RNA–Protein interactions for RNA: ENST00000589675.5

DDX39A-210, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 829 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-210ENST00000589675 TMEM131Q92545 1883 aa11.53□□□□□ -0.56
DDX39A-210ENST00000589675 TP53BP1Q12888 1972 aaPredicted RBP11.52□□□□□ -0.56
DDX39A-210ENST00000589675 LAMA5O15230 3695 aa11.52□□□□□ -0.56
DDX39A-210ENST00000589675 EDDM13A0A1B0GTR0 161 aa11.52□□□□□ -0.57
DDX39A-210ENST00000589675 C1QTNF9BB2RNN3 333 aa11.52□□□□□ -0.57
DDX39A-210ENST00000589675 F5H5T6 163 aa11.52□□□□□ -0.57
DDX39A-210ENST00000589675 CBFA2T3O75081 653 aa11.52□□□□□ -0.57
DDX39A-210ENST00000589675 SIN3BO75182 1162 aa11.52□□□□□ -0.57
DDX39A-210ENST00000589675 TOP3BO95985 862 aaKnown RBP11.52□□□□□ -0.57
DDX39A-210ENST00000589675 MOCS2O96007 188 aaPredicted RBP11.52□□□□□ -0.57
DDX39A-210ENST00000589675 C1QTNF9P0C862 333 aa11.52□□□□□ -0.57
DDX39A-210ENST00000589675 CD27P26842 260 aa11.52□□□□□ -0.57
DDX39A-210ENST00000589675 ERCC5P28715 1186 aaPredicted RBP11.52□□□□□ -0.57
DDX39A-210ENST00000589675 CCR1P32246 355 aa11.52□□□□□ -0.57
DDX39A-210ENST00000589675 CLCN1P35523 988 aa11.52□□□□□ -0.57
DDX39A-210ENST00000589675 USP8P40818 1118 aa11.52□□□□□ -0.57
DDX39A-210ENST00000589675 MTIF2P46199 727 aaKnown RBP11.52□□□□□ -0.57
DDX39A-210ENST00000589675 GRIA4P48058 902 aa11.52□□□□□ -0.57
DDX39A-210ENST00000589675 BPIFB4P59827 614 aa11.52□□□□□ -0.57
DDX39A-210ENST00000589675 FAM193AP78312 1265 aa11.52□□□□□ -0.57
DDX39A-210ENST00000589675 SULT2A1Q06520 285 aa11.52□□□□□ -0.57
DDX39A-210ENST00000589675 TAF5Q15542 800 aa11.52□□□□□ -0.57
DDX39A-210ENST00000589675 TEAD4Q15561 434 aa11.52□□□□□ -0.57
DDX39A-210ENST00000589675 MAN2A1Q16706 1144 aa11.52□□□□□ -0.57
DDX39A-210ENST00000589675 HLA-BQ31612 363 aa11.52□□□□□ -0.57
DDX39A-210ENST00000589675 RAP1GAP2Q684P5 730 aa11.52□□□□□ -0.57
DDX39A-210ENST00000589675 C11orf57Q6ZUT1 292 aaPredicted RBP11.52□□□□□ -0.57
DDX39A-210ENST00000589675 RAB44Q7Z6P3 723 aaPredicted RBP11.52□□□□□ -0.57
DDX39A-210ENST00000589675 CHSY1Q86X52 802 aa11.52□□□□□ -0.57
DDX39A-210ENST00000589675 CACUL1Q86Y37 369 aa11.52□□□□□ -0.57
DDX39A-210ENST00000589675 CREBRFQ8IUR6 639 aa11.52□□□□□ -0.57
DDX39A-210ENST00000589675 ZNF397Q8NF99 534 aaPredicted RBP11.52□□□□□ -0.57
DDX39A-210ENST00000589675 BIRC7Q96CA5 298 aa11.52□□□□□ -0.57
DDX39A-210ENST00000589675 NOX5Q96PH1 765 aa11.52□□□□□ -0.57
DDX39A-210ENST00000589675 PPP1R9BQ96SB3 815 aa11.52□□□□□ -0.57
DDX39A-210ENST00000589675 GAREM1Q9H706 876 aa11.52□□□□□ -0.57
DDX39A-210ENST00000589675 RRN3Q9NYV6 651 aa11.52□□□□□ -0.57
DDX39A-210ENST00000589675 ADAMTS1Q9UHI8 967 aa11.52□□□□□ -0.57
DDX39A-210ENST00000589675 FZD4Q9ULV1 537 aa11.52□□□□□ -0.57
DDX39A-210ENST00000589675 TPX2Q9ULW0 747 aaKnown RBP11.52□□□□□ -0.57
DDX39A-210ENST00000589675 PCDHB9Q9Y5E1 797 aa11.52□□□□□ -0.57
DDX39A-210ENST00000589675 ITPR1Q14643 2758 aa11.51□□□□□ -0.57
DDX39A-210ENST00000589675 PLXNA2O75051 1894 aa11.51□□□□□ -0.57
DDX39A-210ENST00000589675 PTPRBP23467 1997 aa11.51□□□□□ -0.57
DDX39A-210ENST00000589675 DOCK4Q8N1I0 1966 aa11.51□□□□□ -0.57
DDX39A-210ENST00000589675 A0A1B0GVM2 712 aa11.51□□□□□ -0.57
DDX39A-210ENST00000589675 TCAF2A6NFQ2 919 aa11.51□□□□□ -0.57
DDX39A-210ENST00000589675 FOXN3O00409 490 aaPredicted RBP11.51□□□□□ -0.57
DDX39A-210ENST00000589675 HYAL3O43820 417 aaPredicted RBP11.51□□□□□ -0.57
DDX39A-210ENST00000589675 SPINK2P20155 84 aa11.51□□□□□ -0.57
DDX39A-210ENST00000589675 ABCB4P21439 1286 aa11.51□□□□□ -0.57
DDX39A-210ENST00000589675 NOS2P35228 1153 aa11.51□□□□□ -0.57
DDX39A-210ENST00000589675 KRT9P35527 623 aa11.51□□□□□ -0.57
DDX39A-210ENST00000589675 CSNK1EP49674 416 aaKnown RBP11.51□□□□□ -0.57
DDX39A-210ENST00000589675 PITX1P78337 314 aaPredicted RBP11.51□□□□□ -0.57
DDX39A-210ENST00000589675 APBA1Q02410 837 aa11.51□□□□□ -0.57
DDX39A-210ENST00000589675 CST6Q15828 149 aa11.51□□□□□ -0.57
DDX39A-210ENST00000589675 TPD52L1Q16890 204 aaPredicted RBP11.51□□□□□ -0.57
DDX39A-210ENST00000589675 C5orf22Q49AR2 442 aa11.51□□□□□ -0.57
DDX39A-210ENST00000589675 CT47A1Q5JQC4 288 aaPredicted RBP11.51□□□□□ -0.57
DDX39A-210ENST00000589675 RABGAP1LQ5R372 815 aa11.51□□□□□ -0.57
DDX39A-210ENST00000589675 DPY19L2P1Q6NXN4 242 aa11.51□□□□□ -0.57
DDX39A-210ENST00000589675 OLFML1Q6UWY5 402 aa11.51□□□□□ -0.57
DDX39A-210ENST00000589675 MMS22LQ6ZRQ5 1243 aa11.51□□□□□ -0.57
DDX39A-210ENST00000589675 SLC26A9Q7LBE3 791 aa11.51□□□□□ -0.57
DDX39A-210ENST00000589675 ZDHHC17Q8IUH5 632 aa11.51□□□□□ -0.57
DDX39A-210ENST00000589675 FAM71AQ8IYT1 594 aa11.51□□□□□ -0.57
DDX39A-210ENST00000589675 APCDD1Q8J025 514 aa11.51□□□□□ -0.57
DDX39A-210ENST00000589675 DEFB106AQ8N104 65 aa11.51□□□□□ -0.57
DDX39A-210ENST00000589675 CCAR2Q8N163 923 aaKnown RBP11.51□□□□□ -0.57
DDX39A-210ENST00000589675 C1orf131Q8NDD1 294 aaKnown RBP11.51□□□□□ -0.57
DDX39A-210ENST00000589675 ADAMTS14Q8WXS8 1223 aa11.51□□□□□ -0.57
DDX39A-210ENST00000589675 CAMK1GQ96NX5 476 aa11.51□□□□□ -0.57
DDX39A-210ENST00000589675 FAM129BQ96TA1 746 aa11.51□□□□□ -0.57
DDX39A-210ENST00000589675 ORAI3Q9BRQ5 295 aa11.51□□□□□ -0.57
DDX39A-210ENST00000589675 NDST4Q9H3R1 872 aa11.51□□□□□ -0.57
DDX39A-210ENST00000589675 CLSTN2Q9H4D0 955 aa11.51□□□□□ -0.57
DDX39A-210ENST00000589675 MTG2Q9H4K7 406 aa11.51□□□□□ -0.57
DDX39A-210ENST00000589675 FAM204AQ9H8W3 233 aa11.51□□□□□ -0.57
DDX39A-210ENST00000589675 TM9SF3Q9HD45 589 aa11.51□□□□□ -0.57
DDX39A-210ENST00000589675 TM7SF3Q9NS93 570 aa11.51□□□□□ -0.57
DDX39A-210ENST00000589675 DDIT4Q9NX09 232 aa11.51□□□□□ -0.57
DDX39A-210ENST00000589675 FBXL12Q9NXK8 326 aa11.51□□□□□ -0.57
DDX39A-210ENST00000589675 DNAJC12Q9UKB3 198 aa11.51□□□□□ -0.57
DDX39A-210ENST00000589675 PCOLCE2Q9UKZ9 415 aa11.51□□□□□ -0.57
DDX39A-210ENST00000589675 PLXNB3Q9ULL4 1909 aa11.5□□□□□ -0.57
DDX39A-210ENST00000589675 KNTC1P50748 2209 aa11.5□□□□□ -0.57
DDX39A-210ENST00000589675 A0A1B0GVT2 93 aa11.5□□□□□ -0.57
DDX39A-210ENST00000589675 TTC34A8MYJ7 566 aa11.5□□□□□ -0.57
DDX39A-210ENST00000589675 FLRT2O43155 660 aa11.5□□□□□ -0.57
DDX39A-210ENST00000589675 DFNA5O60443 496 aa11.5□□□□□ -0.57
DDX39A-210ENST00000589675 DAB1O75553 588 aa11.5□□□□□ -0.57
DDX39A-210ENST00000589675 ADH1BP00325 375 aa11.5□□□□□ -0.57
DDX39A-210ENST00000589675 IGHV4-34P06331 123 aa11.5□□□□□ -0.57
DDX39A-210ENST00000589675 C5AR1P21730 350 aa11.5□□□□□ -0.57
DDX39A-210ENST00000589675 SLC8A1P32418 973 aa11.5□□□□□ -0.57
DDX39A-210ENST00000589675 CDH5P33151 784 aaPredicted RBP11.5□□□□□ -0.57
DDX39A-210ENST00000589675 SCNN1AP37088 669 aa11.5□□□□□ -0.57
DDX39A-210ENST00000589675 NNMTP40261 264 aa11.5□□□□□ -0.57
DDX39A-210ENST00000589675 CTSOP43234 321 aaPredicted RBP11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms