RNA–Protein interactions for RNA: ENST00000585333.1

TRIM47-202, Transcript of tripartite motif containing 47, humanhuman

TSL 3

Gene TRIM47, Length 595 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-202ENST00000585333 MFN1Q8IWA4 741 aa13.3□□□□□ -0.28
TRIM47-202ENST00000585333 SUGP1Q8IWZ8 645 aaKnown RBP13.3□□□□□ -0.28
TRIM47-202ENST00000585333 ZNF683Q8IZ20 524 aa13.3□□□□□ -0.28
TRIM47-202ENST00000585333 UMODL1-AS1Q8N2C9 162 aa13.3□□□□□ -0.28
TRIM47-202ENST00000585333 PYROXD2Q8N2H3 581 aa13.3□□□□□ -0.28
TRIM47-202ENST00000585333 PCDH19Q8TAB3 1148 aa13.3□□□□□ -0.28
TRIM47-202ENST00000585333 CSGALNACT1Q8TDX6 532 aa13.3□□□□□ -0.28
TRIM47-202ENST00000585333 GRK7Q8WTQ7 553 aa13.3□□□□□ -0.28
TRIM47-202ENST00000585333 NSMCE1Q8WV22 266 aa13.3□□□□□ -0.28
TRIM47-202ENST00000585333 ATXN2LQ8WWM7 1075 aaKnown RBP13.3□□□□□ -0.28
TRIM47-202ENST00000585333 DNASE1L2Q92874 299 aa13.3□□□□□ -0.28
TRIM47-202ENST00000585333 BBS2Q9BXC9 721 aa13.3□□□□□ -0.28
TRIM47-202ENST00000585333 MAGEH1Q9H213 219 aa13.3□□□□□ -0.28
TRIM47-202ENST00000585333 ANLNQ9NQW6 1124 aa13.3□□□□□ -0.28
TRIM47-202ENST00000585333 KIAA1522Q9P206 1035 aaPredicted RBP13.3□□□□□ -0.28
TRIM47-202ENST00000585333 XPO7Q9UIA9 1087 aaKnown RBP13.3□□□□□ -0.28
TRIM47-202ENST00000585333 HPCAL4Q9UM19 191 aa13.3□□□□□ -0.28
TRIM47-202ENST00000585333 MRFAP1Q9Y605 127 aa13.3□□□□□ -0.28
TRIM47-202ENST00000585333 PRUNE2Q8WUY3 3088 aa13.29□□□□□ -0.28
TRIM47-202ENST00000585333 UNC80Q8N2C7 3258 aa13.29□□□□□ -0.28
TRIM47-202ENST00000585333 FAM72CH0Y354 149 aa13.29□□□□□ -0.28
TRIM47-202ENST00000585333 I6L893 689 aaPredicted RBP13.29□□□□□ -0.28
TRIM47-202ENST00000585333 GFRA2O00451 464 aa13.29□□□□□ -0.28
TRIM47-202ENST00000585333 KRIT1O00522 736 aa13.29□□□□□ -0.28
TRIM47-202ENST00000585333 DCLK1O15075 740 aa13.29□□□□□ -0.28
TRIM47-202ENST00000585333 TBL1XO60907 577 aa13.29□□□□□ -0.28
TRIM47-202ENST00000585333 STK10O94804 968 aaKnown RBP13.29□□□□□ -0.28
TRIM47-202ENST00000585333 PENKP01210 267 aaPredicted RBP13.29□□□□□ -0.28
TRIM47-202ENST00000585333 RHOCP08134 193 aa13.29□□□□□ -0.28
TRIM47-202ENST00000585333 CD48P09326 243 aa13.29□□□□□ -0.28
TRIM47-202ENST00000585333 ADH5P11766 374 aa13.29□□□□□ -0.28
TRIM47-202ENST00000585333 IL4RP24394 825 aa13.29□□□□□ -0.28
TRIM47-202ENST00000585333 SLC6A4P31645 630 aa13.29□□□□□ -0.28
TRIM47-202ENST00000585333 ZXDBP98169 803 aa13.29□□□□□ -0.28
TRIM47-202ENST00000585333 KLF1Q13351 362 aaPredicted RBP13.29□□□□□ -0.28
TRIM47-202ENST00000585333 CCNG2Q16589 344 aa13.29□□□□□ -0.28
TRIM47-202ENST00000585333 ANO4Q32M45 955 aa13.29□□□□□ -0.28
TRIM47-202ENST00000585333 EML3Q32P44 896 aa13.29□□□□□ -0.28
TRIM47-202ENST00000585333 FAM72AQ5TYM5 149 aa13.29□□□□□ -0.28
TRIM47-202ENST00000585333 FAM72DQ6L9T8 149 aa13.29□□□□□ -0.28
TRIM47-202ENST00000585333 RFWD3Q6PCD5 774 aa13.29□□□□□ -0.28
TRIM47-202ENST00000585333 DRICH1Q6PGQ1 229 aaPredicted RBP13.29□□□□□ -0.28
TRIM47-202ENST00000585333 VITQ6UXI7 678 aa13.29□□□□□ -0.28
TRIM47-202ENST00000585333 FAM72BQ86X60 149 aa13.29□□□□□ -0.28
TRIM47-202ENST00000585333 CREG2Q8IUH2 290 aa13.29□□□□□ -0.28
TRIM47-202ENST00000585333 CDKL3Q8IVW4 592 aaPredicted RBP13.29□□□□□ -0.28
TRIM47-202ENST00000585333 ADGRG2Q8IZP9 1017 aa13.29□□□□□ -0.28
TRIM47-202ENST00000585333 CCDC26Q8TAB7 109 aa13.29□□□□□ -0.28
TRIM47-202ENST00000585333 FAM83CQ9BQN1 747 aa13.29□□□□□ -0.28
TRIM47-202ENST00000585333 HEMGNQ9BXL5 484 aa13.29□□□□□ -0.28
TRIM47-202ENST00000585333 BRD9Q9H8M2 597 aa13.29□□□□□ -0.28
TRIM47-202ENST00000585333 TBC1D30Q9Y2I9 924 aa13.29□□□□□ -0.28
TRIM47-202ENST00000585333 WNT6Q9Y6F9 365 aa13.29□□□□□ -0.28
TRIM47-202ENST00000585333 NUMBLQ9Y6R0 609 aa13.29□□□□□ -0.28
TRIM47-202ENST00000585333 CTAGE15A4D2H0 777 aa13.28□□□□□ -0.28
TRIM47-202ENST00000585333 C2CD4DB7Z1M9 353 aa13.28□□□□□ -0.28
TRIM47-202ENST00000585333 NRG2O14511 850 aaPredicted RBP13.28□□□□□ -0.28
TRIM47-202ENST00000585333 NDC80O14777 642 aa13.28□□□□□ -0.28
TRIM47-202ENST00000585333 CTAGE8P0CG41 777 aa13.28□□□□□ -0.28
TRIM47-202ENST00000585333 KRT10P13645 584 aa13.28□□□□□ -0.28
TRIM47-202ENST00000585333 GLULP15104 373 aa13.28□□□□□ -0.28
TRIM47-202ENST00000585333 AMPD1P23109 780 aa13.28□□□□□ -0.28
TRIM47-202ENST00000585333 GDI1P31150 447 aa13.28□□□□□ -0.28
TRIM47-202ENST00000585333 CHRNA3P32297 505 aa13.28□□□□□ -0.28
TRIM47-202ENST00000585333 ACTN2P35609 894 aa13.28□□□□□ -0.28
TRIM47-202ENST00000585333 FNTAP49354 379 aa13.28□□□□□ -0.28
TRIM47-202ENST00000585333 SULT2A1Q06520 285 aa13.28□□□□□ -0.28
TRIM47-202ENST00000585333 MMRN1Q13201 1228 aa13.28□□□□□ -0.28
TRIM47-202ENST00000585333 RUNX3Q13761 415 aa13.28□□□□□ -0.28
TRIM47-202ENST00000585333 POLD3Q15054 466 aaPredicted RBP13.28□□□□□ -0.28
TRIM47-202ENST00000585333 DHCR24Q15392 516 aa13.28□□□□□ -0.28
TRIM47-202ENST00000585333 ITPRIPL2Q3MIP1 535 aa13.28□□□□□ -0.28
TRIM47-202ENST00000585333 RNF43Q68DV7 783 aa13.28□□□□□ -0.28
TRIM47-202ENST00000585333 NCBP2-AS2Q69YL0 99 aa13.28□□□□□ -0.28
TRIM47-202ENST00000585333 PARM1Q6UWI2 310 aa13.28□□□□□ -0.28
TRIM47-202ENST00000585333 ZNF572Q7Z3I7 529 aaPredicted RBP13.28□□□□□ -0.28
TRIM47-202ENST00000585333 CTAGE6Q86UF2 777 aa13.28□□□□□ -0.28
TRIM47-202ENST00000585333 NLRP14Q86W24 1093 aa13.28□□□□□ -0.28
TRIM47-202ENST00000585333 ADHFE1Q8IWW8 467 aa13.28□□□□□ -0.28
TRIM47-202ENST00000585333 CTAGE4Q8IX94 777 aa13.28□□□□□ -0.28
TRIM47-202ENST00000585333 BBS5Q8N3I7 341 aa13.28□□□□□ -0.28
TRIM47-202ENST00000585333 ATPAF2Q8N5M1 289 aa13.28□□□□□ -0.28
TRIM47-202ENST00000585333 PLD5Q8N7P1 536 aa13.28□□□□□ -0.28
TRIM47-202ENST00000585333 FIBINQ8TAL6 211 aa13.28□□□□□ -0.28
TRIM47-202ENST00000585333 CCHCR1Q8TD31 782 aa13.28□□□□□ -0.28
TRIM47-202ENST00000585333 WFIKKN2Q8TEU8 576 aa13.28□□□□□ -0.28
TRIM47-202ENST00000585333 COG1Q8WTW3 980 aa13.28□□□□□ -0.28
TRIM47-202ENST00000585333 FATE1Q969F0 183 aa13.28□□□□□ -0.28
TRIM47-202ENST00000585333 CAPZA3Q96KX2 299 aa13.28□□□□□ -0.28
TRIM47-202ENST00000585333 PRICKLE1Q96MT3 831 aaPredicted RBP13.28□□□□□ -0.28
TRIM47-202ENST00000585333 KXD1Q9BQD3 176 aa13.28□□□□□ -0.28
TRIM47-202ENST00000585333 C2orf49Q9BVC5 232 aaPredicted RBP13.28□□□□□ -0.28
TRIM47-202ENST00000585333 C8orf33Q9H7E9 229 aaPredicted RBP13.28□□□□□ -0.28
TRIM47-202ENST00000585333 ECT2Q9H8V3 914 aa13.28□□□□□ -0.28
TRIM47-202ENST00000585333 TMPRSS4Q9NRS4 437 aa13.28□□□□□ -0.28
TRIM47-202ENST00000585333 CDH22Q9UJ99 828 aa13.28□□□□□ -0.28
TRIM47-202ENST00000585333 GOLGA6L7A0A1B0GV03 622 aa13.27□□□□□ -0.29
TRIM47-202ENST00000585333 NEDD8-MDP1E9PL57 170 aa13.27□□□□□ -0.29
TRIM47-202ENST00000585333 CACNG3O60359 315 aa13.27□□□□□ -0.29
TRIM47-202ENST00000585333 TSPAN3O60637 253 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms