RNA–Protein interactions for RNA: ENST00000588032.5

TPM4-207, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 712 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-207ENST00000588032 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.42□□□□□ -0.74
TPM4-207ENST00000588032 OSBPL2Q9H1P3 480 aa10.42□□□□□ -0.74
TPM4-207ENST00000588032 TMEM245Q9H330 911 aa10.42□□□□□ -0.74
TPM4-207ENST00000588032 FBRSQ9HAH7 460 aa10.42□□□□□ -0.74
TPM4-207ENST00000588032 CD248Q9HCU0 757 aa10.42□□□□□ -0.74
TPM4-207ENST00000588032 ZDHHC4Q9NPG8 344 aa10.42□□□□□ -0.74
TPM4-207ENST00000588032 ZNHIT6Q9NWK9 470 aaKnown RBP10.42□□□□□ -0.74
TPM4-207ENST00000588032 CACNA2D2Q9NY47 1150 aa10.42□□□□□ -0.74
TPM4-207ENST00000588032 TAS2R14Q9NYV8 317 aa10.42□□□□□ -0.74
TPM4-207ENST00000588032 PPARGC1AQ9UBK2 798 aaKnown RBP10.42□□□□□ -0.74
TPM4-207ENST00000588032 SUN2Q9UH99 717 aa10.42□□□□□ -0.74
TPM4-207ENST00000588032 GMEB2Q9UKD1 530 aa10.42□□□□□ -0.74
TPM4-207ENST00000588032 SMG5Q9UPR3 1016 aaKnown RBP10.42□□□□□ -0.74
TPM4-207ENST00000588032 TBC1D30Q9Y2I9 924 aa10.42□□□□□ -0.74
TPM4-207ENST00000588032 SCINQ9Y6U3 715 aa10.42□□□□□ -0.74
TPM4-207ENST00000588032 WASH3PC4AMC7 463 aa10.41□□□□□ -0.74
TPM4-207ENST00000588032 E9PAM4 449 aa10.41□□□□□ -0.74
TPM4-207ENST00000588032 I6L893 689 aaPredicted RBP10.41□□□□□ -0.74
TPM4-207ENST00000588032 RHOBTB1O94844 696 aa10.41□□□□□ -0.74
TPM4-207ENST00000588032 GABRG2P18507 467 aa10.41□□□□□ -0.74
TPM4-207ENST00000588032 NNMTP40261 264 aa10.41□□□□□ -0.74
TPM4-207ENST00000588032 CSKP41240 450 aa10.41□□□□□ -0.74
TPM4-207ENST00000588032 VASPP50552 380 aaPredicted RBP10.41□□□□□ -0.74
TPM4-207ENST00000588032 ATXN1P54253 815 aaKnown RBP10.41□□□□□ -0.74
TPM4-207ENST00000588032 HDAC4P56524 1084 aa10.41□□□□□ -0.74
TPM4-207ENST00000588032 RPL7AP62424 266 aaKnown RBP10.41□□□□□ -0.74
TPM4-207ENST00000588032 ARID5BQ14865 1188 aa10.41□□□□□ -0.74
TPM4-207ENST00000588032 ELF2Q15723 593 aa10.41□□□□□ -0.74
TPM4-207ENST00000588032 PTPRNQ16849 979 aa10.41□□□□□ -0.74
TPM4-207ENST00000588032 C15orf59Q2T9L4 293 aaPredicted RBP10.41□□□□□ -0.74
TPM4-207ENST00000588032 PLEKHG6Q3KR16 790 aa10.41□□□□□ -0.74
TPM4-207ENST00000588032 FUT11Q495W5 492 aa10.41□□□□□ -0.74
TPM4-207ENST00000588032 FNDC3BQ53EP0 1204 aaKnown RBP10.41□□□□□ -0.74
TPM4-207ENST00000588032 FSCBQ5H9T9 825 aa10.41□□□□□ -0.74
TPM4-207ENST00000588032 PITRM1Q5JRX3 1037 aa10.41□□□□□ -0.74
TPM4-207ENST00000588032 SLFN11Q7Z7L1 901 aa10.41□□□□□ -0.74
TPM4-207ENST00000588032 METTL3Q86U44 580 aaKnown RBP10.41□□□□□ -0.74
TPM4-207ENST00000588032 ZNF683Q8IZ20 524 aa10.41□□□□□ -0.74
TPM4-207ENST00000588032 FNIP1Q8TF40 1166 aa10.41□□□□□ -0.74
TPM4-207ENST00000588032 HMGB4Q8WW32 186 aa10.41□□□□□ -0.74
TPM4-207ENST00000588032 SORCS1Q8WY21 1168 aa10.41□□□□□ -0.74
TPM4-207ENST00000588032 SPACA7Q96KW9 195 aa10.41□□□□□ -0.74
TPM4-207ENST00000588032 DNAJC7Q99615 494 aa10.41□□□□□ -0.74
TPM4-207ENST00000588032 TRIM5Q9C035 493 aa10.41□□□□□ -0.74
TPM4-207ENST00000588032 ANLNQ9NQW6 1124 aa10.41□□□□□ -0.74
TPM4-207ENST00000588032 NCDNQ9UBB6 729 aa10.41□□□□□ -0.74
TPM4-207ENST00000588032 CNOT8Q9UFF9 292 aaKnown RBP10.41□□□□□ -0.74
TPM4-207ENST00000588032 OR12D3Q9UGF7 316 aa10.41□□□□□ -0.74
TPM4-207ENST00000588032 INTS6Q9UL03 887 aaKnown RBP10.41□□□□□ -0.74
TPM4-207ENST00000588032 FANCMQ8IYD8 2048 aa10.41□□□□□ -0.74
TPM4-207ENST00000588032 SSU72P8A0A1W2PR75 194 aa10.4□□□□□ -0.74
TPM4-207ENST00000588032 TMEM191CA6NGB0 347 aa10.4□□□□□ -0.74
TPM4-207ENST00000588032 SRGAP2O75044 1071 aa10.4□□□□□ -0.74
TPM4-207ENST00000588032 LRP3O75074 770 aa10.4□□□□□ -0.74
TPM4-207ENST00000588032 RNF8O76064 485 aa10.4□□□□□ -0.74
TPM4-207ENST00000588032 GJB6O95452 261 aa10.4□□□□□ -0.74
TPM4-207ENST00000588032 EPHX1P07099 455 aa10.4□□□□□ -0.74
TPM4-207ENST00000588032 RETP07949 1114 aa10.4□□□□□ -0.74
TPM4-207ENST00000588032 C7P10643 843 aa10.4□□□□□ -0.74
TPM4-207ENST00000588032 HOXC13P31276 330 aa10.4□□□□□ -0.74
TPM4-207ENST00000588032 P2RY2P41231 377 aa10.4□□□□□ -0.74
TPM4-207ENST00000588032 ECT2LQ008S8 904 aa10.4□□□□□ -0.74
TPM4-207ENST00000588032 SCAPQ12770 1279 aa10.4□□□□□ -0.74
TPM4-207ENST00000588032 SRSF5Q13243 272 aaKnown RBP10.4□□□□□ -0.74
TPM4-207ENST00000588032 CAMK2GQ13555 558 aaPredicted RBP10.4□□□□□ -0.74
TPM4-207ENST00000588032 ACAP1Q15027 740 aa10.4□□□□□ -0.74
TPM4-207ENST00000588032 SPDYCQ5MJ68 293 aa10.4□□□□□ -0.74
TPM4-207ENST00000588032 C6orf118Q5T5N4 469 aa10.4□□□□□ -0.74
TPM4-207ENST00000588032 SH3PXD2AQ5TCZ1 1133 aa10.4□□□□□ -0.74
TPM4-207ENST00000588032 RNF219Q5W0B1 726 aaPredicted RBP10.4□□□□□ -0.74
TPM4-207ENST00000588032 CXorf57Q6NSI4 855 aaKnown RBP10.4□□□□□ -0.74
TPM4-207ENST00000588032 KIAA1211LQ6NV74 962 aa10.4□□□□□ -0.74
TPM4-207ENST00000588032 ALKBH5Q6P6C2 394 aaKnown RBP10.4□□□□□ -0.74
TPM4-207ENST00000588032 SLC36A4Q6YBV0 504 aa10.4□□□□□ -0.74
TPM4-207ENST00000588032 ZNF783Q6ZMS7 281 aa10.4□□□□□ -0.74
TPM4-207ENST00000588032 TMC6Q7Z403 805 aa10.4□□□□□ -0.74
TPM4-207ENST00000588032 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.4□□□□□ -0.74
TPM4-207ENST00000588032 C14orf80Q86SX3 495 aa10.4□□□□□ -0.74
TPM4-207ENST00000588032 CNGA4Q8IV77 575 aa10.4□□□□□ -0.74
TPM4-207ENST00000588032 FAM160A2Q8N612 972 aaPredicted RBP10.4□□□□□ -0.74
TPM4-207ENST00000588032 CYB5D2Q8WUJ1 264 aa10.4□□□□□ -0.74
TPM4-207ENST00000588032 PRCCQ92733 491 aaPredicted RBP10.4□□□□□ -0.74
TPM4-207ENST00000588032 ZNF653Q96CK0 615 aa10.4□□□□□ -0.74
TPM4-207ENST00000588032 MRGPRX1Q96LB2 322 aa10.4□□□□□ -0.74
TPM4-207ENST00000588032 FEM1AQ9BSK4 669 aa10.4□□□□□ -0.74
TPM4-207ENST00000588032 TPSD1Q9BZJ3 242 aa10.4□□□□□ -0.74
TPM4-207ENST00000588032 ZYG11BQ9C0D3 744 aa10.4□□□□□ -0.74
TPM4-207ENST00000588032 ARHGAP20Q9P2F6 1191 aa10.4□□□□□ -0.74
TPM4-207ENST00000588032 ERVW-1Q9UQF0 538 aa10.4□□□□□ -0.74
TPM4-207ENST00000588032 PCDHGA5Q9Y5G8 931 aa10.4□□□□□ -0.74
TPM4-207ENST00000588032 RAD54BQ9Y620 910 aa10.4□□□□□ -0.74
TPM4-207ENST00000588032 CACNA1HO95180 2353 aa10.39□□□□□ -0.75
TPM4-207ENST00000588032 ATG2BQ96BY7 2078 aa10.39□□□□□ -0.75
TPM4-207ENST00000588032 A0A087X0T9 212 aa10.39□□□□□ -0.75
TPM4-207ENST00000588032 CXorf51AA0A1B0GTR3 108 aa10.39□□□□□ -0.75
TPM4-207ENST00000588032 ILVBLA1L0T0 632 aa10.39□□□□□ -0.75
TPM4-207ENST00000588032 TARSL2A2RTX5 802 aaKnown RBP10.39□□□□□ -0.75
TPM4-207ENST00000588032 EIF3CLB5ME19 914 aaKnown RBP10.39□□□□□ -0.75
TPM4-207ENST00000588032 MAP3K13O43283 966 aa10.39□□□□□ -0.75
TPM4-207ENST00000588032 CCP110O43303 1012 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms