RNA–Protein interactions for RNA: ENST00000590315.5

DDX39A-213, Transcript of DExD-box helicase 39A, humanhuman

TSL 5

Gene DDX39A, Length 566 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-213ENST00000590315 TERB1Q8NA31 727 aa13.24□□□□□ -0.29
DDX39A-213ENST00000590315 WFDC5Q8TCV5 224 aa13.24□□□□□ -0.29
DDX39A-213ENST00000590315 PBXIP1Q96AQ6 731 aa13.24□□□□□ -0.29
DDX39A-213ENST00000590315 TRIM44Q96DX7 344 aaPredicted RBP13.24□□□□□ -0.29
DDX39A-213ENST00000590315 P2RY11Q96G91 374 aa13.24□□□□□ -0.29
DDX39A-213ENST00000590315 SLC2A11Q9BYW1 496 aa13.24□□□□□ -0.29
DDX39A-213ENST00000590315 EPHX3Q9H6B9 360 aa13.24□□□□□ -0.29
DDX39A-213ENST00000590315 KIAA1522Q9P206 1035 aaPredicted RBP13.24□□□□□ -0.29
DDX39A-213ENST00000590315 DNAI1Q9UI46 699 aa13.24□□□□□ -0.29
DDX39A-213ENST00000590315 GGA2Q9UJY4 613 aa13.24□□□□□ -0.29
DDX39A-213ENST00000590315 AMFRQ9UKV5 643 aa13.24□□□□□ -0.29
DDX39A-213ENST00000590315 CLEC4EQ9ULY5 219 aa13.24□□□□□ -0.29
DDX39A-213ENST00000590315 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.24□□□□□ -0.29
DDX39A-213ENST00000590315 CAPN6Q9Y6Q1 641 aa13.24□□□□□ -0.29
DDX39A-213ENST00000590315 ANKRD36A6QL64 1941 aa13.23□□□□□ -0.29
DDX39A-213ENST00000590315 MUC22E2RYF6 1773 aaPredicted RBP13.23□□□□□ -0.29
DDX39A-213ENST00000590315 FGF10O15520 208 aaPredicted RBP13.23□□□□□ -0.29
DDX39A-213ENST00000590315 PSTPIP1O43586 416 aa13.23□□□□□ -0.29
DDX39A-213ENST00000590315 PABPC1P11940 636 aaKnown RBP13.23□□□□□ -0.29
DDX39A-213ENST00000590315 RHOQP17081 205 aa13.23□□□□□ -0.29
DDX39A-213ENST00000590315 DRD1P21728 446 aa13.23□□□□□ -0.29
DDX39A-213ENST00000590315 CD70P32970 193 aa13.23□□□□□ -0.29
DDX39A-213ENST00000590315 CSKP41240 450 aa13.23□□□□□ -0.29
DDX39A-213ENST00000590315 GRIA2P42262 883 aa13.23□□□□□ -0.29
DDX39A-213ENST00000590315 NRG1Q02297 640 aaPredicted RBP13.23□□□□□ -0.29
DDX39A-213ENST00000590315 LMAN2Q12907 356 aa13.23□□□□□ -0.29
DDX39A-213ENST00000590315 TMEM196Q5HYL7 178 aa13.23□□□□□ -0.29
DDX39A-213ENST00000590315 MPP7Q5T2T1 576 aa13.23□□□□□ -0.29
DDX39A-213ENST00000590315 C6orf118Q5T5N4 469 aa13.23□□□□□ -0.29
DDX39A-213ENST00000590315 RNF219Q5W0B1 726 aaPredicted RBP13.23□□□□□ -0.29
DDX39A-213ENST00000590315 ASTLQ6HA08 431 aaPredicted RBP13.23□□□□□ -0.29
DDX39A-213ENST00000590315 FSTL4Q6MZW2 842 aa13.23□□□□□ -0.29
DDX39A-213ENST00000590315 CYP4V2Q6ZWL3 525 aaPredicted RBP13.23□□□□□ -0.29
DDX39A-213ENST00000590315 MAP7D3Q8IWC1 876 aa13.23□□□□□ -0.29
DDX39A-213ENST00000590315 SUGP1Q8IWZ8 645 aaKnown RBP13.23□□□□□ -0.29
DDX39A-213ENST00000590315 AHI1Q8N157 1196 aa13.23□□□□□ -0.29
DDX39A-213ENST00000590315 RNF10Q8N5U6 811 aaKnown RBP13.23□□□□□ -0.29
DDX39A-213ENST00000590315 PJA1Q8NG27 643 aa13.23□□□□□ -0.29
DDX39A-213ENST00000590315 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.23□□□□□ -0.29
DDX39A-213ENST00000590315 WFIKKN2Q8TEU8 576 aa13.23□□□□□ -0.29
DDX39A-213ENST00000590315 UCMAQ8WVF2 138 aa13.23□□□□□ -0.29
DDX39A-213ENST00000590315 LMAN1LQ9HAT1 526 aa13.23□□□□□ -0.29
DDX39A-213ENST00000590315 PCDH18Q9HCL0 1135 aa13.23□□□□□ -0.29
DDX39A-213ENST00000590315 FBRSL1Q9HCM7 1045 aaKnown RBP13.23□□□□□ -0.29
DDX39A-213ENST00000590315 RBM12Q9NTZ6 932 aaKnown RBP13.23□□□□□ -0.29
DDX39A-213ENST00000590315 DDX56Q9NY93 547 aaKnown RBP13.23□□□□□ -0.29
DDX39A-213ENST00000590315 PPARGC1AQ9UBK2 798 aaKnown RBP13.23□□□□□ -0.29
DDX39A-213ENST00000590315 PYCARDQ9ULZ3 195 aa13.23□□□□□ -0.29
DDX39A-213ENST00000590315 MTF2Q9Y483 593 aaPredicted RBP13.23□□□□□ -0.29
DDX39A-213ENST00000590315 IGLV3-10A0A075B6K4 115 aa13.22□□□□□ -0.29
DDX39A-213ENST00000590315 DRGXA6NNA5 263 aa13.22□□□□□ -0.29
DDX39A-213ENST00000590315 GFRA2O00451 464 aa13.22□□□□□ -0.29
DDX39A-213ENST00000590315 DCNP07585 359 aaKnown RBP13.22□□□□□ -0.29
DDX39A-213ENST00000590315 POLR2EP19388 210 aaKnown RBP13.22□□□□□ -0.29
DDX39A-213ENST00000590315 HLA-FP30511 346 aa13.22□□□□□ -0.29
DDX39A-213ENST00000590315 HTR7P34969 479 aa13.22□□□□□ -0.29
DDX39A-213ENST00000590315 TIE1P35590 1138 aa13.22□□□□□ -0.29
DDX39A-213ENST00000590315 OXCT1P55809 520 aa13.22□□□□□ -0.29
DDX39A-213ENST00000590315 MMRN1Q13201 1228 aa13.22□□□□□ -0.29
DDX39A-213ENST00000590315 DPYSL2Q16555 572 aa13.22□□□□□ -0.29
DDX39A-213ENST00000590315 GEN1Q17RS7 908 aa13.22□□□□□ -0.29
DDX39A-213ENST00000590315 C2orf27AQ580R0 203 aa13.22□□□□□ -0.29
DDX39A-213ENST00000590315 FSCBQ5H9T9 825 aa13.22□□□□□ -0.29
DDX39A-213ENST00000590315 DGKKQ5KSL6 1271 aa13.22□□□□□ -0.29
DDX39A-213ENST00000590315 MANEALQ5VSG8 457 aa13.22□□□□□ -0.29
DDX39A-213ENST00000590315 RFX8Q6ZV50 586 aa13.22□□□□□ -0.29
DDX39A-213ENST00000590315 POLNQ7Z5Q5 900 aa13.22□□□□□ -0.29
DDX39A-213ENST00000590315 RFX6Q8HWS3 928 aa13.22□□□□□ -0.29
DDX39A-213ENST00000590315 SFTPA1Q8IWL2 248 aa13.22□□□□□ -0.29
DDX39A-213ENST00000590315 ZNF683Q8IZ20 524 aa13.22□□□□□ -0.29
DDX39A-213ENST00000590315 FIBINQ8TAL6 211 aa13.22□□□□□ -0.29
DDX39A-213ENST00000590315 RNF25Q96BH1 459 aaPredicted RBP13.22□□□□□ -0.29
DDX39A-213ENST00000590315 NELL2Q99435 816 aa13.22□□□□□ -0.29
DDX39A-213ENST00000590315 SPON2Q9BUD6 331 aa13.22□□□□□ -0.29
DDX39A-213ENST00000590315 ZDHHC4Q9NPG8 344 aa13.22□□□□□ -0.29
DDX39A-213ENST00000590315 CWC15Q9P013 229 aaKnown RBP13.22□□□□□ -0.29
DDX39A-213ENST00000590315 VPS28Q9UK41 221 aa13.22□□□□□ -0.29
DDX39A-213ENST00000590315 PACSIN2Q9UNF0 486 aaPredicted RBP13.22□□□□□ -0.29
DDX39A-213ENST00000590315 SIT1Q9Y3P8 196 aa13.22□□□□□ -0.29
DDX39A-213ENST00000590315 F5P12259 2224 aa13.21□□□□□ -0.29
DDX39A-213ENST00000590315 RNF40O75150 1001 aa13.21□□□□□ -0.29
DDX39A-213ENST00000590315 CD48P09326 243 aa13.21□□□□□ -0.29
DDX39A-213ENST00000590315 CISD3P0C7P0 127 aa13.21□□□□□ -0.29
DDX39A-213ENST00000590315 AMPD1P23109 780 aa13.21□□□□□ -0.29
DDX39A-213ENST00000590315 MZF1P28698 734 aaPredicted RBP13.21□□□□□ -0.29
DDX39A-213ENST00000590315 MARCKSL1P49006 195 aa13.21□□□□□ -0.29
DDX39A-213ENST00000590315 MAPKAPK2P49137 400 aa13.21□□□□□ -0.29
DDX39A-213ENST00000590315 ZNF135P52742 658 aaPredicted RBP13.21□□□□□ -0.29
DDX39A-213ENST00000590315 MESP2Q0VG99 397 aa13.21□□□□□ -0.29
DDX39A-213ENST00000590315 SEMA3BQ13214 749 aa13.21□□□□□ -0.29
DDX39A-213ENST00000590315 DPYSL3Q14195 570 aa13.21□□□□□ -0.29
DDX39A-213ENST00000590315 PDK2Q15119 407 aa13.21□□□□□ -0.29
DDX39A-213ENST00000590315 FUT11Q495W5 492 aa13.21□□□□□ -0.29
DDX39A-213ENST00000590315 C5orf22Q49AR2 442 aa13.21□□□□□ -0.29
DDX39A-213ENST00000590315 FNDC3BQ53EP0 1204 aaKnown RBP13.21□□□□□ -0.29
DDX39A-213ENST00000590315 PITRM1Q5JRX3 1037 aa13.21□□□□□ -0.29
DDX39A-213ENST00000590315 MBLAC2Q68D91 279 aa13.21□□□□□ -0.29
DDX39A-213ENST00000590315 CWF19L1Q69YN2 538 aaKnown RBP13.21□□□□□ -0.29
DDX39A-213ENST00000590315 IL31Q6EBC2 164 aa13.21□□□□□ -0.29
DDX39A-213ENST00000590315 CCDC105Q8IYK2 499 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms