RNA–Protein interactions for RNA: ENST00000590499.1

SMAD4-211, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-211ENST00000590499 MS4A13Q5J8X5 152 aa11.61□□□□□ -0.55
SMAD4-211ENST00000590499 NAA35Q5VZE5 725 aa11.61□□□□□ -0.55
SMAD4-211ENST00000590499 TRNP1Q6NT89 227 aa11.61□□□□□ -0.55
SMAD4-211ENST00000590499 KIAA1211LQ6NV74 962 aa11.61□□□□□ -0.55
SMAD4-211ENST00000590499 PRR23BQ6ZRT6 265 aa11.61□□□□□ -0.55
SMAD4-211ENST00000590499 ERICH1Q86X53 443 aa11.61□□□□□ -0.55
SMAD4-211ENST00000590499 HJURPQ8NCD3 748 aaPredicted RBP11.61□□□□□ -0.55
SMAD4-211ENST00000590499 CPA5Q8WXQ8 436 aa11.61□□□□□ -0.55
SMAD4-211ENST00000590499 NT5C3BQ969T7 300 aa11.61□□□□□ -0.55
SMAD4-211ENST00000590499 ZC3H10Q96K80 434 aaKnown RBP11.61□□□□□ -0.55
SMAD4-211ENST00000590499 BTN2A3PQ96KV6 586 aa11.61□□□□□ -0.55
SMAD4-211ENST00000590499 PCDHB18PQ96TA0 734 aa11.61□□□□□ -0.55
SMAD4-211ENST00000590499 NPY6RQ99463 290 aa11.61□□□□□ -0.55
SMAD4-211ENST00000590499 PRMT1Q99873 361 aaKnown RBP11.61□□□□□ -0.55
SMAD4-211ENST00000590499 SPOCK3Q9BQ16 436 aa11.61□□□□□ -0.55
SMAD4-211ENST00000590499 KRTAP4-8Q9BYQ9 185 aa11.61□□□□□ -0.55
SMAD4-211ENST00000590499 TPSD1Q9BZJ3 242 aa11.61□□□□□ -0.55
SMAD4-211ENST00000590499 PDCL3Q9H2J4 239 aa11.61□□□□□ -0.55
SMAD4-211ENST00000590499 SYNCQ9H7C4 482 aa11.61□□□□□ -0.55
SMAD4-211ENST00000590499 FAM204AQ9H8W3 233 aa11.61□□□□□ -0.55
SMAD4-211ENST00000590499 CBX8Q9HC52 389 aa11.61□□□□□ -0.55
SMAD4-211ENST00000590499 DDIT4Q9NX09 232 aa11.61□□□□□ -0.55
SMAD4-211ENST00000590499 THAP10Q9P2Z0 257 aaPredicted RBP11.61□□□□□ -0.55
SMAD4-211ENST00000590499 TNRC6BQ9UPQ9 1833 aaKnown RBP11.6□□□□□ -0.55
SMAD4-211ENST00000590499 TCRBV21S2A2A0A5A6 115 aa11.6□□□□□ -0.55
SMAD4-211ENST00000590499 NPC1O15118 1278 aa11.6□□□□□ -0.55
SMAD4-211ENST00000590499 TBL1XO60907 577 aa11.6□□□□□ -0.55
SMAD4-211ENST00000590499 MOCS2O96007 188 aaPredicted RBP11.6□□□□□ -0.55
SMAD4-211ENST00000590499 APOEP02649 317 aa11.6□□□□□ -0.55
SMAD4-211ENST00000590499 RETP07949 1114 aa11.6□□□□□ -0.55
SMAD4-211ENST00000590499 UNGP13051 313 aaPredicted RBP11.6□□□□□ -0.55
SMAD4-211ENST00000590499 TFE3P19532 575 aaPredicted RBP11.6□□□□□ -0.55
SMAD4-211ENST00000590499 MMP8P22894 467 aa11.6□□□□□ -0.55
SMAD4-211ENST00000590499 NOS2P35228 1153 aa11.6□□□□□ -0.55
SMAD4-211ENST00000590499 FLT3P36888 993 aa11.6□□□□□ -0.55
SMAD4-211ENST00000590499 WASP42768 502 aa11.6□□□□□ -0.55
SMAD4-211ENST00000590499 RPS24P62847 133 aaKnown RBP11.6□□□□□ -0.55
SMAD4-211ENST00000590499 SRSF11Q05519 484 aaKnown RBP11.6□□□□□ -0.55
SMAD4-211ENST00000590499 PTP4A2Q12974 167 aa11.6□□□□□ -0.55
SMAD4-211ENST00000590499 ZSCAN23Q3MJ62 389 aa11.6□□□□□ -0.55
SMAD4-211ENST00000590499 PLK5Q496M5 336 aa11.6□□□□□ -0.55
SMAD4-211ENST00000590499 C2CD6Q53TS8 623 aa11.6□□□□□ -0.55
SMAD4-211ENST00000590499 TRIM72Q6ZMU5 477 aa11.6□□□□□ -0.55
SMAD4-211ENST00000590499 CEP68Q76N32 757 aa11.6□□□□□ -0.55
SMAD4-211ENST00000590499 ARCQ7LC44 396 aa11.6□□□□□ -0.55
SMAD4-211ENST00000590499 CACNA2D4Q7Z3S7 1137 aa11.6□□□□□ -0.55
SMAD4-211ENST00000590499 BNIPLQ7Z465 357 aa11.6□□□□□ -0.55
SMAD4-211ENST00000590499 ADIPOR2Q86V24 386 aa11.6□□□□□ -0.55
SMAD4-211ENST00000590499 KBTBD6Q86V97 674 aa11.6□□□□□ -0.55
SMAD4-211ENST00000590499 CHPFQ8IZ52 775 aa11.6□□□□□ -0.55
SMAD4-211ENST00000590499 WFIKKN2Q8TEU8 576 aa11.6□□□□□ -0.55
SMAD4-211ENST00000590499 PGAP3Q96FM1 320 aaPredicted RBP11.6□□□□□ -0.55
SMAD4-211ENST00000590499 NAP1L5Q96NT1 182 aaPredicted RBP11.6□□□□□ -0.55
SMAD4-211ENST00000590499 DDX50Q9BQ39 737 aaKnown RBP11.6□□□□□ -0.55
SMAD4-211ENST00000590499 SYT11Q9BT88 431 aa11.6□□□□□ -0.55
SMAD4-211ENST00000590499 PARD6AQ9NPB6 346 aa11.6□□□□□ -0.55
SMAD4-211ENST00000590499 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.6□□□□□ -0.55
SMAD4-211ENST00000590499 ELOVL2Q9NXB9 296 aa11.6□□□□□ -0.55
SMAD4-211ENST00000590499 CACNA2D2Q9NY47 1150 aa11.6□□□□□ -0.55
SMAD4-211ENST00000590499 RRN3Q9NYV6 651 aa11.6□□□□□ -0.55
SMAD4-211ENST00000590499 NCDNQ9UBB6 729 aa11.6□□□□□ -0.55
SMAD4-211ENST00000590499 TMEM59LQ9UK28 342 aa11.6□□□□□ -0.55
SMAD4-211ENST00000590499 GMEB2Q9UKD1 530 aa11.6□□□□□ -0.55
SMAD4-211ENST00000590499 RAB23Q9ULC3 237 aa11.6□□□□□ -0.55
SMAD4-211ENST00000590499 CACNA1AO00555 2505 aa11.6□□□□□ -0.55
SMAD4-211ENST00000590499 CEP192Q8TEP8 1941 aa11.6□□□□□ -0.55
SMAD4-211ENST00000590499 DOCK4Q8N1I0 1966 aa11.59□□□□□ -0.55
SMAD4-211ENST00000590499 A0A1W2PQC6 194 aa11.59□□□□□ -0.55
SMAD4-211ENST00000590499 FAM170AA1A519 330 aa11.59□□□□□ -0.55
SMAD4-211ENST00000590499 WASH3PC4AMC7 463 aa11.59□□□□□ -0.55
SMAD4-211ENST00000590499 I6L893 689 aaPredicted RBP11.59□□□□□ -0.55
SMAD4-211ENST00000590499 DCLK1O15075 740 aa11.59□□□□□ -0.55
SMAD4-211ENST00000590499 TIMM44O43615 452 aa11.59□□□□□ -0.55
SMAD4-211ENST00000590499 ALDH1A2O94788 518 aa11.59□□□□□ -0.55
SMAD4-211ENST00000590499 CELA2BP08218 269 aaPredicted RBP11.59□□□□□ -0.55
SMAD4-211ENST00000590499 SLC2A3P11169 496 aa11.59□□□□□ -0.55
SMAD4-211ENST00000590499 PABPC1P11940 636 aaKnown RBP11.59□□□□□ -0.55
SMAD4-211ENST00000590499 GABRG2P18507 467 aa11.59□□□□□ -0.55
SMAD4-211ENST00000590499 TACR2P21452 398 aa11.59□□□□□ -0.55
SMAD4-211ENST00000590499 CCR1P32246 355 aa11.59□□□□□ -0.55
SMAD4-211ENST00000590499 CD70P32970 193 aa11.59□□□□□ -0.55
SMAD4-211ENST00000590499 P2RY2P41231 377 aa11.59□□□□□ -0.55
SMAD4-211ENST00000590499 IL12RB1P42701 662 aa11.59□□□□□ -0.55
SMAD4-211ENST00000590499 CXCR3P49682 368 aa11.59□□□□□ -0.55
SMAD4-211ENST00000590499 GSCP56915 257 aaPredicted RBP11.59□□□□□ -0.55
SMAD4-211ENST00000590499 CENPCQ03188 943 aa11.59□□□□□ -0.55
SMAD4-211ENST00000590499 ZNF234Q14588 700 aa11.59□□□□□ -0.55
SMAD4-211ENST00000590499 MAP7D1Q3KQU3 841 aa11.59□□□□□ -0.55
SMAD4-211ENST00000590499 FAM102AQ5T9C2 384 aaPredicted RBP11.59□□□□□ -0.55
SMAD4-211ENST00000590499 RAP1GAP2Q684P5 730 aa11.59□□□□□ -0.55
SMAD4-211ENST00000590499 MMS22LQ6ZRQ5 1243 aa11.59□□□□□ -0.55
SMAD4-211ENST00000590499 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.59□□□□□ -0.55
SMAD4-211ENST00000590499 LUZP1Q86V48 1076 aa11.59□□□□□ -0.55
SMAD4-211ENST00000590499 AHI1Q8N157 1196 aa11.59□□□□□ -0.55
SMAD4-211ENST00000590499 ATP6V0D2Q8N8Y2 350 aa11.59□□□□□ -0.55
SMAD4-211ENST00000590499 MSANTD4Q8NCY6 345 aa11.59□□□□□ -0.55
SMAD4-211ENST00000590499 FIBINQ8TAL6 211 aa11.59□□□□□ -0.55
SMAD4-211ENST00000590499 HMGB4Q8WW32 186 aa11.59□□□□□ -0.55
SMAD4-211ENST00000590499 SORCS1Q8WY21 1168 aa11.59□□□□□ -0.55
SMAD4-211ENST00000590499 LOXL4Q96JB6 756 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms