RNA–Protein interactions for RNA: ENST00000586921.1

SMARCA4-211, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 5

Gene SMARCA4, Length 569 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-211ENST00000586921 A0A1W2PQH9 124 aa13.2□□□□□ -0.3
SMARCA4-211ENST00000586921 TNNC2P02585 160 aa13.2□□□□□ -0.3
SMARCA4-211ENST00000586921 TPM2P07951 284 aa13.2□□□□□ -0.3
SMARCA4-211ENST00000586921 JMJD7P0C870 316 aa13.2□□□□□ -0.3
SMARCA4-211ENST00000586921 HGFP14210 728 aa13.2□□□□□ -0.3
SMARCA4-211ENST00000586921 POLR2EP19388 210 aaKnown RBP13.2□□□□□ -0.3
SMARCA4-211ENST00000586921 ST8SIA6P61647 398 aa13.2□□□□□ -0.3
SMARCA4-211ENST00000586921 COG7P83436 770 aa13.2□□□□□ -0.3
SMARCA4-211ENST00000586921 HNRNPA1L2Q32P51 320 aaKnown RBP13.2□□□□□ -0.3
SMARCA4-211ENST00000586921 SETMARQ53H47 684 aaPredicted RBP13.2□□□□□ -0.3
SMARCA4-211ENST00000586921 HYIQ5T013 277 aa13.2□□□□□ -0.3
SMARCA4-211ENST00000586921 RSRC2Q7L4I2 434 aaKnown RBP13.2□□□□□ -0.3
SMARCA4-211ENST00000586921 DYMQ7RTS9 669 aa13.2□□□□□ -0.3
SMARCA4-211ENST00000586921 ZFAND4Q86XD8 727 aa13.2□□□□□ -0.3
SMARCA4-211ENST00000586921 NMUR1Q9HB89 426 aa13.2□□□□□ -0.3
SMARCA4-211ENST00000586921 PISDQ9UG56 409 aa13.2□□□□□ -0.3
SMARCA4-211ENST00000586921 SCML2Q9UQR0 700 aa13.2□□□□□ -0.3
SMARCA4-211ENST00000586921 DOCK9Q9BZ29 2069 aa13.2□□□□□ -0.3
SMARCA4-211ENST00000586921 PRAMEF33A0A0G2JMD5 474 aa13.19□□□□□ -0.3
SMARCA4-211ENST00000586921 EME2A4GXA9 379 aaPredicted RBP13.19□□□□□ -0.3
SMARCA4-211ENST00000586921 MUSKO15146 869 aa13.19□□□□□ -0.3
SMARCA4-211ENST00000586921 PRAMEF10O60809 474 aa13.19□□□□□ -0.3
SMARCA4-211ENST00000586921 TBCAO75347 108 aaKnown RBP13.19□□□□□ -0.3
SMARCA4-211ENST00000586921 PRPF6O94906 941 aaKnown RBP13.19□□□□□ -0.3
SMARCA4-211ENST00000586921 DDAH2O95865 285 aa13.19□□□□□ -0.3
SMARCA4-211ENST00000586921 LDHAP00338 332 aaKnown RBP13.19□□□□□ -0.3
SMARCA4-211ENST00000586921 PRKCGP05129 697 aa13.19□□□□□ -0.3
SMARCA4-211ENST00000586921 KRT18P05783 430 aaKnown RBP13.19□□□□□ -0.3
SMARCA4-211ENST00000586921 C5AR1P21730 350 aa13.19□□□□□ -0.3
SMARCA4-211ENST00000586921 DDIT3P35638 169 aa13.19□□□□□ -0.3
SMARCA4-211ENST00000586921 TNNC1P63316 161 aa13.19□□□□□ -0.3
SMARCA4-211ENST00000586921 GUCY1B3Q02153 619 aa13.19□□□□□ -0.3
SMARCA4-211ENST00000586921 NR0B2Q15466 257 aa13.19□□□□□ -0.3
SMARCA4-211ENST00000586921 MPPE1Q53F39 396 aa13.19□□□□□ -0.3
SMARCA4-211ENST00000586921 LACTB2Q53H82 288 aaPredicted RBP13.19□□□□□ -0.3
SMARCA4-211ENST00000586921 PERM1Q5SV97 790 aa13.19□□□□□ -0.3
SMARCA4-211ENST00000586921 PAQR9Q6ZVX9 377 aa13.19□□□□□ -0.3
SMARCA4-211ENST00000586921 HEATR4Q86WZ0 1026 aa13.19□□□□□ -0.3
SMARCA4-211ENST00000586921 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.19□□□□□ -0.3
SMARCA4-211ENST00000586921 ZMIZ2Q8NF64 920 aa13.19□□□□□ -0.3
SMARCA4-211ENST00000586921 OR5B17Q8NGF7 314 aa13.19□□□□□ -0.3
SMARCA4-211ENST00000586921 SMOQ99835 787 aa13.19□□□□□ -0.3
SMARCA4-211ENST00000586921 CALN1Q9BXU9 219 aa13.19□□□□□ -0.3
SMARCA4-211ENST00000586921 STRADBQ9C0K7 418 aa13.19□□□□□ -0.3
SMARCA4-211ENST00000586921 INTS13Q9NVM9 706 aa13.19□□□□□ -0.3
SMARCA4-211ENST00000586921 DKK3Q9UBP4 350 aa13.19□□□□□ -0.3
SMARCA4-211ENST00000586921 RASAL2Q9UJF2 1139 aa13.19□□□□□ -0.3
SMARCA4-211ENST00000586921 NAGPAQ9UK23 515 aa13.19□□□□□ -0.3
SMARCA4-211ENST00000586921 ESPL1Q14674 2120 aa13.19□□□□□ -0.3
SMARCA4-211ENST00000586921 APCP25054 2843 aa13.19□□□□□ -0.3
SMARCA4-211ENST00000586921 ABCA2Q9BZC7 2435 aa13.19□□□□□ -0.3
SMARCA4-211ENST00000586921 GOLGA8IPA6NC78 632 aa13.18□□□□□ -0.3
SMARCA4-211ENST00000586921 WIPF3A6NGB9 483 aa13.18□□□□□ -0.3
SMARCA4-211ENST00000586921 GOLGA8JA6NMD2 632 aa13.18□□□□□ -0.3
SMARCA4-211ENST00000586921 CASC3O15234 703 aaKnown RBP13.18□□□□□ -0.3
SMARCA4-211ENST00000586921 BEST1O76090 585 aa13.18□□□□□ -0.3
SMARCA4-211ENST00000586921 CLDN1O95832 211 aa13.18□□□□□ -0.3
SMARCA4-211ENST00000586921 ADH1BP00325 375 aa13.18□□□□□ -0.3
SMARCA4-211ENST00000586921 FAM163BP0C2L3 166 aa13.18□□□□□ -0.3
SMARCA4-211ENST00000586921 MAP3K7CLP57077 242 aa13.18□□□□□ -0.3
SMARCA4-211ENST00000586921 HNRNPKP61978 463 aaKnown RBP eCLIP13.18□□□□□ -0.3
SMARCA4-211ENST00000586921 KLRB1Q12918 225 aa13.18□□□□□ -0.3
SMARCA4-211ENST00000586921 DHX8Q14562 1220 aaKnown RBP13.18□□□□□ -0.3
SMARCA4-211ENST00000586921 DRAP1Q14919 205 aaPredicted RBP13.18□□□□□ -0.3
SMARCA4-211ENST00000586921 IL17AQ16552 155 aa13.18□□□□□ -0.3
SMARCA4-211ENST00000586921 C9orf64Q5T6V5 341 aa13.18□□□□□ -0.3
SMARCA4-211ENST00000586921 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.18□□□□□ -0.3
SMARCA4-211ENST00000586921 DTHD1Q6ZMT9 781 aa13.18□□□□□ -0.3
SMARCA4-211ENST00000586921 B3GNT8Q7Z7M8 397 aa13.18□□□□□ -0.3
SMARCA4-211ENST00000586921 TRIM69Q86WT6 500 aa13.18□□□□□ -0.3
SMARCA4-211ENST00000586921 TMEM145Q8NBT3 493 aa13.18□□□□□ -0.3
SMARCA4-211ENST00000586921 GALNT11Q8NCW6 608 aa13.18□□□□□ -0.3
SMARCA4-211ENST00000586921 ZNF548Q8NEK5 533 aaPredicted RBP13.18□□□□□ -0.3
SMARCA4-211ENST00000586921 MYOCQ99972 504 aa13.18□□□□□ -0.3
SMARCA4-211ENST00000586921 DNAJC28Q9NX36 388 aa13.18□□□□□ -0.3
SMARCA4-211ENST00000586921 NOL7Q9UMY1 257 aaKnown RBP13.18□□□□□ -0.3
SMARCA4-211ENST00000586921 HIVEP3Q5T1R4 2406 aa13.18□□□□□ -0.3
SMARCA4-211ENST00000586921 SPG11Q96JI7 2443 aa13.18□□□□□ -0.3
SMARCA4-211ENST00000586921 PRR19A6NJB7 356 aa13.17□□□□□ -0.3
SMARCA4-211ENST00000586921 TMX2-CTNND1H3BSU7 103 aa13.17□□□□□ -0.3
SMARCA4-211ENST00000586921 RALAP11233 206 aa13.17□□□□□ -0.3
SMARCA4-211ENST00000586921 EFEMP1Q12805 493 aa13.17□□□□□ -0.3
SMARCA4-211ENST00000586921 DUOXA2Q1HG44 320 aa13.17□□□□□ -0.3
SMARCA4-211ENST00000586921 WDR72Q3MJ13 1102 aa13.17□□□□□ -0.3
SMARCA4-211ENST00000586921 ZNF542PQ5EBM4 170 aa13.17□□□□□ -0.3
SMARCA4-211ENST00000586921 GPRIN1Q7Z2K8 1008 aa13.17□□□□□ -0.3
SMARCA4-211ENST00000586921 KIAA0907Q7Z7F0 614 aaPredicted RBP13.17□□□□□ -0.3
SMARCA4-211ENST00000586921 DTX1Q86Y01 620 aa13.17□□□□□ -0.3
SMARCA4-211ENST00000586921 FAM217AQ8IXS0 508 aa13.17□□□□□ -0.3
SMARCA4-211ENST00000586921 FUKQ8N0W3 1084 aa13.17□□□□□ -0.3
SMARCA4-211ENST00000586921 NAT6Q93015 286 aa13.17□□□□□ -0.3
SMARCA4-211ENST00000586921 IFT43Q96FT9 208 aa13.17□□□□□ -0.3
SMARCA4-211ENST00000586921 MYO19Q96H55 970 aa13.17□□□□□ -0.3
SMARCA4-211ENST00000586921 CDK5RAP1Q96SZ6 601 aaKnown RBP13.17□□□□□ -0.3
SMARCA4-211ENST00000586921 TM6SF1Q9BZW5 370 aa13.17□□□□□ -0.3
SMARCA4-211ENST00000586921 ST6GALNAC4Q9H4F1 302 aa13.17□□□□□ -0.3
SMARCA4-211ENST00000586921 FOXJ2Q9P0K8 574 aa13.17□□□□□ -0.3
SMARCA4-211ENST00000586921 SCN8AQ9UQD0 1980 aa13.17□□□□□ -0.3
SMARCA4-211ENST00000586921 A0A1W2PQ27 194 aa13.16□□□□□ -0.3
SMARCA4-211ENST00000586921 A0A1W2PQ64 194 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms