RNA–Protein interactions for RNA: ENST00000588062.5

TRAPPC6A-204, Transcript of trafficking protein particle complex 6A, humanhuman

TSL 2 BASIC

Gene TRAPPC6A, Length 695 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6A-204ENST00000588062 APOEP02649 317 aa16.06■□□□□ 0.16
TRAPPC6A-204ENST00000588062 IGHV4-34P06331 123 aa16.06■□□□□ 0.16
TRAPPC6A-204ENST00000588062 SRPRAP08240 638 aaKnown RBP16.06■□□□□ 0.16
TRAPPC6A-204ENST00000588062 CD27P26842 260 aa16.06■□□□□ 0.16
TRAPPC6A-204ENST00000588062 ST8SIA6P61647 398 aa16.06■□□□□ 0.16
TRAPPC6A-204ENST00000588062 CAMK4Q16566 473 aa16.06■□□□□ 0.16
TRAPPC6A-204ENST00000588062 ARHGAP44Q17R89 818 aa16.06■□□□□ 0.16
TRAPPC6A-204ENST00000588062 KCNT1Q5JUK3 1230 aa16.06■□□□□ 0.16
TRAPPC6A-204ENST00000588062 CHSY1Q86X52 802 aa16.06■□□□□ 0.16
TRAPPC6A-204ENST00000588062 DHX40Q8IX18 779 aaKnown RBP16.06■□□□□ 0.16
TRAPPC6A-204ENST00000588062 SHC3Q92529 594 aa16.06■□□□□ 0.16
TRAPPC6A-204ENST00000588062 FAM81BQ96LP2 452 aa16.06■□□□□ 0.16
TRAPPC6A-204ENST00000588062 CPXM1Q96SM3 734 aa16.06■□□□□ 0.16
TRAPPC6A-204ENST00000588062 FAM129BQ96TA1 746 aa16.06■□□□□ 0.16
TRAPPC6A-204ENST00000588062 PRMT1Q99873 361 aaKnown RBP16.06■□□□□ 0.16
TRAPPC6A-204ENST00000588062 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.06■□□□□ 0.16
TRAPPC6A-204ENST00000588062 FBXL12Q9NXK8 326 aa16.06■□□□□ 0.16
TRAPPC6A-204ENST00000588062 KIAA1522Q9P206 1035 aaPredicted RBP16.06■□□□□ 0.16
TRAPPC6A-204ENST00000588062 APEX2Q9UBZ4 518 aa16.06■□□□□ 0.16
TRAPPC6A-204ENST00000588062 SCML1Q9UN30 329 aa16.06■□□□□ 0.16
TRAPPC6A-204ENST00000588062 ANKRD6Q9Y2G4 727 aa16.06■□□□□ 0.16
TRAPPC6A-204ENST00000588062 PCDHGB2Q9Y5G2 931 aa16.06■□□□□ 0.16
TRAPPC6A-204ENST00000588062 SNX11Q9Y5W9 270 aa16.06■□□□□ 0.16
TRAPPC6A-204ENST00000588062 WDFY3Q8IZQ1 3526 aa16.06■□□□□ 0.16
TRAPPC6A-204ENST00000588062 PTPRBP23467 1997 aa16.06■□□□□ 0.16
TRAPPC6A-204ENST00000588062 NBEAQ8NFP9 2946 aa16.05■□□□□ 0.16
TRAPPC6A-204ENST00000588062 TARSL2A2RTX5 802 aaKnown RBP16.05■□□□□ 0.16
TRAPPC6A-204ENST00000588062 SRRM3A6NNA2 597 aaPredicted RBP16.05■□□□□ 0.16
TRAPPC6A-204ENST00000588062 FSBPO95073 299 aa16.05■□□□□ 0.16
TRAPPC6A-204ENST00000588062 PON1P27169 355 aa16.05■□□□□ 0.16
TRAPPC6A-204ENST00000588062 GRIA4P48058 902 aa16.05■□□□□ 0.16
TRAPPC6A-204ENST00000588062 GALCP54803 685 aa16.05■□□□□ 0.16
TRAPPC6A-204ENST00000588062 ECT2LQ008S8 904 aa16.05■□□□□ 0.16
TRAPPC6A-204ENST00000588062 CST6Q15828 149 aa16.05■□□□□ 0.16
TRAPPC6A-204ENST00000588062 LAYNQ6UX15 382 aa16.05■□□□□ 0.16
TRAPPC6A-204ENST00000588062 GBP6Q6ZN66 633 aa16.05■□□□□ 0.16
TRAPPC6A-204ENST00000588062 CCDC117Q8IWD4 279 aaPredicted RBP16.05■□□□□ 0.16
TRAPPC6A-204ENST00000588062 DEFB106AQ8N104 65 aa16.05■□□□□ 0.16
TRAPPC6A-204ENST00000588062 PNPLA1Q8N8W4 532 aa16.05■□□□□ 0.16
TRAPPC6A-204ENST00000588062 SETD7Q8WTS6 366 aaKnown RBP16.05■□□□□ 0.16
TRAPPC6A-204ENST00000588062 SLC2A13Q96QE2 648 aa16.05■□□□□ 0.16
TRAPPC6A-204ENST00000588062 SIX2Q9NPC8 291 aa16.05■□□□□ 0.16
TRAPPC6A-204ENST00000588062 AJAP1Q9UKB5 411 aaPredicted RBP16.05■□□□□ 0.16
TRAPPC6A-204ENST00000588062 RALYQ9UKM9 306 aaKnown RBP16.05■□□□□ 0.16
TRAPPC6A-204ENST00000588062 PCDHGC3Q9UN70 934 aa16.05■□□□□ 0.16
TRAPPC6A-204ENST00000588062 PLXNA2O75051 1894 aa16.05■□□□□ 0.16
TRAPPC6A-204ENST00000588062 GTPBP10A4D1E9 387 aaKnown RBP16.04■□□□□ 0.16
TRAPPC6A-204ENST00000588062 KCNK3O14649 394 aa16.04■□□□□ 0.16
TRAPPC6A-204ENST00000588062 MID1O15344 667 aa16.04■□□□□ 0.16
TRAPPC6A-204ENST00000588062 DKK1O94907 266 aa16.04■□□□□ 0.16
TRAPPC6A-204ENST00000588062 MOCS3O95396 460 aa16.04■□□□□ 0.16
TRAPPC6A-204ENST00000588062 GLI1P08151 1106 aa16.04■□□□□ 0.16
TRAPPC6A-204ENST00000588062 USP8P40818 1118 aa16.04■□□□□ 0.16
TRAPPC6A-204ENST00000588062 TEAD4Q15561 434 aa16.04■□□□□ 0.16
TRAPPC6A-204ENST00000588062 EXOC3L4Q17RC7 722 aa16.04■□□□□ 0.16
TRAPPC6A-204ENST00000588062 KIAA0895LQ68EN5 471 aa16.04■□□□□ 0.16
TRAPPC6A-204ENST00000588062 SMYD5Q6GMV2 418 aa16.04■□□□□ 0.16
TRAPPC6A-204ENST00000588062 DPY19L2P1Q6NXN4 242 aa16.04■□□□□ 0.16
TRAPPC6A-204ENST00000588062 CREBRFQ8IUR6 639 aa16.04■□□□□ 0.16
TRAPPC6A-204ENST00000588062 MMAAQ8IVH4 418 aaKnown RBP16.04■□□□□ 0.16
TRAPPC6A-204ENST00000588062 ATP6V0D2Q8N8Y2 350 aa16.04■□□□□ 0.16
TRAPPC6A-204ENST00000588062 ZCCHC14Q8WYQ9 949 aaKnown RBP16.04■□□□□ 0.16
TRAPPC6A-204ENST00000588062 PTPRN2Q92932 1015 aa16.04■□□□□ 0.16
TRAPPC6A-204ENST00000588062 RPL10LQ96L21 214 aaKnown RBP16.04■□□□□ 0.16
TRAPPC6A-204ENST00000588062 NEUROG2Q9H2A3 272 aa16.04■□□□□ 0.16
TRAPPC6A-204ENST00000588062 EBF2Q9HAK2 575 aa16.04■□□□□ 0.16
TRAPPC6A-204ENST00000588062 ASNSD1Q9NWL6 643 aa16.04■□□□□ 0.16
TRAPPC6A-204ENST00000588062 TOR4AQ9NXH8 423 aa16.04■□□□□ 0.16
TRAPPC6A-204ENST00000588062 ADAMTS1Q9UHI8 967 aa16.04■□□□□ 0.16
TRAPPC6A-204ENST00000588062 NCKAP1Q9Y2A7 1128 aa16.04■□□□□ 0.16
TRAPPC6A-204ENST00000588062 BTBD3Q9Y2F9 522 aa16.04■□□□□ 0.16
TRAPPC6A-204ENST00000588062 ATRXP46100 2492 aa16.04■□□□□ 0.16
TRAPPC6A-204ENST00000588062 EDDM13A0A1B0GTR0 161 aa16.03■□□□□ 0.16
TRAPPC6A-204ENST00000588062 A0A1W2PP55 124 aa16.03■□□□□ 0.16
TRAPPC6A-204ENST00000588062 F5H5T6 163 aa16.03■□□□□ 0.16
TRAPPC6A-204ENST00000588062 TAF4O00268 1085 aa16.03■□□□□ 0.16
TRAPPC6A-204ENST00000588062 FLRT2O43155 660 aa16.03■□□□□ 0.16
TRAPPC6A-204ENST00000588062 RNASEH1O60930 286 aaKnown RBP16.03■□□□□ 0.16
TRAPPC6A-204ENST00000588062 MZF1P28698 734 aaPredicted RBP16.03■□□□□ 0.16
TRAPPC6A-204ENST00000588062 SLC8A1P32418 973 aa16.03■□□□□ 0.16
TRAPPC6A-204ENST00000588062 CLCN1P35523 988 aa16.03■□□□□ 0.16
TRAPPC6A-204ENST00000588062 CTSKP43235 329 aa16.03■□□□□ 0.16
TRAPPC6A-204ENST00000588062 STK19P49842 368 aaPredicted RBP16.03■□□□□ 0.16
TRAPPC6A-204ENST00000588062 PLK1P53350 603 aa16.03■□□□□ 0.16
TRAPPC6A-204ENST00000588062 UBE2HP62256 183 aa16.03■□□□□ 0.16
TRAPPC6A-204ENST00000588062 CDK17Q00537 523 aa16.03■□□□□ 0.16
TRAPPC6A-204ENST00000588062 SLC12A1Q13621 1099 aa16.03■□□□□ 0.16
TRAPPC6A-204ENST00000588062 KCNJ12Q14500 433 aa16.03■□□□□ 0.16
TRAPPC6A-204ENST00000588062 EFHC1Q5JVL4 640 aa16.03■□□□□ 0.16
TRAPPC6A-204ENST00000588062 FBXL22Q6P050 247 aa16.03■□□□□ 0.16
TRAPPC6A-204ENST00000588062 NCEH1Q6PIU2 408 aa16.03■□□□□ 0.16
TRAPPC6A-204ENST00000588062 CIR1Q86X95 450 aaPredicted RBP16.03■□□□□ 0.16
TRAPPC6A-204ENST00000588062 CCAR2Q8N163 923 aaKnown RBP16.03■□□□□ 0.16
TRAPPC6A-204ENST00000588062 AADATQ8N5Z0 425 aa16.03■□□□□ 0.16
TRAPPC6A-204ENST00000588062 RHBDD1Q8TEB9 315 aa16.03■□□□□ 0.16
TRAPPC6A-204ENST00000588062 GANCQ8TET4 914 aa16.03■□□□□ 0.16
TRAPPC6A-204ENST00000588062 IGSF8Q969P0 613 aa16.03■□□□□ 0.16
TRAPPC6A-204ENST00000588062 ALG14Q96F25 216 aa16.03■□□□□ 0.16
TRAPPC6A-204ENST00000588062 PPP1R13BQ96KQ4 1090 aa16.03■□□□□ 0.16
TRAPPC6A-204ENST00000588062 APOBEC2Q9Y235 224 aaKnown RBP16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms