RNA–Protein interactions for RNA: ENST00000585163.5

CDK5RAP3-237, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,519 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-237ENST00000585163 DCAF6Q58WW2 860 aa14.54□□□□□ -0.08
CDK5RAP3-237ENST00000585163 DCLK2Q8N568 766 aa14.54□□□□□ -0.08
CDK5RAP3-237ENST00000585163 JADE3Q92613 823 aa14.54□□□□□ -0.08
CDK5RAP3-237ENST00000585163 FAM149B1Q96BN6 582 aa14.54□□□□□ -0.08
CDK5RAP3-237ENST00000585163 KLHL33A6NCF5 533 aa14.53□□□□□ -0.08
CDK5RAP3-237ENST00000585163 KPNA7A9QM74 516 aa14.53□□□□□ -0.08
CDK5RAP3-237ENST00000585163 XPO1O14980 1071 aaKnown RBP14.53□□□□□ -0.08
CDK5RAP3-237ENST00000585163 DAB1O75553 588 aa14.53□□□□□ -0.08
CDK5RAP3-237ENST00000585163 NCF2P19878 526 aaPredicted RBP14.53□□□□□ -0.08
CDK5RAP3-237ENST00000585163 SERPINB8P50452 374 aa14.53□□□□□ -0.08
CDK5RAP3-237ENST00000585163 PITX1P78337 314 aaPredicted RBP14.53□□□□□ -0.08
CDK5RAP3-237ENST00000585163 ASPHQ12797 758 aa14.53□□□□□ -0.08
CDK5RAP3-237ENST00000585163 ZNF618Q5T7W0 954 aa14.53□□□□□ -0.08
CDK5RAP3-237ENST00000585163 PIGZQ86VD9 579 aa14.53□□□□□ -0.08
CDK5RAP3-237ENST00000585163 TNS4Q8IZW8 715 aa14.53□□□□□ -0.08
CDK5RAP3-237ENST00000585163 PLD6Q8N2A8 252 aaKnown RBP14.53□□□□□ -0.08
CDK5RAP3-237ENST00000585163 GALNT15Q8N3T1 639 aa14.53□□□□□ -0.08
CDK5RAP3-237ENST00000585163 NME8Q8N427 588 aa14.53□□□□□ -0.08
CDK5RAP3-237ENST00000585163 NDRG1Q92597 394 aaKnown RBP14.53□□□□□ -0.08
CDK5RAP3-237ENST00000585163 FAM192AQ9GZU8 254 aa14.53□□□□□ -0.08
CDK5RAP3-237ENST00000585163 ADAMTS10Q9H324 1103 aa14.53□□□□□ -0.08
CDK5RAP3-237ENST00000585163 RNF19AQ9NV58 838 aa14.53□□□□□ -0.08
CDK5RAP3-237ENST00000585163 GDAP2Q9NXN4 497 aa14.53□□□□□ -0.08
CDK5RAP3-237ENST00000585163 UBQLN1Q9UMX0 589 aaKnown RBP14.53□□□□□ -0.08
CDK5RAP3-237ENST00000585163 CDY2AQ9Y6F7 541 aa14.53□□□□□ -0.08
CDK5RAP3-237ENST00000585163 CDY1Q9Y6F8 540 aa14.53□□□□□ -0.08
CDK5RAP3-237ENST00000585163 ZNF638Q14966 1978 aaKnown RBP14.53□□□□□ -0.08
CDK5RAP3-237ENST00000585163 SPTLC1O15269 473 aa14.53□□□□□ -0.08
CDK5RAP3-237ENST00000585163 CREB3O43889 395 aa14.53□□□□□ -0.08
CDK5RAP3-237ENST00000585163 PDE5AO76074 875 aa14.53□□□□□ -0.08
CDK5RAP3-237ENST00000585163 SORBS2O94875 1100 aaKnown RBP14.53□□□□□ -0.08
CDK5RAP3-237ENST00000585163 ITGAXP20702 1163 aa14.53□□□□□ -0.08
CDK5RAP3-237ENST00000585163 PRDX6P30041 224 aa14.53□□□□□ -0.08
CDK5RAP3-237ENST00000585163 SPRP35270 261 aaPredicted RBP14.53□□□□□ -0.08
CDK5RAP3-237ENST00000585163 LIMK2P53671 638 aa14.53□□□□□ -0.08
CDK5RAP3-237ENST00000585163 ADIGQ0VDE8 80 aa14.53□□□□□ -0.08
CDK5RAP3-237ENST00000585163 MTA1Q13330 715 aa14.53□□□□□ -0.08
CDK5RAP3-237ENST00000585163 DPYSQ14117 519 aa14.53□□□□□ -0.08
CDK5RAP3-237ENST00000585163 EPGNQ6UW88 154 aa14.53□□□□□ -0.08
CDK5RAP3-237ENST00000585163 FRMD7Q6ZUT3 714 aa14.53□□□□□ -0.08
CDK5RAP3-237ENST00000585163 PID1Q7Z2X4 250 aa14.53□□□□□ -0.08
CDK5RAP3-237ENST00000585163 TMEM135Q86UB9 458 aa14.53□□□□□ -0.08
CDK5RAP3-237ENST00000585163 PDSS2Q86YH6 399 aa14.53□□□□□ -0.08
CDK5RAP3-237ENST00000585163 SULF1Q8IWU6 871 aa14.53□□□□□ -0.08
CDK5RAP3-237ENST00000585163 ANKRD13AQ8IZ07 590 aa14.53□□□□□ -0.08
CDK5RAP3-237ENST00000585163 PHTF2Q8N3S3 785 aa14.53□□□□□ -0.08
CDK5RAP3-237ENST00000585163 SHCBP1Q8NEM2 672 aa14.53□□□□□ -0.08
CDK5RAP3-237ENST00000585163 OR52K1Q8NGK4 314 aa14.53□□□□□ -0.08
CDK5RAP3-237ENST00000585163 SLC26A7Q8TE54 656 aa14.53□□□□□ -0.08
CDK5RAP3-237ENST00000585163 NPY6RQ99463 290 aa14.53□□□□□ -0.08
CDK5RAP3-237ENST00000585163 SH3GL3Q99963 347 aa14.53□□□□□ -0.08
CDK5RAP3-237ENST00000585163 DDX50Q9BQ39 737 aaKnown RBP14.53□□□□□ -0.08
CDK5RAP3-237ENST00000585163 CCDC28BQ9BUN5 200 aa14.53□□□□□ -0.08
CDK5RAP3-237ENST00000585163 SHCBP1LQ9BZQ2 653 aa14.53□□□□□ -0.08
CDK5RAP3-237ENST00000585163 SNX25Q9H3E2 840 aa14.53□□□□□ -0.08
CDK5RAP3-237ENST00000585163 LRRC40Q9H9A6 602 aa14.53□□□□□ -0.08
CDK5RAP3-237ENST00000585163 COG4Q9H9E3 785 aa14.53□□□□□ -0.08
CDK5RAP3-237ENST00000585163 VTA1Q9NP79 307 aa14.53□□□□□ -0.08
CDK5RAP3-237ENST00000585163 POMPQ9Y244 141 aa14.53□□□□□ -0.08
CDK5RAP3-237ENST00000585163 GINS2Q9Y248 185 aa14.53□□□□□ -0.08
CDK5RAP3-237ENST00000585163 RBM47A0AV96 593 aaKnown RBP14.52□□□□□ -0.08
CDK5RAP3-237ENST00000585163 E2F8A0AVK6 867 aa14.52□□□□□ -0.08
CDK5RAP3-237ENST00000585163 CAPN15O75808 1086 aa14.52□□□□□ -0.08
CDK5RAP3-237ENST00000585163 RECQL4O94761 1208 aa14.52□□□□□ -0.08
CDK5RAP3-237ENST00000585163 ZCCHC18P0CG32 403 aa14.52□□□□□ -0.08
CDK5RAP3-237ENST00000585163 TKTP29401 623 aaKnown RBP14.52□□□□□ -0.08
CDK5RAP3-237ENST00000585163 NOS2P35228 1153 aa14.52□□□□□ -0.08
CDK5RAP3-237ENST00000585163 ADCYAP1R1P41586 468 aa14.52□□□□□ -0.08
CDK5RAP3-237ENST00000585163 OLIG2Q13516 323 aa14.52□□□□□ -0.08
CDK5RAP3-237ENST00000585163 FSTL4Q6MZW2 842 aa14.52□□□□□ -0.08
CDK5RAP3-237ENST00000585163 NOTUMQ6P988 496 aa14.52□□□□□ -0.08
CDK5RAP3-237ENST00000585163 CATSPER4Q7RTX7 472 aa14.52□□□□□ -0.08
CDK5RAP3-237ENST00000585163 STRA8Q7Z7C7 330 aa14.52□□□□□ -0.08
CDK5RAP3-237ENST00000585163 TP53INP2Q8IXH6 220 aa14.52□□□□□ -0.08
CDK5RAP3-237ENST00000585163 DEFB107AQ8IZN7 70 aa14.52□□□□□ -0.08
CDK5RAP3-237ENST00000585163 PGLYRP2Q96PD5 576 aa14.52□□□□□ -0.08
CDK5RAP3-237ENST00000585163 TUBGCP5Q96RT8 1024 aa14.52□□□□□ -0.08
CDK5RAP3-237ENST00000585163 GORASP1Q9BQQ3 440 aa14.52□□□□□ -0.08
CDK5RAP3-237ENST00000585163 CDH19Q9H159 772 aa14.52□□□□□ -0.08
CDK5RAP3-237ENST00000585163 NXF3Q9H4D5 531 aaKnown RBP14.52□□□□□ -0.08
CDK5RAP3-237ENST00000585163 CYP4F11Q9HBI6 524 aa14.52□□□□□ -0.08
CDK5RAP3-237ENST00000585163 LOC100653049A0A140TA62 436 aa14.52□□□□□ -0.09
CDK5RAP3-237ENST00000585163 G3V2L1 256 aa14.52□□□□□ -0.09
CDK5RAP3-237ENST00000585163 KCNK1O00180 336 aa14.52□□□□□ -0.09
CDK5RAP3-237ENST00000585163 DCLK1O15075 740 aa14.52□□□□□ -0.09
CDK5RAP3-237ENST00000585163 DCXO43602 365 aa14.52□□□□□ -0.09
CDK5RAP3-237ENST00000585163 KRT34O76011 436 aa14.52□□□□□ -0.09
CDK5RAP3-237ENST00000585163 CD4P01730 458 aa14.52□□□□□ -0.09
CDK5RAP3-237ENST00000585163 ROR2Q01974 943 aaKnown RBP14.52□□□□□ -0.09
CDK5RAP3-237ENST00000585163 USP4Q13107 963 aa14.52□□□□□ -0.09
CDK5RAP3-237ENST00000585163 PPIL2Q13356 520 aa14.52□□□□□ -0.09
CDK5RAP3-237ENST00000585163 BIRC2Q13490 618 aa14.52□□□□□ -0.09
CDK5RAP3-237ENST00000585163 FRG1Q14331 258 aaKnown RBP14.52□□□□□ -0.09
CDK5RAP3-237ENST00000585163 FSCBQ5H9T9 825 aa14.52□□□□□ -0.09
CDK5RAP3-237ENST00000585163 NAPRTQ6XQN6 538 aa14.52□□□□□ -0.09
CDK5RAP3-237ENST00000585163 ACAD11Q709F0 780 aa14.52□□□□□ -0.09
CDK5RAP3-237ENST00000585163 LIMS2Q7Z4I7 341 aa14.52□□□□□ -0.09
CDK5RAP3-237ENST00000585163 CLEC14AQ86T13 490 aa14.52□□□□□ -0.09
CDK5RAP3-237ENST00000585163 ZNF781Q8N8C0 355 aa14.52□□□□□ -0.09
CDK5RAP3-237ENST00000585163 SERBP1Q8NC51 408 aaKnown RBP eCLIP14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms