RNA–Protein interactions for RNA: ENST00000589788.1

SDF2-208, Transcript of stromal cell derived factor 2, humanhuman

TSL 2

Gene SDF2, Length 1,342 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-208ENST00000589788 RAB23Q9ULC3 237 aa10.74□□□□□ -0.69
SDF2-208ENST00000589788 SLC27A6Q9Y2P4 619 aa10.74□□□□□ -0.69
SDF2-208ENST00000589788 WDFY4Q6ZS81 3184 aa10.73□□□□□ -0.69
SDF2-208ENST00000589788 CCDC163A0A0D9SF12 145 aa10.73□□□□□ -0.69
SDF2-208ENST00000589788 LRRC53A6NM62 1247 aa10.73□□□□□ -0.69
SDF2-208ENST00000589788 KCNU1A8MYU2 1149 aa10.73□□□□□ -0.69
SDF2-208ENST00000589788 PRRT4C9JH25 899 aa10.73□□□□□ -0.69
SDF2-208ENST00000589788 SGK1O00141 431 aa10.73□□□□□ -0.69
SDF2-208ENST00000589788 AXIN1O15169 862 aa10.73□□□□□ -0.69
SDF2-208ENST00000589788 CBFA2T2O43439 604 aa10.73□□□□□ -0.69
SDF2-208ENST00000589788 ALDH1A2O94788 518 aa10.73□□□□□ -0.69
SDF2-208ENST00000589788 F9P00740 461 aa10.73□□□□□ -0.69
SDF2-208ENST00000589788 TPM3P06753 285 aa10.73□□□□□ -0.69
SDF2-208ENST00000589788 TNFAIP3P21580 790 aa10.73□□□□□ -0.69
SDF2-208ENST00000589788 MMP8P22894 467 aa10.73□□□□□ -0.69
SDF2-208ENST00000589788 NTSR1P30989 418 aa10.73□□□□□ -0.69
SDF2-208ENST00000589788 HOXC13P31276 330 aa10.73□□□□□ -0.69
SDF2-208ENST00000589788 SLC6A4P31645 630 aa10.73□□□□□ -0.69
SDF2-208ENST00000589788 SULT1E1P49888 294 aa10.73□□□□□ -0.69
SDF2-208ENST00000589788 SGSHP51688 502 aa10.73□□□□□ -0.69
SDF2-208ENST00000589788 TEAD4Q15561 434 aa10.73□□□□□ -0.69
SDF2-208ENST00000589788 CRY1Q16526 586 aa10.73□□□□□ -0.69
SDF2-208ENST00000589788 CLEC16AQ2KHT3 1053 aa10.73□□□□□ -0.69
SDF2-208ENST00000589788 MS4A13Q5J8X5 152 aa10.73□□□□□ -0.69
SDF2-208ENST00000589788 MPP7Q5T2T1 576 aa10.73□□□□□ -0.69
SDF2-208ENST00000589788 SFMBT2Q5VUG0 894 aa10.73□□□□□ -0.69
SDF2-208ENST00000589788 EGFLAMQ63HQ2 1017 aa10.73□□□□□ -0.69
SDF2-208ENST00000589788 RAP1GAP2Q684P5 730 aa10.73□□□□□ -0.69
SDF2-208ENST00000589788 NADSYN1Q6IA69 706 aa10.73□□□□□ -0.69
SDF2-208ENST00000589788 PRR23BQ6ZRT6 265 aa10.73□□□□□ -0.69
SDF2-208ENST00000589788 CEP68Q76N32 757 aa10.73□□□□□ -0.69
SDF2-208ENST00000589788 ASCL5Q7RTU5 278 aa10.73□□□□□ -0.69
SDF2-208ENST00000589788 CHPFQ8IZ52 775 aa10.73□□□□□ -0.69
SDF2-208ENST00000589788 LGI2Q8N0V4 545 aa10.73□□□□□ -0.69
SDF2-208ENST00000589788 ZNF557Q8N988 423 aaPredicted RBP10.73□□□□□ -0.69
SDF2-208ENST00000589788 P2RY11Q96G91 374 aa10.73□□□□□ -0.69
SDF2-208ENST00000589788 MRFAP1L1Q96HT8 127 aa10.73□□□□□ -0.69
SDF2-208ENST00000589788 PCDHB18PQ96TA0 734 aa10.73□□□□□ -0.69
SDF2-208ENST00000589788 NPY6RQ99463 290 aa10.73□□□□□ -0.69
SDF2-208ENST00000589788 C11orf70Q9BRQ4 267 aa10.73□□□□□ -0.69
SDF2-208ENST00000589788 NUP58Q9BVL2 599 aa10.73□□□□□ -0.69
SDF2-208ENST00000589788 EDEM3Q9BZQ6 932 aa10.73□□□□□ -0.69
SDF2-208ENST00000589788 TRIM5Q9C035 493 aa10.73□□□□□ -0.69
SDF2-208ENST00000589788 NUCKS1Q9H1E3 243 aaKnown RBP10.73□□□□□ -0.69
SDF2-208ENST00000589788 ZDHHC4Q9NPG8 344 aa10.73□□□□□ -0.69
SDF2-208ENST00000589788 TMEM51Q9NW97 253 aa10.73□□□□□ -0.69
SDF2-208ENST00000589788 ADAM22Q9P0K1 906 aa10.73□□□□□ -0.69
SDF2-208ENST00000589788 IFNKQ9P0W0 207 aa10.73□□□□□ -0.69
SDF2-208ENST00000589788 XPO7Q9UIA9 1087 aaKnown RBP10.73□□□□□ -0.69
SDF2-208ENST00000589788 STARD13Q9Y3M8 1113 aa10.73□□□□□ -0.69
SDF2-208ENST00000589788 PAXBP1Q9Y5B6 917 aa10.73□□□□□ -0.69
SDF2-208ENST00000589788 PIEZO1Q92508 2521 aa10.73□□□□□ -0.69
SDF2-208ENST00000589788 F5H5T6 163 aa10.72□□□□□ -0.69
SDF2-208ENST00000589788 GFRA2O00451 464 aa10.72□□□□□ -0.69
SDF2-208ENST00000589788 SPINT1O43278 529 aa10.72□□□□□ -0.69
SDF2-208ENST00000589788 TIMM44O43615 452 aa10.72□□□□□ -0.69
SDF2-208ENST00000589788 ADAM23O75077 832 aa10.72□□□□□ -0.69
SDF2-208ENST00000589788 CALB1P05937 261 aa10.72□□□□□ -0.69
SDF2-208ENST00000589788 UNGP13051 313 aaPredicted RBP10.72□□□□□ -0.69
SDF2-208ENST00000589788 HOXB2P14652 356 aa10.72□□□□□ -0.69
SDF2-208ENST00000589788 TACR2P21452 398 aa10.72□□□□□ -0.69
SDF2-208ENST00000589788 WASP42768 502 aa10.72□□□□□ -0.69
SDF2-208ENST00000589788 ZNF75DP51815 510 aa10.72□□□□□ -0.69
SDF2-208ENST00000589788 RPS24P62847 133 aaKnown RBP10.72□□□□□ -0.69
SDF2-208ENST00000589788 DEUP1Q05D60 604 aa10.72□□□□□ -0.69
SDF2-208ENST00000589788 CDH18Q13634 790 aa10.72□□□□□ -0.69
SDF2-208ENST00000589788 SIM2Q14190 667 aaPredicted RBP10.72□□□□□ -0.69
SDF2-208ENST00000589788 EIF4HQ15056 248 aaKnown RBP10.72□□□□□ -0.69
SDF2-208ENST00000589788 GEN1Q17RS7 908 aa10.72□□□□□ -0.69
SDF2-208ENST00000589788 SLC25A52Q3SY17 297 aa10.72□□□□□ -0.69
SDF2-208ENST00000589788 ANO7Q6IWH7 933 aa10.72□□□□□ -0.69
SDF2-208ENST00000589788 C16orf46Q6P387 395 aa10.72□□□□□ -0.69
SDF2-208ENST00000589788 IRF2BP2Q7Z5L9 587 aa10.72□□□□□ -0.69
SDF2-208ENST00000589788 PHLDB2Q86SQ0 1253 aa10.72□□□□□ -0.69
SDF2-208ENST00000589788 PHF13Q86YI8 300 aaPredicted RBP10.72□□□□□ -0.69
SDF2-208ENST00000589788 MFN1Q8IWA4 741 aa10.72□□□□□ -0.69
SDF2-208ENST00000589788 PGBD3Q8N328 593 aa10.72□□□□□ -0.69
SDF2-208ENST00000589788 CARNMT1Q8N4J0 409 aa10.72□□□□□ -0.69
SDF2-208ENST00000589788 WFIKKN2Q8TEU8 576 aa10.72□□□□□ -0.69
SDF2-208ENST00000589788 ANP32BQ92688 251 aaKnown RBP10.72□□□□□ -0.69
SDF2-208ENST00000589788 PRICKLE1Q96MT3 831 aaPredicted RBP10.72□□□□□ -0.69
SDF2-208ENST00000589788 CIPCQ9C0C6 399 aa10.72□□□□□ -0.69
SDF2-208ENST00000589788 XPO4Q9C0E2 1151 aaKnown RBP10.72□□□□□ -0.69
SDF2-208ENST00000589788 EPC1Q9H2F5 836 aa10.72□□□□□ -0.69
SDF2-208ENST00000589788 METTL5Q9NRN9 209 aaKnown RBP10.72□□□□□ -0.69
SDF2-208ENST00000589788 ABCB8Q9NUT2 735 aa10.72□□□□□ -0.69
SDF2-208ENST00000589788 BCCIPQ9P287 314 aaKnown RBP eCLIP10.72□□□□□ -0.69
SDF2-208ENST00000589788 EBF1Q9UH73 591 aa10.72□□□□□ -0.69
SDF2-208ENST00000589788 CLEC4EQ9ULY5 219 aa10.72□□□□□ -0.69
SDF2-208ENST00000589788 SMG5Q9UPR3 1016 aaKnown RBP10.72□□□□□ -0.69
SDF2-208ENST00000589788 ZFHX2Q9C0A1 2572 aaPredicted RBP10.72□□□□□ -0.69
SDF2-208ENST00000589788 TCRBV21S2A2A0A5A6 115 aa10.71□□□□□ -0.69
SDF2-208ENST00000589788 NPC1O15118 1278 aa10.71□□□□□ -0.69
SDF2-208ENST00000589788 RPP40O75818 363 aaKnown RBP10.71□□□□□ -0.69
SDF2-208ENST00000589788 ADCY5O95622 1261 aa10.71□□□□□ -0.69
SDF2-208ENST00000589788 PABPC1P11940 636 aaKnown RBP10.71□□□□□ -0.69
SDF2-208ENST00000589788 HNRNPLP14866 589 aaKnown RBP eCLIP10.71□□□□□ -0.69
SDF2-208ENST00000589788 HLA-FP30511 346 aa10.71□□□□□ -0.69
SDF2-208ENST00000589788 FLT3P36888 993 aa10.71□□□□□ -0.69
SDF2-208ENST00000589788 SRSF5Q13243 272 aaKnown RBP10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms