RNA–Protein interactions for RNA: ENST00000590541.1

RETREG3-210, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 409 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-210ENST00000590541 WBP1Q96G27 269 aa17.99■□□□□ 0.47
RETREG3-210ENST00000590541 SERAC1Q96JX3 654 aa17.99■□□□□ 0.47
RETREG3-210ENST00000590541 LGMNQ99538 433 aa17.99■□□□□ 0.47
RETREG3-210ENST00000590541 SEMA4CQ9C0C4 833 aa17.99■□□□□ 0.47
RETREG3-210ENST00000590541 TMEM8AQ9HCN3 771 aa17.99■□□□□ 0.47
RETREG3-210ENST00000590541 INTS6Q9UL03 887 aaKnown RBP17.99■□□□□ 0.47
RETREG3-210ENST00000590541 FZD4Q9ULV1 537 aa17.99■□□□□ 0.47
RETREG3-210ENST00000590541 GOLGA6L7A0A1B0GV03 622 aa17.98■□□□□ 0.47
RETREG3-210ENST00000590541 TBL1XO60907 577 aa17.98■□□□□ 0.47
RETREG3-210ENST00000590541 RNASEH1O60930 286 aaKnown RBP17.98■□□□□ 0.47
RETREG3-210ENST00000590541 TRIM49P0CI25 452 aa17.98■□□□□ 0.47
RETREG3-210ENST00000590541 TRIM49CP0CI26 452 aa17.98■□□□□ 0.47
RETREG3-210ENST00000590541 SLC6A4P31645 630 aa17.98■□□□□ 0.47
RETREG3-210ENST00000590541 PRCPP42785 496 aa17.98■□□□□ 0.47
RETREG3-210ENST00000590541 RAD23BP54727 409 aa17.98■□□□□ 0.47
RETREG3-210ENST00000590541 SFSWAPQ12872 951 aaKnown RBP17.98■□□□□ 0.47
RETREG3-210ENST00000590541 STIM1Q13586 685 aa17.98■□□□□ 0.47
RETREG3-210ENST00000590541 PROX2Q3B8N5 592 aa17.98■□□□□ 0.47
RETREG3-210ENST00000590541 C9orf64Q5T6V5 341 aa17.98■□□□□ 0.47
RETREG3-210ENST00000590541 KRT39Q6A163 491 aa17.98■□□□□ 0.47
RETREG3-210ENST00000590541 TTC39CQ8N584 583 aa17.98■□□□□ 0.47
RETREG3-210ENST00000590541 AADATQ8N5Z0 425 aa17.98■□□□□ 0.47
RETREG3-210ENST00000590541 ZNF248Q8NDW4 579 aa17.98■□□□□ 0.47
RETREG3-210ENST00000590541 NAF1Q96HR8 494 aaKnown RBP17.98■□□□□ 0.47
RETREG3-210ENST00000590541 OMDQ99983 421 aa17.98■□□□□ 0.47
RETREG3-210ENST00000590541 ARID1BQ8NFD5 2236 aaPredicted RBP17.97■□□□□ 0.47
RETREG3-210ENST00000590541 SLC16A3O15427 465 aaKnown RBP17.97■□□□□ 0.47
RETREG3-210ENST00000590541 SLC8A1P32418 973 aa17.97■□□□□ 0.47
RETREG3-210ENST00000590541 CSKP41240 450 aa17.97■□□□□ 0.47
RETREG3-210ENST00000590541 ADPRHP54922 357 aa17.97■□□□□ 0.47
RETREG3-210ENST00000590541 ST8SIA6P61647 398 aa17.97■□□□□ 0.47
RETREG3-210ENST00000590541 FKBP3Q00688 224 aaKnown RBP17.97■□□□□ 0.47
RETREG3-210ENST00000590541 RHDQ02161 417 aa17.97■□□□□ 0.47
RETREG3-210ENST00000590541 LRRC63Q05C16 580 aa17.97■□□□□ 0.47
RETREG3-210ENST00000590541 ARID5BQ14865 1188 aa17.97■□□□□ 0.47
RETREG3-210ENST00000590541 PKDCCQ504Y2 493 aa17.97■□□□□ 0.47
RETREG3-210ENST00000590541 FAM133BQ5BKY9 247 aaKnown RBP17.97■□□□□ 0.47
RETREG3-210ENST00000590541 BSPRYQ5W0U4 402 aa17.97■□□□□ 0.47
RETREG3-210ENST00000590541 KDM7AQ6ZMT4 941 aa17.97■□□□□ 0.47
RETREG3-210ENST00000590541 MFN1Q8IWA4 741 aa17.97■□□□□ 0.47
RETREG3-210ENST00000590541 OXR1Q8N573 874 aa17.97■□□□□ 0.47
RETREG3-210ENST00000590541 RNF139Q8WU17 664 aa17.97■□□□□ 0.47
RETREG3-210ENST00000590541 HIC2Q96JB3 615 aa17.97■□□□□ 0.47
RETREG3-210ENST00000590541 FAM129BQ96TA1 746 aa17.97■□□□□ 0.47
RETREG3-210ENST00000590541 CPNE5Q9HCH3 593 aa17.97■□□□□ 0.47
RETREG3-210ENST00000590541 CISHQ9NSE2 258 aa17.97■□□□□ 0.47
RETREG3-210ENST00000590541 PCDHB1Q9Y5F3 818 aa17.97■□□□□ 0.47
RETREG3-210ENST00000590541 YJEFN3A6XGL0 299 aa17.96■□□□□ 0.47
RETREG3-210ENST00000590541 TTC34A8MYJ7 566 aa17.96■□□□□ 0.47
RETREG3-210ENST00000590541 E7ENQ6 273 aa17.96■□□□□ 0.47
RETREG3-210ENST00000590541 LATO43561 262 aa17.96■□□□□ 0.47
RETREG3-210ENST00000590541 MT-CO3P00414 261 aa17.96■□□□□ 0.47
RETREG3-210ENST00000590541 ASLP04424 464 aa17.96■□□□□ 0.47
RETREG3-210ENST00000590541 PPP2CBP62714 309 aa17.96■□□□□ 0.47
RETREG3-210ENST00000590541 PPP2CAP67775 309 aa17.96■□□□□ 0.47
RETREG3-210ENST00000590541 SLC45A4Q5BKX6 768 aa17.96■□□□□ 0.47
RETREG3-210ENST00000590541 SND1Q7KZF4 910 aaKnown RBP eCLIP17.96■□□□□ 0.47
RETREG3-210ENST00000590541 SMYD4Q8IYR2 804 aaPredicted RBP17.96■□□□□ 0.47
RETREG3-210ENST00000590541 KDM1BQ8NB78 822 aa17.96■□□□□ 0.47
RETREG3-210ENST00000590541 OR14C36Q8NHC7 312 aa17.96■□□□□ 0.47
RETREG3-210ENST00000590541 FIBINQ8TAL6 211 aa17.96■□□□□ 0.47
RETREG3-210ENST00000590541 TATDN2Q93075 761 aa17.96■□□□□ 0.47
RETREG3-210ENST00000590541 PRICKLE1Q96MT3 831 aaPredicted RBP17.96■□□□□ 0.47
RETREG3-210ENST00000590541 IRX2Q9BZI1 471 aaPredicted RBP17.96■□□□□ 0.47
RETREG3-210ENST00000590541 MMRN2Q9H8L6 949 aa17.96■□□□□ 0.47
RETREG3-210ENST00000590541 ABCC13Q9NSE7 274 aa17.96■□□□□ 0.47
RETREG3-210ENST00000590541 STIM2Q9P246 746 aa17.96■□□□□ 0.47
RETREG3-210ENST00000590541 MYO18BQ8IUG5 2567 aa17.95■□□□□ 0.46
RETREG3-210ENST00000590541 TARSL2A2RTX5 802 aaKnown RBP17.95■□□□□ 0.46
RETREG3-210ENST00000590541 PYCARD-AS1I3L0S3 204 aa17.95■□□□□ 0.46
RETREG3-210ENST00000590541 TRIM38O00635 465 aa17.95■□□□□ 0.46
RETREG3-210ENST00000590541 PSMA7O14818 248 aa17.95■□□□□ 0.46
RETREG3-210ENST00000590541 XPO1O14980 1071 aaKnown RBP17.95■□□□□ 0.46
RETREG3-210ENST00000590541 IGLV3-27P01718 113 aa17.95■□□□□ 0.46
RETREG3-210ENST00000590541 GOT1P17174 413 aa17.95■□□□□ 0.46
RETREG3-210ENST00000590541 CTSOP43234 321 aaPredicted RBP17.95■□□□□ 0.46
RETREG3-210ENST00000590541 PSMD8P48556 350 aa17.95■□□□□ 0.46
RETREG3-210ENST00000590541 SLC8A3P57103 927 aa17.95■□□□□ 0.46
RETREG3-210ENST00000590541 PCBP4P57723 403 aaKnown RBP17.95■□□□□ 0.46
RETREG3-210ENST00000590541 TMPRSS3P57727 454 aa17.95■□□□□ 0.46
RETREG3-210ENST00000590541 ADIGQ0VDE8 80 aa17.95■□□□□ 0.46
RETREG3-210ENST00000590541 ARHGAP40Q5TG30 622 aa17.95■□□□□ 0.46
RETREG3-210ENST00000590541 NAPEPLDQ6IQ20 393 aa17.95■□□□□ 0.46
RETREG3-210ENST00000590541 ZNF557Q8N988 423 aaPredicted RBP17.95■□□□□ 0.46
RETREG3-210ENST00000590541 MFSD2AQ8NA29 543 aa17.95■□□□□ 0.46
RETREG3-210ENST00000590541 FBXL13Q8NEE6 735 aa17.95■□□□□ 0.46
RETREG3-210ENST00000590541 SEMA4DQ92854 862 aa17.95■□□□□ 0.46
RETREG3-210ENST00000590541 MYEOVQ96EZ4 313 aa17.95■□□□□ 0.46
RETREG3-210ENST00000590541 DHTKD1Q96HY7 919 aaPredicted RBP17.95■□□□□ 0.46
RETREG3-210ENST00000590541 ZNF578Q96N58 590 aaPredicted RBP17.95■□□□□ 0.46
RETREG3-210ENST00000590541 LRRC4Q9HBW1 653 aa17.95■□□□□ 0.46
RETREG3-210ENST00000590541 ARHGAP20Q9P2F6 1191 aa17.95■□□□□ 0.46
RETREG3-210ENST00000590541 TPX2Q9ULW0 747 aaKnown RBP17.95■□□□□ 0.46
RETREG3-210ENST00000590541 ERVW-1Q9UQF0 538 aa17.95■□□□□ 0.46
RETREG3-210ENST00000590541 B8ZZF3 427 aa17.94■□□□□ 0.46
RETREG3-210ENST00000590541 IRAK2O43187 625 aa17.94■□□□□ 0.46
RETREG3-210ENST00000590541 SIGLEC6O43699 453 aa17.94■□□□□ 0.46
RETREG3-210ENST00000590541 ACSL4O60488 711 aa17.94■□□□□ 0.46
RETREG3-210ENST00000590541 SDC3O75056 442 aa17.94■□□□□ 0.46
RETREG3-210ENST00000590541 MXI1P50539 228 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms