RNA–Protein interactions for RNA: ENST00000587945.1

VMP1-206, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-206ENST00000587945 SGK2Q9HBY8 427 aa14.82□□□□□ -0.04
VMP1-206ENST00000587945 TM7SF3Q9NS93 570 aa14.82□□□□□ -0.04
VMP1-206ENST00000587945 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.82□□□□□ -0.04
VMP1-206ENST00000587945 FBXL12Q9NXK8 326 aa14.82□□□□□ -0.04
VMP1-206ENST00000587945 SLC12A6Q9UHW9 1150 aa14.82□□□□□ -0.04
VMP1-206ENST00000587945 ZMIZ1Q9ULJ6 1067 aa14.82□□□□□ -0.04
VMP1-206ENST00000587945 PCDHGC3Q9UN70 934 aa14.82□□□□□ -0.04
VMP1-206ENST00000587945 ASPMQ8IZT6 3477 aa14.82□□□□□ -0.04
VMP1-206ENST00000587945 A0A1W2PP55 124 aa14.81□□□□□ -0.04
VMP1-206ENST00000587945 KCNK3O14649 394 aa14.81□□□□□ -0.04
VMP1-206ENST00000587945 RNASEH1O60930 286 aaKnown RBP14.81□□□□□ -0.04
VMP1-206ENST00000587945 MOCS3O95396 460 aa14.81□□□□□ -0.04
VMP1-206ENST00000587945 CER1O95813 267 aa14.81□□□□□ -0.04
VMP1-206ENST00000587945 GLI1P08151 1106 aa14.81□□□□□ -0.04
VMP1-206ENST00000587945 PDGFRAP16234 1089 aa14.81□□□□□ -0.04
VMP1-206ENST00000587945 MZF1P28698 734 aaPredicted RBP14.81□□□□□ -0.04
VMP1-206ENST00000587945 CLCN1P35523 988 aa14.81□□□□□ -0.04
VMP1-206ENST00000587945 GGCXP38435 758 aa14.81□□□□□ -0.04
VMP1-206ENST00000587945 AFF3P51826 1226 aaKnown RBP14.81□□□□□ -0.04
VMP1-206ENST00000587945 CENPCQ03188 943 aa14.81□□□□□ -0.04
VMP1-206ENST00000587945 PTK2Q05397 1052 aa14.81□□□□□ -0.04
VMP1-206ENST00000587945 NME3Q13232 169 aa14.81□□□□□ -0.04
VMP1-206ENST00000587945 HNRNPDQ14103 355 aaKnown RBP14.81□□□□□ -0.04
VMP1-206ENST00000587945 CST6Q15828 149 aa14.81□□□□□ -0.04
VMP1-206ENST00000587945 MAN2A1Q16706 1144 aa14.81□□□□□ -0.04
VMP1-206ENST00000587945 DPCR1Q3MIW9 517 aa14.81□□□□□ -0.04
VMP1-206ENST00000587945 PTPN20Q4JDL3 420 aa14.81□□□□□ -0.04
VMP1-206ENST00000587945 KCNT1Q5JUK3 1230 aa14.81□□□□□ -0.04
VMP1-206ENST00000587945 RNF219Q5W0B1 726 aaPredicted RBP14.81□□□□□ -0.04
VMP1-206ENST00000587945 FBXL22Q6P050 247 aa14.81□□□□□ -0.04
VMP1-206ENST00000587945 IL27RAQ6UWB1 636 aa14.81□□□□□ -0.04
VMP1-206ENST00000587945 C11orf57Q6ZUT1 292 aaPredicted RBP14.81□□□□□ -0.04
VMP1-206ENST00000587945 CCAR2Q8N163 923 aaKnown RBP14.81□□□□□ -0.04
VMP1-206ENST00000587945 STK40Q8N2I9 435 aa14.81□□□□□ -0.04
VMP1-206ENST00000587945 FAM129BQ96TA1 746 aa14.81□□□□□ -0.04
VMP1-206ENST00000587945 ORAI3Q9BRQ5 295 aa14.81□□□□□ -0.04
VMP1-206ENST00000587945 NEUROG2Q9H2A3 272 aa14.81□□□□□ -0.04
VMP1-206ENST00000587945 CLSTN2Q9H4D0 955 aa14.81□□□□□ -0.04
VMP1-206ENST00000587945 CHMP5Q9NZZ3 219 aa14.81□□□□□ -0.04
VMP1-206ENST00000587945 NCKAP1Q9Y2A7 1128 aa14.81□□□□□ -0.04
VMP1-206ENST00000587945 NEUROG3Q9Y4Z2 214 aa14.81□□□□□ -0.04
VMP1-206ENST00000587945 SNX11Q9Y5W9 270 aa14.81□□□□□ -0.04
VMP1-206ENST00000587945 ADAMTS9Q9P2N4 1935 aa14.8□□□□□ -0.04
VMP1-206ENST00000587945 HSF2BPO75031 334 aa14.8□□□□□ -0.04
VMP1-206ENST00000587945 CBFA2T3O75081 653 aa14.8□□□□□ -0.04
VMP1-206ENST00000587945 IGHV4-34P06331 123 aa14.8□□□□□ -0.04
VMP1-206ENST00000587945 SRPRAP08240 638 aaKnown RBP14.8□□□□□ -0.04
VMP1-206ENST00000587945 FTH1P19P0C7X4 201 aa14.8□□□□□ -0.04
VMP1-206ENST00000587945 PRKCSHP14314 528 aaPredicted RBP14.8□□□□□ -0.04
VMP1-206ENST00000587945 VAV1P15498 845 aa14.8□□□□□ -0.04
VMP1-206ENST00000587945 ABCB4P21439 1286 aa14.8□□□□□ -0.04
VMP1-206ENST00000587945 CD27P26842 260 aa14.8□□□□□ -0.04
VMP1-206ENST00000587945 CCR1P32246 355 aa14.8□□□□□ -0.04
VMP1-206ENST00000587945 SLC8A1P32418 973 aa14.8□□□□□ -0.04
VMP1-206ENST00000587945 KRT9P35527 623 aa14.8□□□□□ -0.04
VMP1-206ENST00000587945 PSMD8P48556 350 aa14.8□□□□□ -0.04
VMP1-206ENST00000587945 IRAK1P51617 712 aa14.8□□□□□ -0.04
VMP1-206ENST00000587945 GALCP54803 685 aa14.8□□□□□ -0.04
VMP1-206ENST00000587945 ARID5BQ14865 1188 aa14.8□□□□□ -0.04
VMP1-206ENST00000587945 VWA3BQ502W6 1294 aa14.8□□□□□ -0.04
VMP1-206ENST00000587945 EFHC1Q5JVL4 640 aa14.8□□□□□ -0.04
VMP1-206ENST00000587945 KIAA0895LQ68EN5 471 aa14.8□□□□□ -0.04
VMP1-206ENST00000587945 DPY19L2P1Q6NXN4 242 aa14.8□□□□□ -0.04
VMP1-206ENST00000587945 NCEH1Q6PIU2 408 aa14.8□□□□□ -0.04
VMP1-206ENST00000587945 OLFML1Q6UWY5 402 aa14.8□□□□□ -0.04
VMP1-206ENST00000587945 RAB44Q7Z6P3 723 aaPredicted RBP14.8□□□□□ -0.04
VMP1-206ENST00000587945 C14orf80Q86SX3 495 aa14.8□□□□□ -0.04
VMP1-206ENST00000587945 KDF1Q8NAX2 398 aaPredicted RBP14.8□□□□□ -0.04
VMP1-206ENST00000587945 KDM1BQ8NB78 822 aa14.8□□□□□ -0.04
VMP1-206ENST00000587945 IGSF8Q969P0 613 aa14.8□□□□□ -0.04
VMP1-206ENST00000587945 NDST4Q9H3R1 872 aa14.8□□□□□ -0.04
VMP1-206ENST00000587945 ASNSD1Q9NWL6 643 aa14.8□□□□□ -0.04
VMP1-206ENST00000587945 PCOLCE2Q9UKZ9 415 aa14.8□□□□□ -0.04
VMP1-206ENST00000587945 ANKRD6Q9Y2G4 727 aa14.8□□□□□ -0.04
VMP1-206ENST00000587945 MSRB2Q9Y3D2 182 aa14.8□□□□□ -0.04
VMP1-206ENST00000587945 MUC22E2RYF6 1773 aaPredicted RBP14.8□□□□□ -0.04
VMP1-206ENST00000587945 CKAP5Q14008 2032 aa14.8□□□□□ -0.04
VMP1-206ENST00000587945 EDDM13A0A1B0GTR0 161 aa14.79□□□□□ -0.04
VMP1-206ENST00000587945 TARSL2A2RTX5 802 aaKnown RBP14.79□□□□□ -0.04
VMP1-206ENST00000587945 PCNX2A6NKB5 2137 aa14.79□□□□□ -0.04
VMP1-206ENST00000587945 RNASEH2AO75792 299 aaKnown RBP14.79□□□□□ -0.04
VMP1-206ENST00000587945 TRIM16O95361 564 aa14.79□□□□□ -0.04
VMP1-206ENST00000587945 SLC2A3P11169 496 aa14.79□□□□□ -0.04
VMP1-206ENST00000587945 RDXP35241 583 aaKnown RBP14.79□□□□□ -0.04
VMP1-206ENST00000587945 SLC6A3Q01959 620 aa14.79□□□□□ -0.04
VMP1-206ENST00000587945 AUHQ13825 339 aaKnown RBP14.79□□□□□ -0.04
VMP1-206ENST00000587945 TEAD4Q15561 434 aa14.79□□□□□ -0.04
VMP1-206ENST00000587945 ZNF423Q2M1K9 1284 aa14.79□□□□□ -0.04
VMP1-206ENST00000587945 MIIPQ5JXC2 388 aa14.79□□□□□ -0.04
VMP1-206ENST00000587945 CXorf57Q6NSI4 855 aaKnown RBP14.79□□□□□ -0.04
VMP1-206ENST00000587945 USP30Q70CQ3 517 aa14.79□□□□□ -0.04
VMP1-206ENST00000587945 SLCO6A1Q86UG4 719 aa14.79□□□□□ -0.04
VMP1-206ENST00000587945 FAM71AQ8IYT1 594 aa14.79□□□□□ -0.04
VMP1-206ENST00000587945 AADATQ8N5Z0 425 aa14.79□□□□□ -0.04
VMP1-206ENST00000587945 OR52K2Q8NGK3 314 aa14.79□□□□□ -0.04
VMP1-206ENST00000587945 PTPRN2Q92932 1015 aa14.79□□□□□ -0.04
VMP1-206ENST00000587945 SLC6A18Q96N87 628 aa14.79□□□□□ -0.04
VMP1-206ENST00000587945 RPRD1AQ96P16 312 aaPredicted RBP14.79□□□□□ -0.04
VMP1-206ENST00000587945 NOX5Q96PH1 765 aa14.79□□□□□ -0.04
VMP1-206ENST00000587945 OMDQ99983 421 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms