RNA–Protein interactions for RNA: ENST00000589201.1

LINC00654-202, long intergenic non-protein coding RNA 654, humanhuman

TSL 3 BASIC

Gene LINC00654, Length 579 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00654-202ENST00000589201 DDX3XO00571 662 aaKnown RBP eCLIP20.48■□□□□ 0.87
LINC00654-202ENST00000589201 CNTN5O94779 1100 aa20.48■□□□□ 0.87
LINC00654-202ENST00000589201 GPD1P21695 349 aa20.48■□□□□ 0.87
LINC00654-202ENST00000589201 TGM1P22735 817 aa20.48■□□□□ 0.87
LINC00654-202ENST00000589201 CTSOP43234 321 aaPredicted RBP20.48■□□□□ 0.87
LINC00654-202ENST00000589201 NUMBP49757 651 aa20.48■□□□□ 0.87
LINC00654-202ENST00000589201 ZBED6P86452 979 aa20.48■□□□□ 0.87
LINC00654-202ENST00000589201 SPEM2Q0P670 501 aa20.48■□□□□ 0.87
LINC00654-202ENST00000589201 ELF2Q15723 593 aa20.48■□□□□ 0.87
LINC00654-202ENST00000589201 PPP1R15BQ5SWA1 713 aa20.48■□□□□ 0.87
LINC00654-202ENST00000589201 CXorf57Q6NSI4 855 aaKnown RBP20.48■□□□□ 0.87
LINC00654-202ENST00000589201 LOXL4Q96JB6 756 aa20.48■□□□□ 0.87
LINC00654-202ENST00000589201 VCPIP1Q96JH7 1222 aa20.48■□□□□ 0.87
LINC00654-202ENST00000589201 HAPLN3Q96S86 360 aa20.48■□□□□ 0.87
LINC00654-202ENST00000589201 MKRN2Q9H000 416 aaKnown RBP20.48■□□□□ 0.87
LINC00654-202ENST00000589201 PARD6AQ9NPB6 346 aa20.48■□□□□ 0.87
LINC00654-202ENST00000589201 MBD1Q9UIS9 605 aaPredicted RBP20.48■□□□□ 0.87
LINC00654-202ENST00000589201 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP20.47■□□□□ 0.87
LINC00654-202ENST00000589201 DRGXA6NNA5 263 aa20.47■□□□□ 0.87
LINC00654-202ENST00000589201 RHOBTB1O94844 696 aa20.47■□□□□ 0.87
LINC00654-202ENST00000589201 MOCS3O95396 460 aa20.47■□□□□ 0.87
LINC00654-202ENST00000589201 GYPCP04921 128 aa20.47■□□□□ 0.87
LINC00654-202ENST00000589201 MZF1P28698 734 aaPredicted RBP20.47■□□□□ 0.87
LINC00654-202ENST00000589201 RPL7AP62424 266 aaKnown RBP20.47■□□□□ 0.87
LINC00654-202ENST00000589201 ZNF177Q13360 481 aaPredicted RBP20.47■□□□□ 0.87
LINC00654-202ENST00000589201 BYSLQ13895 437 aaKnown RBP20.47■□□□□ 0.87
LINC00654-202ENST00000589201 PLEKHG6Q3KR16 790 aa20.47■□□□□ 0.87
LINC00654-202ENST00000589201 ALFQ53S48 1182 aa20.47■□□□□ 0.87
LINC00654-202ENST00000589201 ARTNQ5T4W7 220 aa20.47■□□□□ 0.87
LINC00654-202ENST00000589201 HGSNATQ68CP4 663 aa20.47■□□□□ 0.87
LINC00654-202ENST00000589201 PPP1R2P3Q6NXS1 205 aa20.47■□□□□ 0.87
LINC00654-202ENST00000589201 STRADAQ7RTN6 431 aa20.47■□□□□ 0.87
LINC00654-202ENST00000589201 C11orf74Q86VG3 221 aa20.47■□□□□ 0.87
LINC00654-202ENST00000589201 TMPRSS6Q8IU80 811 aa20.47■□□□□ 0.87
LINC00654-202ENST00000589201 OR52K2Q8NGK3 314 aa20.47■□□□□ 0.87
LINC00654-202ENST00000589201 FAM172AQ8WUF8 416 aa20.47■□□□□ 0.87
LINC00654-202ENST00000589201 SYN2Q92777 582 aaPredicted RBP20.47■□□□□ 0.87
LINC00654-202ENST00000589201 IQCDQ96DY2 449 aa20.47■□□□□ 0.87
LINC00654-202ENST00000589201 MYO19Q96H55 970 aa20.47■□□□□ 0.87
LINC00654-202ENST00000589201 SPACA7Q96KW9 195 aa20.47■□□□□ 0.87
LINC00654-202ENST00000589201 MRGPRX3Q96LB0 322 aa20.47■□□□□ 0.87
LINC00654-202ENST00000589201 MCEEQ96PE7 176 aa20.47■□□□□ 0.87
LINC00654-202ENST00000589201 ARRDC1-AS1Q9H2J1 176 aa20.47■□□□□ 0.87
LINC00654-202ENST00000589201 PRDM16Q9HAZ2 1276 aa20.47■□□□□ 0.87
LINC00654-202ENST00000589201 THADAQ6YHU6 1953 aa20.46■□□□□ 0.87
LINC00654-202ENST00000589201 CKAP5Q14008 2032 aa20.46■□□□□ 0.87
LINC00654-202ENST00000589201 MAP3K13O43283 966 aa20.46■□□□□ 0.87
LINC00654-202ENST00000589201 SRGAP2O75044 1071 aa20.46■□□□□ 0.87
LINC00654-202ENST00000589201 CLDN11O75508 207 aa20.46■□□□□ 0.87
LINC00654-202ENST00000589201 FTLP02792 175 aaPredicted RBP20.46■□□□□ 0.87
LINC00654-202ENST00000589201 ASLP04424 464 aa20.46■□□□□ 0.87
LINC00654-202ENST00000589201 TPM3P06753 285 aa20.46■□□□□ 0.87
LINC00654-202ENST00000589201 GZMAP12544 262 aa20.46■□□□□ 0.87
LINC00654-202ENST00000589201 ADRA1BP35368 520 aa20.46■□□□□ 0.87
LINC00654-202ENST00000589201 COPAP53621 1224 aa20.46■□□□□ 0.87
LINC00654-202ENST00000589201 CDH4P55283 916 aa20.46■□□□□ 0.87
LINC00654-202ENST00000589201 HDAC4P56524 1084 aa20.46■□□□□ 0.87
LINC00654-202ENST00000589201 CAMK2GQ13555 558 aaPredicted RBP20.46■□□□□ 0.87
LINC00654-202ENST00000589201 SLC12A1Q13621 1099 aa20.46■□□□□ 0.87
LINC00654-202ENST00000589201 ACBD5Q5T8D3 534 aaPredicted RBP20.46■□□□□ 0.87
LINC00654-202ENST00000589201 PMS2CLQ68D20 193 aa20.46■□□□□ 0.87
LINC00654-202ENST00000589201 KIAA1324Q6UXG2 1013 aaKnown RBP20.46■□□□□ 0.87
LINC00654-202ENST00000589201 LRRC31Q6UY01 552 aa20.46■□□□□ 0.87
LINC00654-202ENST00000589201 CD93Q9NPY3 652 aa20.46■□□□□ 0.87
LINC00654-202ENST00000589201 ERVW-1Q9UQF0 538 aa20.46■□□□□ 0.87
LINC00654-202ENST00000589201 LUC7L2Q9Y383 392 aaKnown RBP20.46■□□□□ 0.87
LINC00654-202ENST00000589201 ITIH6Q6UXX5 1313 aa20.46■□□□□ 0.87
LINC00654-202ENST00000589201 MUC22E2RYF6 1773 aaPredicted RBP20.46■□□□□ 0.87
LINC00654-202ENST00000589201 RALGAPA1Q6GYQ0 2036 aa20.45■□□□□ 0.86
LINC00654-202ENST00000589201 E9PAM4 449 aa20.45■□□□□ 0.86
LINC00654-202ENST00000589201 ZNF217O75362 1048 aa20.45■□□□□ 0.86
LINC00654-202ENST00000589201 EPN2O95208 641 aa20.45■□□□□ 0.86
LINC00654-202ENST00000589201 ZNF143P52747 638 aaPredicted RBP20.45■□□□□ 0.86
LINC00654-202ENST00000589201 PLK1P53350 603 aa20.45■□□□□ 0.86
LINC00654-202ENST00000589201 ST8SIA6P61647 398 aa20.45■□□□□ 0.86
LINC00654-202ENST00000589201 ECT2LQ008S8 904 aa20.45■□□□□ 0.86
LINC00654-202ENST00000589201 MAMLD1Q13495 774 aa20.45■□□□□ 0.86
LINC00654-202ENST00000589201 ARL13BQ3SXY8 428 aa20.45■□□□□ 0.86
LINC00654-202ENST00000589201 TDRD12Q587J7 1177 aaKnown RBP20.45■□□□□ 0.86
LINC00654-202ENST00000589201 DCUN1D2Q6PH85 259 aa20.45■□□□□ 0.86
LINC00654-202ENST00000589201 ALG14Q96F25 216 aa20.45■□□□□ 0.86
LINC00654-202ENST00000589201 RPL10LQ96L21 214 aaKnown RBP20.45■□□□□ 0.86
LINC00654-202ENST00000589201 FEM1AQ9BSK4 669 aa20.45■□□□□ 0.86
LINC00654-202ENST00000589201 MAGEB5Q9BZ81 275 aa20.45■□□□□ 0.86
LINC00654-202ENST00000589201 MTG2Q9H4K7 406 aa20.45■□□□□ 0.86
LINC00654-202ENST00000589201 PRSS16Q9NQE7 514 aa20.45■□□□□ 0.86
LINC00654-202ENST00000589201 PARVAQ9NVD7 372 aa20.45■□□□□ 0.86
LINC00654-202ENST00000589201 MPP6Q9NZW5 540 aa20.45■□□□□ 0.86
LINC00654-202ENST00000589201 SUN2Q9UH99 717 aa20.45■□□□□ 0.86
LINC00654-202ENST00000589201 SLCO3A1Q9UIG8 710 aa20.45■□□□□ 0.86
LINC00654-202ENST00000589201 CYP8B1Q9UNU6 501 aa20.45■□□□□ 0.86
LINC00654-202ENST00000589201 TBC1D30Q9Y2I9 924 aa20.45■□□□□ 0.86
LINC00654-202ENST00000589201 BZW2Q9Y6E2 419 aaKnown RBP20.45■□□□□ 0.86
LINC00654-202ENST00000589201 IGLV3-10A0A075B6K4 115 aa20.44■□□□□ 0.86
LINC00654-202ENST00000589201 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa20.44■□□□□ 0.86
LINC00654-202ENST00000589201 IGHV1OR15-9A0A0B4J2B8 117 aa20.44■□□□□ 0.86
LINC00654-202ENST00000589201 ANKRD62A6NC57 917 aa20.44■□□□□ 0.86
LINC00654-202ENST00000589201 CCP110O43303 1012 aa20.44■□□□□ 0.86
LINC00654-202ENST00000589201 ATMINO43313 823 aaPredicted RBP20.44■□□□□ 0.86
LINC00654-202ENST00000589201 CBFA2T2O43439 604 aa20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms