RNA–Protein interactions for RNA: ENST00000588289.1

TMED1-204, Transcript of transmembrane p24 trafficking protein 1, humanhuman

TSL 2 BASIC

Gene TMED1, Length 541 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED1-204ENST00000588289 NPNTQ6UXI9 565 aa13.03□□□□□ -0.32
TMED1-204ENST00000588289 SPATA31D4Q6ZUB0 917 aa13.03□□□□□ -0.32
TMED1-204ENST00000588289 TRMT10CQ7L0Y3 403 aaKnown RBP13.03□□□□□ -0.32
TMED1-204ENST00000588289 ZNF354CQ86Y25 554 aa13.03□□□□□ -0.32
TMED1-204ENST00000588289 CCDC13Q8IYE1 715 aa13.03□□□□□ -0.32
TMED1-204ENST00000588289 PDIK1LQ8N165 341 aa13.03□□□□□ -0.32
TMED1-204ENST00000588289 EXOC4Q96A65 974 aa13.03□□□□□ -0.32
TMED1-204ENST00000588289 CCDC77Q9BR77 488 aa13.03□□□□□ -0.32
TMED1-204ENST00000588289 TMEM248Q9NWD8 314 aa13.03□□□□□ -0.32
TMED1-204ENST00000588289 SAE1Q9UBE0 346 aaPredicted RBP13.03□□□□□ -0.32
TMED1-204ENST00000588289 VANGL2Q9ULK5 521 aa13.03□□□□□ -0.32
TMED1-204ENST00000588289 HPCAL4Q9UM19 191 aa13.03□□□□□ -0.32
TMED1-204ENST00000588289 NUP210Q8TEM1 1887 aaPredicted RBP13.03□□□□□ -0.32
TMED1-204ENST00000588289 IGLV3-10A0A075B6K4 115 aa13.02□□□□□ -0.33
TMED1-204ENST00000588289 A0A0A0MRY4 1105 aa13.02□□□□□ -0.33
TMED1-204ENST00000588289 ERI2A8K979 691 aaKnown RBP13.02□□□□□ -0.33
TMED1-204ENST00000588289 BHMG1C9JSJ3 638 aaPredicted RBP13.02□□□□□ -0.33
TMED1-204ENST00000588289 CCL16O15467 120 aa13.02□□□□□ -0.33
TMED1-204ENST00000588289 TBX18O95935 607 aa13.02□□□□□ -0.33
TMED1-204ENST00000588289 RBL1P28749 1068 aa13.02□□□□□ -0.33
TMED1-204ENST00000588289 OR1E1P30953 314 aa13.02□□□□□ -0.33
TMED1-204ENST00000588289 CDH4P55283 916 aa13.02□□□□□ -0.33
TMED1-204ENST00000588289 EIF3BP55884 814 aaKnown RBP13.02□□□□□ -0.33
TMED1-204ENST00000588289 SLC7A9P82251 487 aa13.02□□□□□ -0.33
TMED1-204ENST00000588289 SMAD3P84022 425 aaKnown RBP13.02□□□□□ -0.33
TMED1-204ENST00000588289 DHX9Q08211 1270 aaKnown RBP13.02□□□□□ -0.33
TMED1-204ENST00000588289 CASP8Q14790 479 aa13.02□□□□□ -0.33
TMED1-204ENST00000588289 PRKD1Q15139 912 aaPredicted RBP13.02□□□□□ -0.33
TMED1-204ENST00000588289 DNAJC21Q5F1R6 531 aaKnown RBP13.02□□□□□ -0.33
TMED1-204ENST00000588289 RAP1GAP2Q684P5 730 aa13.02□□□□□ -0.33
TMED1-204ENST00000588289 DENND2CQ68D51 928 aa13.02□□□□□ -0.33
TMED1-204ENST00000588289 CHST9Q7L1S5 443 aa13.02□□□□□ -0.33
TMED1-204ENST00000588289 TDHQ8IZJ6 230 aa13.02□□□□□ -0.33
TMED1-204ENST00000588289 UMODL1-AS1Q8N2C9 162 aa13.02□□□□□ -0.33
TMED1-204ENST00000588289 ZCCHC9Q8N567 271 aaKnown RBP13.02□□□□□ -0.33
TMED1-204ENST00000588289 HJURPQ8NCD3 748 aaPredicted RBP13.02□□□□□ -0.33
TMED1-204ENST00000588289 FBXO25Q8TCJ0 367 aa13.02□□□□□ -0.33
TMED1-204ENST00000588289 ARNTL2Q8WYA1 636 aa13.02□□□□□ -0.33
TMED1-204ENST00000588289 FATE1Q969F0 183 aa13.02□□□□□ -0.33
TMED1-204ENST00000588289 SPATA13Q96N96 652 aa13.02□□□□□ -0.33
TMED1-204ENST00000588289 GDF15Q99988 308 aa13.02□□□□□ -0.33
TMED1-204ENST00000588289 KLF16Q9BXK1 252 aaPredicted RBP13.02□□□□□ -0.33
TMED1-204ENST00000588289 PBX4Q9BYU1 374 aa13.02□□□□□ -0.33
TMED1-204ENST00000588289 PRKD2Q9BZL6 878 aa13.02□□□□□ -0.33
TMED1-204ENST00000588289 NKX2-4Q9H2Z4 354 aa13.02□□□□□ -0.33
TMED1-204ENST00000588289 PRDM12Q9H4Q4 367 aa13.02□□□□□ -0.33
TMED1-204ENST00000588289 TASP1Q9H6P5 420 aa13.02□□□□□ -0.33
TMED1-204ENST00000588289 KIF9Q9HAQ2 790 aa13.02□□□□□ -0.33
TMED1-204ENST00000588289 SP110Q9HB58 689 aa13.02□□□□□ -0.33
TMED1-204ENST00000588289 PRDM6Q9NQX0 595 aa13.02□□□□□ -0.33
TMED1-204ENST00000588289 SEPT10Q9P0V9 454 aa13.02□□□□□ -0.33
TMED1-204ENST00000588289 KLHL8Q9P2G9 620 aaPredicted RBP13.02□□□□□ -0.33
TMED1-204ENST00000588289 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.01□□□□□ -0.33
TMED1-204ENST00000588289 A0A1B0GVM2 712 aa13.01□□□□□ -0.33
TMED1-204ENST00000588289 TCAF2A6NFQ2 919 aa13.01□□□□□ -0.33
TMED1-204ENST00000588289 ZSCAN5CA6NGD5 496 aaPredicted RBP13.01□□□□□ -0.33
TMED1-204ENST00000588289 RNF103O00237 685 aa13.01□□□□□ -0.33
TMED1-204ENST00000588289 DFFAO00273 331 aa13.01□□□□□ -0.33
TMED1-204ENST00000588289 SLC9A3R1O14745 358 aaPredicted RBP13.01□□□□□ -0.33
TMED1-204ENST00000588289 RAMP2O60895 175 aa13.01□□□□□ -0.33
TMED1-204ENST00000588289 PPFIA2O75334 1257 aa13.01□□□□□ -0.33
TMED1-204ENST00000588289 STC2O76061 302 aa13.01□□□□□ -0.33
TMED1-204ENST00000588289 CSPG5O95196 566 aa13.01□□□□□ -0.33
TMED1-204ENST00000588289 OLFM2O95897 454 aa13.01□□□□□ -0.33
TMED1-204ENST00000588289 IVLP07476 585 aa13.01□□□□□ -0.33
TMED1-204ENST00000588289 MYOGP15173 224 aa13.01□□□□□ -0.33
TMED1-204ENST00000588289 PHBP35232 272 aa13.01□□□□□ -0.33
TMED1-204ENST00000588289 HSPA9P38646 679 aaKnown RBP13.01□□□□□ -0.33
TMED1-204ENST00000588289 RENBPP51606 427 aa13.01□□□□□ -0.33
TMED1-204ENST00000588289 EPHA5P54756 1037 aa13.01□□□□□ -0.33
TMED1-204ENST00000588289 IFFO1Q0D2I5 559 aa13.01□□□□□ -0.33
TMED1-204ENST00000588289 ZNF177Q13360 481 aaPredicted RBP13.01□□□□□ -0.33
TMED1-204ENST00000588289 HIF1AQ16665 826 aa13.01□□□□□ -0.33
TMED1-204ENST00000588289 DUSP6Q16828 381 aa13.01□□□□□ -0.33
TMED1-204ENST00000588289 PIK3R6Q5UE93 754 aa13.01□□□□□ -0.33
TMED1-204ENST00000588289 HIBCHQ6NVY1 386 aaPredicted RBP13.01□□□□□ -0.33
TMED1-204ENST00000588289 ZNF783Q6ZMS7 281 aa13.01□□□□□ -0.33
TMED1-204ENST00000588289 SETD3Q86TU7 594 aaPredicted RBP13.01□□□□□ -0.33
TMED1-204ENST00000588289 CCDC25Q86WR0 208 aa13.01□□□□□ -0.33
TMED1-204ENST00000588289 DENND1CQ8IV53 801 aa13.01□□□□□ -0.33
TMED1-204ENST00000588289 LGI2Q8N0V4 545 aa13.01□□□□□ -0.33
TMED1-204ENST00000588289 KIAA1958Q8N8K9 716 aa13.01□□□□□ -0.33
TMED1-204ENST00000588289 UBLCP1Q8WVY7 318 aaPredicted RBP13.01□□□□□ -0.33
TMED1-204ENST00000588289 TIFAQ96CG3 184 aa13.01□□□□□ -0.33
TMED1-204ENST00000588289 TSGA13Q96PP4 275 aa13.01□□□□□ -0.33
TMED1-204ENST00000588289 MAGEH1Q9H213 219 aa13.01□□□□□ -0.33
TMED1-204ENST00000588289 MED4Q9NPJ6 270 aa13.01□□□□□ -0.33
TMED1-204ENST00000588289 RAB6BQ9NRW1 208 aa13.01□□□□□ -0.33
TMED1-204ENST00000588289 GRHL1Q9NZI5 618 aa13.01□□□□□ -0.33
TMED1-204ENST00000588289 TBC1D14Q9P2M4 693 aa13.01□□□□□ -0.33
TMED1-204ENST00000588289 NEU2Q9Y3R4 380 aa13.01□□□□□ -0.33
TMED1-204ENST00000588289 CPQQ9Y646 472 aa13.01□□□□□ -0.33
TMED1-204ENST00000588289 MIA3Q5JRA6 1907 aa13□□□□□ -0.33
TMED1-204ENST00000588289 E2F8A0AVK6 867 aa13□□□□□ -0.33
TMED1-204ENST00000588289 DRGXA6NNA5 263 aa13□□□□□ -0.33
TMED1-204ENST00000588289 GRXCR1A8MXD5 290 aa13□□□□□ -0.33
TMED1-204ENST00000588289 FAM72CH0Y354 149 aa13□□□□□ -0.33
TMED1-204ENST00000588289 IRF1P10914 325 aa13□□□□□ -0.33
TMED1-204ENST00000588289 TPSB2P20231 275 aa13□□□□□ -0.33
TMED1-204ENST00000588289 DNAJB1P25685 340 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms