RNA–Protein interactions for RNA: ENST00000589294.1

DNMT1-218, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-218ENST00000589294 ZSCAN30Q86W11 494 aa12.52□□□□□ -0.41
DNMT1-218ENST00000589294 NLRP14Q86W24 1093 aa12.52□□□□□ -0.41
DNMT1-218ENST00000589294 SUGP1Q8IWZ8 645 aaKnown RBP12.52□□□□□ -0.41
DNMT1-218ENST00000589294 ETFBKMTQ8IXQ9 262 aa12.52□□□□□ -0.41
DNMT1-218ENST00000589294 SLC35F6Q8N357 371 aa12.52□□□□□ -0.41
DNMT1-218ENST00000589294 C17orf53Q8N3J3 647 aaPredicted RBP12.52□□□□□ -0.41
DNMT1-218ENST00000589294 LZTR1Q8N653 840 aa12.52□□□□□ -0.41
DNMT1-218ENST00000589294 TTC8Q8TAM2 541 aa12.52□□□□□ -0.41
DNMT1-218ENST00000589294 ALG3Q92685 438 aa12.52□□□□□ -0.41
DNMT1-218ENST00000589294 RNF25Q96BH1 459 aaPredicted RBP12.52□□□□□ -0.41
DNMT1-218ENST00000589294 P2RY11Q96G91 374 aa12.52□□□□□ -0.41
DNMT1-218ENST00000589294 RNF157Q96PX1 679 aa12.52□□□□□ -0.41
DNMT1-218ENST00000589294 UHRF1Q96T88 793 aaPredicted RBP12.52□□□□□ -0.41
DNMT1-218ENST00000589294 TLR10Q9BXR5 811 aa12.52□□□□□ -0.41
DNMT1-218ENST00000589294 PLK2Q9NYY3 685 aa12.52□□□□□ -0.41
DNMT1-218ENST00000589294 MPP6Q9NZW5 540 aa12.52□□□□□ -0.41
DNMT1-218ENST00000589294 KIAA1522Q9P206 1035 aaPredicted RBP12.52□□□□□ -0.41
DNMT1-218ENST00000589294 ZNF212Q9UDV6 495 aa12.52□□□□□ -0.41
DNMT1-218ENST00000589294 NEU3Q9UQ49 428 aa12.52□□□□□ -0.41
DNMT1-218ENST00000589294 SLC27A6Q9Y2P4 619 aa12.52□□□□□ -0.41
DNMT1-218ENST00000589294 KIF26AQ9ULI4 1882 aaPredicted RBP12.52□□□□□ -0.41
DNMT1-218ENST00000589294 A0A0C4DFX4 3053 aa12.52□□□□□ -0.41
DNMT1-218ENST00000589294 TCF20Q9UGU0 1960 aaKnown RBP12.52□□□□□ -0.41
DNMT1-218ENST00000589294 ILVBLA1L0T0 632 aa12.51□□□□□ -0.41
DNMT1-218ENST00000589294 SPECC1L-ADORA2AF8WAN1 911 aa12.51□□□□□ -0.41
DNMT1-218ENST00000589294 PI4K2BG5E9Z4 385 aa12.51□□□□□ -0.41
DNMT1-218ENST00000589294 TIMM44O43615 452 aa12.51□□□□□ -0.41
DNMT1-218ENST00000589294 TULP3O75386 442 aa12.51□□□□□ -0.41
DNMT1-218ENST00000589294 PYGMP11217 842 aa12.51□□□□□ -0.41
DNMT1-218ENST00000589294 ZFXP17010 805 aaPredicted RBP12.51□□□□□ -0.41
DNMT1-218ENST00000589294 ERCC2P18074 760 aa12.51□□□□□ -0.41
DNMT1-218ENST00000589294 PTPN7P35236 360 aa12.51□□□□□ -0.41
DNMT1-218ENST00000589294 DEKP35659 375 aaKnown RBP12.51□□□□□ -0.41
DNMT1-218ENST00000589294 MARCKSL1P49006 195 aa12.51□□□□□ -0.41
DNMT1-218ENST00000589294 PLK1P53350 603 aa12.51□□□□□ -0.41
DNMT1-218ENST00000589294 YBEYP58557 167 aaPredicted RBP12.51□□□□□ -0.41
DNMT1-218ENST00000589294 ETF1P62495 437 aaKnown RBP12.51□□□□□ -0.41
DNMT1-218ENST00000589294 PRKCQQ04759 706 aa12.51□□□□□ -0.41
DNMT1-218ENST00000589294 CDH18Q13634 790 aa12.51□□□□□ -0.41
DNMT1-218ENST00000589294 TFDP2Q14188 446 aa12.51□□□□□ -0.41
DNMT1-218ENST00000589294 PPP2R5EQ16537 467 aa12.51□□□□□ -0.41
DNMT1-218ENST00000589294 MFSD7Q6UXD7 560 aa12.51□□□□□ -0.41
DNMT1-218ENST00000589294 SPOCD1Q6ZMY3 1216 aa12.51□□□□□ -0.41
DNMT1-218ENST00000589294 NUDT18Q6ZVK8 323 aa12.51□□□□□ -0.41
DNMT1-218ENST00000589294 KIAA0907Q7Z7F0 614 aaPredicted RBP12.51□□□□□ -0.41
DNMT1-218ENST00000589294 MFN1Q8IWA4 741 aa12.51□□□□□ -0.41
DNMT1-218ENST00000589294 UMODL1-AS1Q8N2C9 162 aa12.51□□□□□ -0.41
DNMT1-218ENST00000589294 CARNMT1Q8N4J0 409 aa12.51□□□□□ -0.41
DNMT1-218ENST00000589294 NAT16Q8N8M0 369 aa12.51□□□□□ -0.41
DNMT1-218ENST00000589294 RTL3Q8N8U3 475 aaKnown RBP12.51□□□□□ -0.41
DNMT1-218ENST00000589294 PCDH19Q8TAB3 1148 aa12.51□□□□□ -0.41
DNMT1-218ENST00000589294 BHMTQ93088 406 aa12.51□□□□□ -0.41
DNMT1-218ENST00000589294 SHDQ96IW2 340 aa12.51□□□□□ -0.41
DNMT1-218ENST00000589294 PNKPQ96T60 521 aa12.51□□□□□ -0.41
DNMT1-218ENST00000589294 CARD9Q9H257 536 aa12.51□□□□□ -0.41
DNMT1-218ENST00000589294 ARHGEF4Q9NR80 690 aa12.51□□□□□ -0.41
DNMT1-218ENST00000589294 HEBP1Q9NRV9 189 aa12.51□□□□□ -0.41
DNMT1-218ENST00000589294 DNAJC17Q9NVM6 304 aaKnown RBP12.51□□□□□ -0.41
DNMT1-218ENST00000589294 KLHL11Q9NVR0 708 aa12.51□□□□□ -0.41
DNMT1-218ENST00000589294 PACSIN2Q9UNF0 486 aaPredicted RBP12.51□□□□□ -0.41
DNMT1-218ENST00000589294 PIAS3Q9Y6X2 628 aa12.51□□□□□ -0.41
DNMT1-218ENST00000589294 DCLK1O15075 740 aa12.5□□□□□ -0.41
DNMT1-218ENST00000589294 PRLRP16471 622 aa12.5□□□□□ -0.41
DNMT1-218ENST00000589294 AMPD1P23109 780 aa12.5□□□□□ -0.41
DNMT1-218ENST00000589294 CTHP32929 405 aa12.5□□□□□ -0.41
DNMT1-218ENST00000589294 ETFBP38117 255 aa12.5□□□□□ -0.41
DNMT1-218ENST00000589294 OPRD1P41143 372 aa12.5□□□□□ -0.41
DNMT1-218ENST00000589294 GRIA2P42262 883 aa12.5□□□□□ -0.41
DNMT1-218ENST00000589294 SLC6A11P48066 632 aa12.5□□□□□ -0.41
DNMT1-218ENST00000589294 DGKGP49619 791 aa12.5□□□□□ -0.41
DNMT1-218ENST00000589294 GALK1P51570 392 aa12.5□□□□□ -0.41
DNMT1-218ENST00000589294 IRAK1P51617 712 aa12.5□□□□□ -0.41
DNMT1-218ENST00000589294 NDST2P52849 883 aa12.5□□□□□ -0.41
DNMT1-218ENST00000589294 ZXDAP98168 799 aa12.5□□□□□ -0.41
DNMT1-218ENST00000589294 MMRN1Q13201 1228 aa12.5□□□□□ -0.41
DNMT1-218ENST00000589294 DMC1Q14565 340 aa12.5□□□□□ -0.41
DNMT1-218ENST00000589294 MLF2Q15773 248 aaPredicted RBP12.5□□□□□ -0.41
DNMT1-218ENST00000589294 FSCBQ5H9T9 825 aa12.5□□□□□ -0.41
DNMT1-218ENST00000589294 GRAMD4Q6IC98 578 aa12.5□□□□□ -0.41
DNMT1-218ENST00000589294 CXorf57Q6NSI4 855 aaKnown RBP12.5□□□□□ -0.41
DNMT1-218ENST00000589294 TMCO3Q6UWJ1 677 aa12.5□□□□□ -0.41
DNMT1-218ENST00000589294 ZNF852Q6ZMS4 543 aa12.5□□□□□ -0.41
DNMT1-218ENST00000589294 NYAP1Q6ZVC0 841 aa12.5□□□□□ -0.41
DNMT1-218ENST00000589294 TFAP2DQ7Z6R9 452 aa12.5□□□□□ -0.41
DNMT1-218ENST00000589294 CIR1Q86X95 450 aaPredicted RBP12.5□□□□□ -0.41
DNMT1-218ENST00000589294 CCDC50Q8IVM0 306 aa12.5□□□□□ -0.41
DNMT1-218ENST00000589294 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.5□□□□□ -0.41
DNMT1-218ENST00000589294 PBKQ96KB5 322 aa12.5□□□□□ -0.41
DNMT1-218ENST00000589294 LMLNQ96KR4 655 aa12.5□□□□□ -0.41
DNMT1-218ENST00000589294 NECAB3Q96P71 396 aaPredicted RBP12.5□□□□□ -0.41
DNMT1-218ENST00000589294 NELL2Q99435 816 aa12.5□□□□□ -0.41
DNMT1-218ENST00000589294 P2RY13Q9BPV8 354 aa12.5□□□□□ -0.41
DNMT1-218ENST00000589294 FEM1AQ9BSK4 669 aa12.5□□□□□ -0.41
DNMT1-218ENST00000589294 MAGEH1Q9H213 219 aa12.5□□□□□ -0.41
DNMT1-218ENST00000589294 MUTYHQ9UIF7 546 aa12.5□□□□□ -0.41
DNMT1-218ENST00000589294 FBXL21Q9UKT6 434 aa12.5□□□□□ -0.41
DNMT1-218ENST00000589294 CLEC4EQ9ULY5 219 aa12.5□□□□□ -0.41
DNMT1-218ENST00000589294 hCG_1818297A0A087WSY0 165 aa12.49□□□□□ -0.41
DNMT1-218ENST00000589294 CTAGE9A4FU28 777 aa12.49□□□□□ -0.41
DNMT1-218ENST00000589294 KCNK3O14649 394 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms