RNA–Protein interactions for RNA: ENST00000586486.1

PRKCSH-203, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 1 (best)

Gene PRKCSH, Length 1,613 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-203ENST00000586486 PCDH19Q8TAB3 1148 aa17.47■□□□□ 0.39
PRKCSH-203ENST00000586486 RNF157Q96PX1 679 aa17.47■□□□□ 0.39
PRKCSH-203ENST00000586486 SLC2A4RGQ9NR83 387 aa17.47■□□□□ 0.39
PRKCSH-203ENST00000586486 GTSE1Q9NYZ3 720 aa17.47■□□□□ 0.39
PRKCSH-203ENST00000586486 DNAI1Q9UI46 699 aa17.47■□□□□ 0.39
PRKCSH-203ENST00000586486 CHD5Q8TDI0 1954 aa17.46■□□□□ 0.39
PRKCSH-203ENST00000586486 TCF20Q9UGU0 1960 aaKnown RBP17.46■□□□□ 0.39
PRKCSH-203ENST00000586486 CES2O00748 559 aa17.46■□□□□ 0.39
PRKCSH-203ENST00000586486 DCLK1O15075 740 aa17.46■□□□□ 0.39
PRKCSH-203ENST00000586486 DAPK3O43293 454 aa17.46■□□□□ 0.39
PRKCSH-203ENST00000586486 LUC7L3O95232 432 aaKnown RBP17.46■□□□□ 0.39
PRKCSH-203ENST00000586486 SRFP11831 508 aa17.46■□□□□ 0.39
PRKCSH-203ENST00000586486 ERCC2P18074 760 aa17.46■□□□□ 0.39
PRKCSH-203ENST00000586486 MAPKAPK2P49137 400 aa17.46■□□□□ 0.39
PRKCSH-203ENST00000586486 PFKPQ01813 784 aa17.46■□□□□ 0.39
PRKCSH-203ENST00000586486 GAB4Q2WGN9 574 aa17.46■□□□□ 0.39
PRKCSH-203ENST00000586486 ANO4Q32M45 955 aa17.46■□□□□ 0.39
PRKCSH-203ENST00000586486 SLC9A4Q6AI14 798 aa17.46■□□□□ 0.39
PRKCSH-203ENST00000586486 SYT10Q6XYQ8 523 aa17.46■□□□□ 0.39
PRKCSH-203ENST00000586486 CIR1Q86X95 450 aaPredicted RBP17.46■□□□□ 0.39
PRKCSH-203ENST00000586486 CSGALNACT1Q8TDX6 532 aa17.46■□□□□ 0.39
PRKCSH-203ENST00000586486 SLC2A11Q9BYW1 496 aa17.46■□□□□ 0.39
PRKCSH-203ENST00000586486 TBC1D30Q9Y2I9 924 aa17.46■□□□□ 0.39
PRKCSH-203ENST00000586486 ESPNB1AK53 854 aa17.45■□□□□ 0.38
PRKCSH-203ENST00000586486 ZNF500O60304 480 aaPredicted RBP17.45■□□□□ 0.38
PRKCSH-203ENST00000586486 PRLRP16471 622 aa17.45■□□□□ 0.38
PRKCSH-203ENST00000586486 TCP1P17987 556 aaKnown RBP17.45■□□□□ 0.38
PRKCSH-203ENST00000586486 ZNF211Q13398 564 aaPredicted RBP17.45■□□□□ 0.38
PRKCSH-203ENST00000586486 TFDP2Q14188 446 aa17.45■□□□□ 0.38
PRKCSH-203ENST00000586486 SEL1L2Q5TEA6 688 aa17.45■□□□□ 0.38
PRKCSH-203ENST00000586486 SETD3Q86TU7 594 aaPredicted RBP17.45■□□□□ 0.38
PRKCSH-203ENST00000586486 ETFBKMTQ8IXQ9 262 aa17.45■□□□□ 0.38
PRKCSH-203ENST00000586486 PQLC3Q8N755 202 aa17.45■□□□□ 0.38
PRKCSH-203ENST00000586486 PBKQ96KB5 322 aa17.45■□□□□ 0.38
PRKCSH-203ENST00000586486 OSBPL9Q96SU4 736 aa17.45■□□□□ 0.38
PRKCSH-203ENST00000586486 PSMB7Q99436 277 aa17.45■□□□□ 0.38
PRKCSH-203ENST00000586486 OSBPL8Q9BZF1 889 aa17.45■□□□□ 0.38
PRKCSH-203ENST00000586486 PLK2Q9NYY3 685 aa17.45■□□□□ 0.38
PRKCSH-203ENST00000586486 FBXO10Q9UK96 956 aa17.45■□□□□ 0.38
PRKCSH-203ENST00000586486 DUSP12Q9UNI6 340 aa17.45■□□□□ 0.38
PRKCSH-203ENST00000586486 SORCS3Q9UPU3 1222 aa17.45■□□□□ 0.38
PRKCSH-203ENST00000586486 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP17.44■□□□□ 0.38
PRKCSH-203ENST00000586486 AMPD1P23109 780 aa17.44■□□□□ 0.38
PRKCSH-203ENST00000586486 CASQ1P31415 396 aa17.44■□□□□ 0.38
PRKCSH-203ENST00000586486 ZNF177Q13360 481 aaPredicted RBP17.44■□□□□ 0.38
PRKCSH-203ENST00000586486 CDH18Q13634 790 aa17.44■□□□□ 0.38
PRKCSH-203ENST00000586486 AADACL2Q6P093 401 aa17.44■□□□□ 0.38
PRKCSH-203ENST00000586486 TMCO3Q6UWJ1 677 aa17.44■□□□□ 0.38
PRKCSH-203ENST00000586486 TFAP2DQ7Z6R9 452 aa17.44■□□□□ 0.38
PRKCSH-203ENST00000586486 MFN1Q8IWA4 741 aa17.44■□□□□ 0.38
PRKCSH-203ENST00000586486 UMODL1-AS1Q8N2C9 162 aa17.44■□□□□ 0.38
PRKCSH-203ENST00000586486 FIBINQ8TAL6 211 aa17.44■□□□□ 0.38
PRKCSH-203ENST00000586486 BHMTQ93088 406 aa17.44■□□□□ 0.38
PRKCSH-203ENST00000586486 XPO6Q96QU8 1125 aaKnown RBP17.44■□□□□ 0.38
PRKCSH-203ENST00000586486 NARSO43776 548 aaKnown RBP17.43■□□□□ 0.38
PRKCSH-203ENST00000586486 ZFXP17010 805 aaPredicted RBP17.43■□□□□ 0.38
PRKCSH-203ENST00000586486 OR1E1P30953 314 aa17.43■□□□□ 0.38
PRKCSH-203ENST00000586486 GJA4P35212 333 aa17.43■□□□□ 0.38
PRKCSH-203ENST00000586486 SERPINB6P35237 376 aa17.43■□□□□ 0.38
PRKCSH-203ENST00000586486 EIF2DP41214 584 aaKnown RBP17.43■□□□□ 0.38
PRKCSH-203ENST00000586486 OXCT1P55809 520 aa17.43■□□□□ 0.38
PRKCSH-203ENST00000586486 AMPD2Q01433 879 aa17.43■□□□□ 0.38
PRKCSH-203ENST00000586486 PAFAH1B3Q15102 231 aaKnown RBP17.43■□□□□ 0.38
PRKCSH-203ENST00000586486 TJAP1Q5JTD0 557 aa17.43■□□□□ 0.38
PRKCSH-203ENST00000586486 C6orf118Q5T5N4 469 aa17.43■□□□□ 0.38
PRKCSH-203ENST00000586486 NCBP2-AS2Q69YL0 99 aa17.43■□□□□ 0.38
PRKCSH-203ENST00000586486 CXorf57Q6NSI4 855 aaKnown RBP17.43■□□□□ 0.38
PRKCSH-203ENST00000586486 ZNF783Q6ZMS7 281 aa17.43■□□□□ 0.38
PRKCSH-203ENST00000586486 BBS12Q6ZW61 710 aa17.43■□□□□ 0.38
PRKCSH-203ENST00000586486 RNF135Q8IUD6 432 aa17.43■□□□□ 0.38
PRKCSH-203ENST00000586486 CCDC117Q8IWD4 279 aaPredicted RBP17.43■□□□□ 0.38
PRKCSH-203ENST00000586486 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.43■□□□□ 0.38
PRKCSH-203ENST00000586486 CARNMT1Q8N4J0 409 aa17.43■□□□□ 0.38
PRKCSH-203ENST00000586486 LZTR1Q8N653 840 aa17.43■□□□□ 0.38
PRKCSH-203ENST00000586486 TRAF3IP1Q8TDR0 691 aaPredicted RBP17.43■□□□□ 0.38
PRKCSH-203ENST00000586486 CHFRQ96EP1 664 aa17.43■□□□□ 0.38
PRKCSH-203ENST00000586486 MSANTD3Q96H12 275 aa17.43■□□□□ 0.38
PRKCSH-203ENST00000586486 MAK16Q9BXY0 300 aaKnown RBP17.43■□□□□ 0.38
PRKCSH-203ENST00000586486 KLC2Q9H0B6 622 aa17.43■□□□□ 0.38
PRKCSH-203ENST00000586486 NDFIP2Q9NV92 336 aa17.43■□□□□ 0.38
PRKCSH-203ENST00000586486 ETNK2Q9NVF9 386 aa17.43■□□□□ 0.38
PRKCSH-203ENST00000586486 H0Y626 953 aa17.43■□□□□ 0.38
PRKCSH-203ENST00000586486 APOL1O14791 398 aa17.43■□□□□ 0.38
PRKCSH-203ENST00000586486 KRT10P13645 584 aa17.43■□□□□ 0.38
PRKCSH-203ENST00000586486 CXCR5P32302 372 aa17.43■□□□□ 0.38
PRKCSH-203ENST00000586486 AFMIDQ63HM1 303 aa17.43■□□□□ 0.38
PRKCSH-203ENST00000586486 RFX6Q8HWS3 928 aa17.43■□□□□ 0.38
PRKCSH-203ENST00000586486 PLD5Q8N7P1 536 aa17.43■□□□□ 0.38
PRKCSH-203ENST00000586486 DDX51Q8N8A6 666 aaKnown RBP eCLIP17.43■□□□□ 0.38
PRKCSH-203ENST00000586486 WFDC5Q8TCV5 224 aa17.43■□□□□ 0.38
PRKCSH-203ENST00000586486 HERPUD2Q9BSE4 406 aa17.43■□□□□ 0.38
PRKCSH-203ENST00000586486 TTC7AQ9ULT0 858 aaPredicted RBP17.43■□□□□ 0.38
PRKCSH-203ENST00000586486 CLEC4EQ9ULY5 219 aa17.43■□□□□ 0.38
PRKCSH-203ENST00000586486 SLC27A6Q9Y2P4 619 aa17.43■□□□□ 0.38
PRKCSH-203ENST00000586486 SAR1BQ9Y6B6 198 aa17.43■□□□□ 0.38
PRKCSH-203ENST00000586486 MIA3Q5JRA6 1907 aa17.42■□□□□ 0.38
PRKCSH-203ENST00000586486 ILVBLA1L0T0 632 aa17.42■□□□□ 0.38
PRKCSH-203ENST00000586486 CST8O60676 142 aa17.42■□□□□ 0.38
PRKCSH-203ENST00000586486 TULP3O75386 442 aa17.42■□□□□ 0.38
PRKCSH-203ENST00000586486 TJP3O95049 919 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms