215ENST00000590574 IL1R2P27930 398 aa17.48■□□□□ 0.39
SMARCA4-215ENST00000590574 PIGZQ86VD9 579 aa17.48■□□□□ 0.39
SMARCA4-215ENST00000590574 GFM2Q969S9 779 aaKnown RBP17.48■□□□□ 0.39
SMARCA4-215ENST00000590574 VPS50Q96JG6 964 aa17.48■□□□□ 0.39
SMARCA4-215ENST00000590574 SDCBP2Q9H190 292 aa17.48■□□□□ 0.39
SMARCA4-215ENST00000590574 POMKQ9H5K3 350 aa17.48■□□□□ 0.39
SMARCA4-215ENST00000590574 PLCH1Q4KWH8 1693 aa17.48■□□□□ 0.39
SMARCA4-215ENST00000590574 HEATR9A2RTY3 570 aa17.48■□□□□ 0.39
SMARCA4-215ENST00000590574 IRF6O14896 467 aa17.48■□□□□ 0.39
SMARCA4-215ENST00000590574 TADA2AO75478 443 aa17.48■□□□□ 0.39
SMARCA4-215ENST00000590574 CCNB1P14635 433 aa17.48■□□□□ 0.39
SMARCA4-215ENST00000590574 XPAP23025 273 aaPredicted RBP17.48■□□□□ 0.39
SMARCA4-215ENST00000590574 PRKAA2P54646 552 aa17.48■□□□□ 0.39
SMARCA4-215ENST00000590574 CMC1Q7Z7K0 106 aa17.48■□□□□ 0.39
SMARCA4-215ENST00000590574 BHLHE22Q8NFJ8 381 aaPredicted RBP17.48■□□□□ 0.39
SMARCA4-215ENST00000590574 SH3TC2Q8TF17 1288 aa17.48■□□□□ 0.39
SMARCA4-215ENST00000590574 MAP4P27816 1152 aaKnown RBP17.47■□□□□ 0.39
SMARCA4-215ENST00000590574 CHSY1Q86X52 802 aa17.47■□□□□ 0.39
SMARCA4-215ENST00000590574 NAT8LQ8N9F0 302 aa17.47■□□□□ 0.39
SMARCA4-215ENST00000590574 ADAM28Q9UKQ2 775 aa17.47■□□□□ 0.39
SMARCA4-215ENST00000590574 ZNF711Q9Y462 761 aa17.47■□□□□ 0.39
SMARCA4-215ENST00000590574 CNTNAP2Q9UHC6 1331 aa17.47■□□□□ 0.39
SMARCA4-215ENST00000590574 PAPSS1O43252 624 aaPredicted RBP17.47■□□□□ 0.39
SMARCA4-215ENST00000590574 CRABP2P29373 138 aa17.47■□□□□ 0.39
SMARCA4-215ENST00000590574 ALDH1A3P47895 512 aa17.47■□□□□ 0.39
SMARCA4-215ENST00000590574 NRLP54845 237 aa17.47■□□□□ 0.39
SMARCA4-215ENST00000590574 MAPRE1Q15691 268 aaKnown RBP17.47■□□□□ 0.39
SMARCA4-215ENST00000590574 SH3PXD2AQ5TCZ1 1133 aa17.47■□□□□ 0.39
SMARCA4-215ENST00000590574 NIPA2Q8N8Q9 360 aa17.47■□□□□ 0.39
SMARCA4-215ENST00000590574 TRAPPC9Q96Q05 1148 aa17.47■□□□□ 0.39
SMARCA4-215ENST00000590574 SEPT5Q99719 369 aaPredicted RBP17.47■□□□□ 0.39
SMARCA4-215ENST00000590574 BCLAF3A2AJT9 711 aaKnown RBP17.47■□□□□ 0.39
SMARCA4-215ENST00000590574 NCF1BA6NI72 391 aaPredicted RBP17.47■□□□□ 0.39
SMARCA4-215ENST00000590574 NCF1CA8MVU1 366 aaPredicted RBP17.47■□□□□ 0.39
SMARCA4-215ENST00000590574 STRNO43815 780 aa17.47■□□□□ 0.39
SMARCA4-215ENST00000590574 NCF1P14598 390 aaPredicted RBP17.47■□□□□ 0.39
SMARCA4-215ENST00000590574 NAGLUP54802 743 aa17.47■□□□□ 0.39
SMARCA4-215ENST00000590574 C10orf120Q5SQS8 335 aa17.47■□□□□ 0.39
SMARCA4-215ENST00000590574 FAM182AQ5T1J6 154 aa17.47■□□□□ 0.39
SMARCA4-215ENST00000590574 PLEKHH3Q7Z736 793 aa17.47■□□□□ 0.39
SMARCA4-215ENST00000590574 SLC41A1Q8IVJ1 513 aa17.47■□□□□ 0.39
SMARCA4-215ENST00000590574 HSFY1Q96LI6 401 aa17.47■□□□□ 0.39
SMARCA4-215ENST00000590574 STN1Q9H668 368 aaKnown RBP17.47■□□□□ 0.39
SMARCA4-215ENST00000590574 CDHR5Q9HBB8 845 aa17.47■□□□□ 0.39
SMARCA4-215ENST00000590574 PYGLP06737 847 aa17.47■□□□□ 0.39
SMARCA4-215ENST00000590574 ICAM3P32942 547 aa17.47■□□□□ 0.39
SMARCA4-215ENST00000590574 FASTKQ14296 549 aaKnown RBP17.47■□□□□ 0.39
SMARCA4-215ENST00000590574 MFSD14CQ5VZR4 134 aa17.47■□□□□ 0.39
SMARCA4-215ENST00000590574 MRNIPQ6NTE8 343 aa17.47■□□□□ 0.39
SMARCA4-215ENST00000590574 DCP1BQ8IZD4 617 aaKnown RBP17.47■□□□□ 0.39
SMARCA4-215ENST00000590574 KLRG1Q96E93 195 aa17.47■□□□□ 0.39
SMARCA4-215ENST00000590574 TXLNGYQ9BZA5 131 aa17.47■□□□□ 0.39
SMARCA4-215ENST00000590574 IL22Q9GZX6 179 aa17.47■□□□□ 0.39
SMARCA4-215ENST00000590574 PDGFCQ9NRA1 345 aa17.47■□□□□ 0.39
SMARCA4-215ENST00000590574 IRAK4Q9NWZ3 460 aa17.47■□□□□ 0.39
SMARCA4-215ENST00000590574 RNF112Q9ULX5 631 aa17.47■□□□□ 0.39
SMARCA4-215ENST00000590574 CACNA1SQ13698 1873 aa17.46■□□□□ 0.39
SMARCA4-215ENST00000590574 OGDHQ02218 1023 aa17.46■□□□□ 0.39
SMARCA4-215ENST00000590574 USP4Q13107 963 aa17.46■□□□□ 0.39
SMARCA4-215ENST00000590574 ZFP1Q6P2D0 407 aa17.46■□□□□ 0.39
SMARCA4-215ENST00000590574 P2RY11Q96G91 374 aa17.46■□□□□ 0.39
SMARCA4-215ENST00000590574 MPP4Q96JB8 637 aa17.46■□□□□ 0.39
SMARCA4-215ENST00000590574 CSPG4P5Q96PW8 444 aa17.46■□□□□ 0.39
SMARCA4-215ENST00000590574 PRDM16Q9HAZ2 1276 aa17.46■□□□□ 0.39
SMARCA4-215ENST00000590574 FAM95CA0A1B0GW59 222 aa17.46■□□□□ 0.39
SMARCA4-215ENST00000590574 DDNO94850 711 aaPredicted RBP17.46■□□□□ 0.39
SMARCA4-215ENST00000590574 TPBGLP0DKB5 382 aa17.46■□□□□ 0.39
SMARCA4-215ENST00000590574 PTPN1P18031 435 aaKnown RBP17.46■□□□□ 0.39
SMARCA4-215ENST00000590574 AASDHQ4L235 1098 aaPredicted RBP17.46■□□□□ 0.39
SMARCA4-215ENST00000590574 GNASQ5JWF2 1037 aa17.46■□□□□ 0.39
SMARCA4-215ENST00000590574 ZBTB49Q6ZSB9 765 aa17.46■□□□□ 0.39
SMARCA4-215ENST00000590574 MTMR14Q8NCE2 650 aa17.46■□□□□ 0.39
SMARCA4-215ENST00000590574 TMEM79Q9BSE2 394 aa17.46■□□□□ 0.39
SMARCA4-215ENST00000590574 WDR41Q9HAD4 459 aa17.46■□□□□ 0.39
SMARCA4-215ENST00000590574 FETUBQ9UGM5 382 aa17.46■□□□□ 0.39
SMARCA4-215ENST00000590574 ZNF180Q9UJW8 692 aa17.46■□□□□ 0.39
SMARCA4-215ENST00000590574 ADAMTS7Q9UKP4 1686 aa17.46■□□□□ 0.39
SMARCA4-215ENST00000590574 IRS2Q9Y4H2 1338 aa17.46■□□□□ 0.39
SMARCA4-215ENST00000590574 GPR25O00155 361 aa17.46■□□□□ 0.39
SMARCA4-215ENST00000590574 NFKB1P19838 968 aa17.46■□□□□ 0.39
SMARCA4-215ENST00000590574 GRIA4P48058 902 aa17.46■□□□□ 0.39
SMARCA4-215ENST00000590574 GPX6P59796 221 aa17.46■□□□□ 0.39
SMARCA4-215ENST00000590574 GAD2Q05329 585 aa17.46■□□□□ 0.39
SMARCA4-215ENST00000590574 BLMHQ13867 455 aa17.46■□□□□ 0.39
SMARCA4-215ENST00000590574 UBAP2Q5T6F2 1119 aaKnown RBP17.46■□□□□ 0.39
SMARCA4-215ENST00000590574 ZNF333Q96JL9 665 aa17.46■□□□□ 0.39
SMARCA4-215ENST00000590574 SEMA6AQ9H2E6 1030 aa17.46■□□□□ 0.39
SMARCA4-215ENST00000590574 CAB39LQ9H9S4 337 aa17.46■□□□□ 0.39
SMARCA4-215ENST00000590574 NPR3P17342 541 aa17.46■□□□□ 0.38
SMARCA4-215ENST00000590574 TPSB2P20231 275 aa17.46■□□□□ 0.38
SMARCA4-215ENST00000590574 PLK1P53350 603 aa17.46■□□□□ 0.38
SMARCA4-215ENST00000590574 TPSAB1Q15661 275 aa17.46■□□□□ 0.38
SMARCA4-215ENST00000590574 PMF1Q6P1K2 205 aa17.46■□□□□ 0.38
SMARCA4-215ENST00000590574 DCAKDQ8WVC6 231 aa17.46■□□□□ 0.38
SMARCA4-215ENST00000590574 KCTD15Q96SI1 283 aaPredicted RBP17.46■□□□□ 0.38
SMARCA4-215ENST00000590574 TBC1D13Q9NVG8 400 aa17.46■□□□□ 0.38
SMARCA4-215ENST00000590574 LTFP02788 710 aa17.45■□□□□ 0.38
SMARCA4-215ENST00000590574 MYL4P12829 197 aa17.45■□□□□ 0.38
SMARCA4-215ENST00000590574 CHRM3P20309 590 aa17.45■□□□□ 0.38
SMARCA4-215ENST00000590574 MPP2Q14168 576 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms