RNA–Protein interactions for RNA: ENST00000585752.5

ATG4D-203, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 729 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-203ENST00000585752 FMO1Q01740 532 aa19.35■□□□□ 0.69
ATG4D-203ENST00000585752 FAM133BQ5BKY9 247 aaKnown RBP19.35■□□□□ 0.69
ATG4D-203ENST00000585752 MS4A13Q5J8X5 152 aa19.35■□□□□ 0.69
ATG4D-203ENST00000585752 N4BP2L1Q5TBK1 243 aaPredicted RBP19.35■□□□□ 0.69
ATG4D-203ENST00000585752 RNF219Q5W0B1 726 aaPredicted RBP19.35■□□□□ 0.69
ATG4D-203ENST00000585752 VPS36Q86VN1 386 aa19.35■□□□□ 0.69
ATG4D-203ENST00000585752 LGI2Q8N0V4 545 aa19.35■□□□□ 0.69
ATG4D-203ENST00000585752 WDTC1Q8N5D0 677 aa19.35■□□□□ 0.69
ATG4D-203ENST00000585752 DDX51Q8N8A6 666 aaKnown RBP eCLIP19.35■□□□□ 0.69
ATG4D-203ENST00000585752 FIBINQ8TAL6 211 aa19.35■□□□□ 0.69
ATG4D-203ENST00000585752 BTN2A3PQ96KV6 586 aa19.35■□□□□ 0.69
ATG4D-203ENST00000585752 MIR1-1HGQ9H1L0 117 aa19.35■□□□□ 0.69
ATG4D-203ENST00000585752 WSB2Q9NYS7 404 aaPredicted RBP19.35■□□□□ 0.69
ATG4D-203ENST00000585752 AIPL1Q9NZN9 384 aa19.35■□□□□ 0.69
ATG4D-203ENST00000585752 KIAA1522Q9P206 1035 aaPredicted RBP19.35■□□□□ 0.69
ATG4D-203ENST00000585752 CACNA1AO00555 2505 aa19.34■□□□□ 0.69
ATG4D-203ENST00000585752 FAM170AA1A519 330 aa19.34■□□□□ 0.69
ATG4D-203ENST00000585752 TM4SF5O14894 197 aa19.34■□□□□ 0.69
ATG4D-203ENST00000585752 OPHN1O60890 802 aa19.34■□□□□ 0.69
ATG4D-203ENST00000585752 RNASEH1O60930 286 aaKnown RBP19.34■□□□□ 0.69
ATG4D-203ENST00000585752 ASLP04424 464 aa19.34■□□□□ 0.69
ATG4D-203ENST00000585752 ERBB2P04626 1255 aa19.34■□□□□ 0.69
ATG4D-203ENST00000585752 CD70P32970 193 aa19.34■□□□□ 0.69
ATG4D-203ENST00000585752 NNMTP40261 264 aa19.34■□□□□ 0.69
ATG4D-203ENST00000585752 SFSWAPQ12872 951 aaKnown RBP19.34■□□□□ 0.69
ATG4D-203ENST00000585752 TTC31Q49AM3 519 aaPredicted RBP19.34■□□□□ 0.69
ATG4D-203ENST00000585752 PTPN20Q4JDL3 420 aa19.34■□□□□ 0.69
ATG4D-203ENST00000585752 ZC3H12AQ5D1E8 599 aaKnown RBP19.34■□□□□ 0.69
ATG4D-203ENST00000585752 SH3PXD2AQ5TCZ1 1133 aa19.34■□□□□ 0.69
ATG4D-203ENST00000585752 PEAR1Q5VY43 1037 aaPredicted RBP19.34■□□□□ 0.69
ATG4D-203ENST00000585752 RAP1GAP2Q684P5 730 aa19.34■□□□□ 0.69
ATG4D-203ENST00000585752 PPP1R2P3Q6NXS1 205 aa19.34■□□□□ 0.69
ATG4D-203ENST00000585752 FAM183BPQ6ZVS7 135 aa19.34■□□□□ 0.69
ATG4D-203ENST00000585752 ADIPOR2Q86V24 386 aa19.34■□□□□ 0.69
ATG4D-203ENST00000585752 FAM124AQ86V42 546 aa19.34■□□□□ 0.69
ATG4D-203ENST00000585752 GAS2L3Q86XJ1 694 aa19.34■□□□□ 0.69
ATG4D-203ENST00000585752 VSTM4Q8IW00 320 aa19.34■□□□□ 0.69
ATG4D-203ENST00000585752 GANCQ8TET4 914 aa19.34■□□□□ 0.69
ATG4D-203ENST00000585752 SLC39A13Q96H72 371 aa19.34■□□□□ 0.69
ATG4D-203ENST00000585752 ZNHIT6Q9NWK9 470 aaKnown RBP19.34■□□□□ 0.69
ATG4D-203ENST00000585752 ASNSD1Q9NWL6 643 aa19.34■□□□□ 0.69
ATG4D-203ENST00000585752 USP36Q9P275 1121 aaKnown RBP19.34■□□□□ 0.69
ATG4D-203ENST00000585752 NCKAP1Q9Y2A7 1128 aa19.34■□□□□ 0.69
ATG4D-203ENST00000585752 BZW2Q9Y6E2 419 aaKnown RBP19.34■□□□□ 0.69
ATG4D-203ENST00000585752 CDX4O14627 284 aaPredicted RBP19.33■□□□□ 0.68
ATG4D-203ENST00000585752 LUC7L3O95232 432 aaKnown RBP19.33■□□□□ 0.68
ATG4D-203ENST00000585752 GYPCP04921 128 aa19.33■□□□□ 0.68
ATG4D-203ENST00000585752 CHRNB2P17787 502 aa19.33■□□□□ 0.68
ATG4D-203ENST00000585752 TACR2P21452 398 aa19.33■□□□□ 0.68
ATG4D-203ENST00000585752 CASP14P31944 242 aa19.33■□□□□ 0.68
ATG4D-203ENST00000585752 CCR1P32246 355 aa19.33■□□□□ 0.68
ATG4D-203ENST00000585752 RPS24P62847 133 aaKnown RBP19.33■□□□□ 0.68
ATG4D-203ENST00000585752 SLC6A3Q01959 620 aa19.33■□□□□ 0.68
ATG4D-203ENST00000585752 MTA1Q13330 715 aa19.33■□□□□ 0.68
ATG4D-203ENST00000585752 CAMK2GQ13555 558 aaPredicted RBP19.33■□□□□ 0.68
ATG4D-203ENST00000585752 CLEC16AQ2KHT3 1053 aa19.33■□□□□ 0.68
ATG4D-203ENST00000585752 RABGAP1LQ5R372 815 aa19.33■□□□□ 0.68
ATG4D-203ENST00000585752 FAM102AQ5T9C2 384 aaPredicted RBP19.33■□□□□ 0.68
ATG4D-203ENST00000585752 NADSYN1Q6IA69 706 aa19.33■□□□□ 0.68
ATG4D-203ENST00000585752 IRF2BP2Q7Z5L9 587 aa19.33■□□□□ 0.68
ATG4D-203ENST00000585752 KIAA0907Q7Z7F0 614 aaPredicted RBP19.33■□□□□ 0.68
ATG4D-203ENST00000585752 SLC41A1Q8IVJ1 513 aa19.33■□□□□ 0.68
ATG4D-203ENST00000585752 DEFB106AQ8N104 65 aa19.33■□□□□ 0.68
ATG4D-203ENST00000585752 CFAP52Q8N1V2 620 aa19.33■□□□□ 0.68
ATG4D-203ENST00000585752 ZNF366Q8N895 744 aa19.33■□□□□ 0.68
ATG4D-203ENST00000585752 CADM4Q8NFZ8 388 aa19.33■□□□□ 0.68
ATG4D-203ENST00000585752 SNX19Q92543 992 aa19.33■□□□□ 0.68
ATG4D-203ENST00000585752 SYN2Q92777 582 aaPredicted RBP19.33■□□□□ 0.68
ATG4D-203ENST00000585752 PPP1R9BQ96SB3 815 aa19.33■□□□□ 0.68
ATG4D-203ENST00000585752 TMEM245Q9H330 911 aa19.33■□□□□ 0.68
ATG4D-203ENST00000585752 HAUS4Q9H6D7 363 aa19.33■□□□□ 0.68
ATG4D-203ENST00000585752 CD93Q9NPY3 652 aa19.33■□□□□ 0.68
ATG4D-203ENST00000585752 DDIT4Q9NX09 232 aa19.33■□□□□ 0.68
ATG4D-203ENST00000585752 KCNU1A8MYU2 1149 aa19.32■□□□□ 0.68
ATG4D-203ENST00000585752 ARHGAP33O14559 1287 aa19.32■□□□□ 0.68
ATG4D-203ENST00000585752 GRAP2O75791 330 aa19.32■□□□□ 0.68
ATG4D-203ENST00000585752 CYP1A1P04798 512 aaPredicted RBP19.32■□□□□ 0.68
ATG4D-203ENST00000585752 CALB1P05937 261 aa19.32■□□□□ 0.68
ATG4D-203ENST00000585752 CEACAM1P13688 526 aa19.32■□□□□ 0.68
ATG4D-203ENST00000585752 MAOBP27338 520 aa19.32■□□□□ 0.68
ATG4D-203ENST00000585752 COPAP53621 1224 aa19.32■□□□□ 0.68
ATG4D-203ENST00000585752 DCAF12L1Q5VU92 463 aa19.32■□□□□ 0.68
ATG4D-203ENST00000585752 SND1Q7KZF4 910 aaKnown RBP eCLIP19.32■□□□□ 0.68
ATG4D-203ENST00000585752 TMC6Q7Z403 805 aa19.32■□□□□ 0.68
ATG4D-203ENST00000585752 SLC30A5Q8TAD4 765 aa19.32■□□□□ 0.68
ATG4D-203ENST00000585752 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP19.32■□□□□ 0.68
ATG4D-203ENST00000585752 ANGPTL2Q9UKU9 493 aa19.32■□□□□ 0.68
ATG4D-203ENST00000585752 DNAH14Q0VDD8 3507 aa19.31■□□□□ 0.68
ATG4D-203ENST00000585752 A0A1B0GTW7 788 aa19.31■□□□□ 0.68
ATG4D-203ENST00000585752 GOLGA8SH3BPF8 625 aa19.31■□□□□ 0.68
ATG4D-203ENST00000585752 SERPING1P05155 500 aa19.31■□□□□ 0.68
ATG4D-203ENST00000585752 SKILP12757 684 aa19.31■□□□□ 0.68
ATG4D-203ENST00000585752 CSRP1P21291 193 aaKnown RBP19.31■□□□□ 0.68
ATG4D-203ENST00000585752 RDXP35241 583 aaKnown RBP19.31■□□□□ 0.68
ATG4D-203ENST00000585752 CSKP41240 450 aa19.31■□□□□ 0.68
ATG4D-203ENST00000585752 PRKCIP41743 596 aa19.31■□□□□ 0.68
ATG4D-203ENST00000585752 GABRB2P47870 512 aa19.31■□□□□ 0.68
ATG4D-203ENST00000585752 OXCT1P55809 520 aa19.31■□□□□ 0.68
ATG4D-203ENST00000585752 RNASE9P60153 205 aaKnown RBP19.31■□□□□ 0.68
ATG4D-203ENST00000585752 ZBTB16Q05516 673 aa19.31■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms