RNA–Protein interactions for RNA: ENST00000590208.5

MBD1-222, Transcript of methyl-CpG binding domain protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MBD1, Length 2,913 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-222ENST00000590208 NGRNQ9NPE2 291 aaKnown RBP16.14■□□□□ 0.17
MBD1-222ENST00000590208 PADI4Q9UM07 663 aa16.14■□□□□ 0.17
MBD1-222ENST00000590208 CLEC11AQ9Y240 323 aa16.14■□□□□ 0.17
MBD1-222ENST00000590208 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.14■□□□□ 0.17
MBD1-222ENST00000590208 ZNF189O75820 626 aaPredicted RBP16.14■□□□□ 0.17
MBD1-222ENST00000590208 RGS20O76081 388 aa16.14■□□□□ 0.17
MBD1-222ENST00000590208 H6PDO95479 791 aa16.14■□□□□ 0.17
MBD1-222ENST00000590208 LTFP02788 710 aa16.14■□□□□ 0.17
MBD1-222ENST00000590208 KRT19P08727 400 aa16.14■□□□□ 0.17
MBD1-222ENST00000590208 KCNA2P16389 499 aa16.14■□□□□ 0.17
MBD1-222ENST00000590208 GPD1P21695 349 aa16.14■□□□□ 0.17
MBD1-222ENST00000590208 ME2P23368 584 aa16.14■□□□□ 0.17
MBD1-222ENST00000590208 ACTR2P61160 394 aa16.14■□□□□ 0.17
MBD1-222ENST00000590208 CTBSQ01459 385 aa16.14■□□□□ 0.17
MBD1-222ENST00000590208 DLG2Q15700 870 aa16.14■□□□□ 0.17
MBD1-222ENST00000590208 MCRS1Q96EZ8 462 aa16.14■□□□□ 0.17
MBD1-222ENST00000590208 SLC29A1Q99808 456 aa16.14■□□□□ 0.17
MBD1-222ENST00000590208 HAUS8Q9BT25 410 aa16.14■□□□□ 0.17
MBD1-222ENST00000590208 PCDH18Q9HCL0 1135 aa16.14■□□□□ 0.17
MBD1-222ENST00000590208 SCAF8Q9UPN6 1271 aaKnown RBP16.14■□□□□ 0.17
MBD1-222ENST00000590208 HES2Q9Y543 173 aa16.14■□□□□ 0.17
MBD1-222ENST00000590208 M0QYV0 167 aa16.13■□□□□ 0.17
MBD1-222ENST00000590208 MICAL2O94851 1124 aa16.13■□□□□ 0.17
MBD1-222ENST00000590208 PIGRP01833 764 aa16.13■□□□□ 0.17
MBD1-222ENST00000590208 BAG6P46379 1132 aa16.13■□□□□ 0.17
MBD1-222ENST00000590208 ADRM1Q16186 407 aa16.13■□□□□ 0.17
MBD1-222ENST00000590208 DUOXA2Q1HG44 320 aa16.13■□□□□ 0.17
MBD1-222ENST00000590208 SLC9A4Q6AI14 798 aa16.13■□□□□ 0.17
MBD1-222ENST00000590208 TMEM126BQ8IUX1 230 aa16.13■□□□□ 0.17
MBD1-222ENST00000590208 TMEM79Q9BSE2 394 aa16.13■□□□□ 0.17
MBD1-222ENST00000590208 PORCNQ9H237 461 aa16.13■□□□□ 0.17
MBD1-222ENST00000590208 OLAHQ9NV23 265 aa16.13■□□□□ 0.17
MBD1-222ENST00000590208 LY75O60449 1722 aa16.13■□□□□ 0.17
MBD1-222ENST00000590208 NR3C2P08235 984 aa16.13■□□□□ 0.17
MBD1-222ENST00000590208 MX2P20592 715 aa16.13■□□□□ 0.17
MBD1-222ENST00000590208 MGAT1P26572 445 aa16.13■□□□□ 0.17
MBD1-222ENST00000590208 MLH1P40692 756 aa16.13■□□□□ 0.17
MBD1-222ENST00000590208 HSPA13P48723 471 aa16.13■□□□□ 0.17
MBD1-222ENST00000590208 IRF9Q00978 393 aa16.13■□□□□ 0.17
MBD1-222ENST00000590208 BAATQ14032 418 aaPredicted RBP16.13■□□□□ 0.17
MBD1-222ENST00000590208 CDR2LQ86X02 465 aaPredicted RBP16.13■□□□□ 0.17
MBD1-222ENST00000590208 LRTOMTQ8WZ04 291 aa16.13■□□□□ 0.17
MBD1-222ENST00000590208 GFM2Q969S9 779 aaKnown RBP16.13■□□□□ 0.17
MBD1-222ENST00000590208 NPAS2Q99743 824 aa16.13■□□□□ 0.17
MBD1-222ENST00000590208 CNPY3Q9BT09 278 aa16.13■□□□□ 0.17
MBD1-222ENST00000590208 NUF2Q9BZD4 464 aa16.13■□□□□ 0.17
MBD1-222ENST00000590208 OSBPL6Q9BZF3 934 aa16.13■□□□□ 0.17
MBD1-222ENST00000590208 TUT1Q9H6E5 874 aaKnown RBP16.13■□□□□ 0.17
MBD1-222ENST00000590208 PLGRKTQ9HBL7 147 aa16.13■□□□□ 0.17
MBD1-222ENST00000590208 TUBGCP4Q9UGJ1 667 aa16.13■□□□□ 0.17
MBD1-222ENST00000590208 C2CD4BA6NLJ0 364 aa16.12■□□□□ 0.17
MBD1-222ENST00000590208 ACOT8O14734 319 aa16.12■□□□□ 0.17
MBD1-222ENST00000590208 BCAS2O75934 225 aaPredicted RBP16.12■□□□□ 0.17
MBD1-222ENST00000590208 ALDH1A2O94788 518 aa16.12■□□□□ 0.17
MBD1-222ENST00000590208 COL6A2P12110 1019 aa16.12■□□□□ 0.17
MBD1-222ENST00000590208 PGGT1BP53609 377 aa16.12■□□□□ 0.17
MBD1-222ENST00000590208 OR6B2Q6IFH4 312 aa16.12■□□□□ 0.17
MBD1-222ENST00000590208 RDM1Q8NG50 284 aa16.12■□□□□ 0.17
MBD1-222ENST00000590208 CEP41Q9BYV8 373 aa16.12■□□□□ 0.17
MBD1-222ENST00000590208 TMEM39BQ9GZU3 492 aa16.12■□□□□ 0.17
MBD1-222ENST00000590208 PCDHAC1Q9H158 963 aa16.12■□□□□ 0.17
MBD1-222ENST00000590208 CAB39LQ9H9S4 337 aa16.12■□□□□ 0.17
MBD1-222ENST00000590208 JPH1Q9HDC5 661 aaPredicted RBP16.12■□□□□ 0.17
MBD1-222ENST00000590208 SNX15Q9NRS6 342 aa16.12■□□□□ 0.17
MBD1-222ENST00000590208 H3BNH8 94 aa16.12■□□□□ 0.17
MBD1-222ENST00000590208 CAPNS1P04632 268 aa16.12■□□□□ 0.17
MBD1-222ENST00000590208 JUNP05412 331 aaKnown RBP16.12■□□□□ 0.17
MBD1-222ENST00000590208 ABCD1P33897 745 aa16.12■□□□□ 0.17
MBD1-222ENST00000590208 NAMPTP43490 491 aa16.12■□□□□ 0.17
MBD1-222ENST00000590208 NUMBP49757 651 aa16.12■□□□□ 0.17
MBD1-222ENST00000590208 CLVS1Q8IUQ0 354 aaPredicted RBP16.12■□□□□ 0.17
MBD1-222ENST00000590208 CDKL2Q92772 493 aa16.12■□□□□ 0.17
MBD1-222ENST00000590208 YIPF2Q9BWQ6 316 aa16.12■□□□□ 0.17
MBD1-222ENST00000590208 DHX35Q9H5Z1 703 aaKnown RBP16.12■□□□□ 0.17
MBD1-222ENST00000590208 FZD1Q9UP38 647 aa16.12■□□□□ 0.17
MBD1-222ENST00000590208 RIPK3Q9Y572 518 aa16.12■□□□□ 0.17
MBD1-222ENST00000590208 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.12■□□□□ 0.17
MBD1-222ENST00000590208 TNS1Q9HBL0 1735 aaKnown RBP16.12■□□□□ 0.17
MBD1-222ENST00000590208 G3V2L1 256 aa16.12■□□□□ 0.17
MBD1-222ENST00000590208 MED7O43513 233 aa16.12■□□□□ 0.17
MBD1-222ENST00000590208 RAD17O75943 681 aa16.12■□□□□ 0.17
MBD1-222ENST00000590208 SLC5A3P53794 718 aa16.12■□□□□ 0.17
MBD1-222ENST00000590208 ART3Q13508 389 aa16.12■□□□□ 0.17
MBD1-222ENST00000590208 IKBKEQ14164 716 aa16.12■□□□□ 0.17
MBD1-222ENST00000590208 NXNQ6DKJ4 435 aa16.12■□□□□ 0.17
MBD1-222ENST00000590208 KRT80Q6KB66 452 aa16.12■□□□□ 0.17
MBD1-222ENST00000590208 VSIG10LQ86VR7 867 aa16.12■□□□□ 0.17
MBD1-222ENST00000590208 LZTR1Q8N653 840 aa16.12■□□□□ 0.17
MBD1-222ENST00000590208 ARNTL2Q8WYA1 636 aa16.12■□□□□ 0.17
MBD1-222ENST00000590208 UPF1Q92900 1129 aaKnown RBP eCLIP16.12■□□□□ 0.17
MBD1-222ENST00000590208 GATA5Q9BWX5 397 aaPredicted RBP16.12■□□□□ 0.17
MBD1-222ENST00000590208 MFHAS1Q9Y4C4 1052 aa16.12■□□□□ 0.17
MBD1-222ENST00000590208 GPR25O00155 361 aa16.11■□□□□ 0.17
MBD1-222ENST00000590208 TPSB2P20231 275 aa16.11■□□□□ 0.17
MBD1-222ENST00000590208 TGM2P21980 687 aa16.11■□□□□ 0.17
MBD1-222ENST00000590208 TPSAB1Q15661 275 aa16.11■□□□□ 0.17
MBD1-222ENST00000590208 XKR3Q5GH77 459 aa16.11■□□□□ 0.17
MBD1-222ENST00000590208 METTL21CQ5VZV1 264 aa16.11■□□□□ 0.17
MBD1-222ENST00000590208 KCNT2Q6UVM3 1135 aa16.11■□□□□ 0.17
MBD1-222ENST00000590208 ABHD15Q6UXT9 468 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms