RNA–Protein interactions for RNA: ENST00000584755.1

UBBP4-202, Transcript of ubiquitin B pseudogene 4, humanhuman

TSL 1 (best) BASIC

Gene UBBP4, Length 1,459 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP4-202ENST00000584755 NKX2-4Q9H2Z4 354 aa14.38□□□□□ -0.11
UBBP4-202ENST00000584755 GKN1Q9NS71 199 aa14.38□□□□□ -0.11
UBBP4-202ENST00000584755 NDFIP2Q9NV92 336 aa14.38□□□□□ -0.11
UBBP4-202ENST00000584755 ZDHHC7Q9NXF8 308 aa14.38□□□□□ -0.11
UBBP4-202ENST00000584755 MPP6Q9NZW5 540 aa14.38□□□□□ -0.11
UBBP4-202ENST00000584755 DPP7Q9UHL4 492 aa14.38□□□□□ -0.11
UBBP4-202ENST00000584755 HPCAL4Q9UM19 191 aa14.38□□□□□ -0.11
UBBP4-202ENST00000584755 RANBP2P49792 3224 aaKnown RBP14.37□□□□□ -0.11
UBBP4-202ENST00000584755 A0A0A0MRY4 1105 aa14.37□□□□□ -0.11
UBBP4-202ENST00000584755 NRG2O14511 850 aaPredicted RBP14.37□□□□□ -0.11
UBBP4-202ENST00000584755 MTSS1O43312 755 aa14.37□□□□□ -0.11
UBBP4-202ENST00000584755 MBL2P11226 248 aaPredicted RBP14.37□□□□□ -0.11
UBBP4-202ENST00000584755 PTPN2P17706 415 aa14.37□□□□□ -0.11
UBBP4-202ENST00000584755 HDCP19113 662 aa14.37□□□□□ -0.11
UBBP4-202ENST00000584755 SLC6A4P31645 630 aa14.37□□□□□ -0.11
UBBP4-202ENST00000584755 ACTN2P35609 894 aa14.37□□□□□ -0.11
UBBP4-202ENST00000584755 IRAK1P51617 712 aa14.37□□□□□ -0.11
UBBP4-202ENST00000584755 NDST2P52849 883 aa14.37□□□□□ -0.11
UBBP4-202ENST00000584755 CYP4F8P98187 520 aa14.37□□□□□ -0.11
UBBP4-202ENST00000584755 DHX9Q08211 1270 aaKnown RBP14.37□□□□□ -0.11
UBBP4-202ENST00000584755 WASHC5Q12768 1159 aa14.37□□□□□ -0.11
UBBP4-202ENST00000584755 CBLBQ13191 982 aa14.37□□□□□ -0.11
UBBP4-202ENST00000584755 SLMAPQ14BN4 828 aa14.37□□□□□ -0.11
UBBP4-202ENST00000584755 PPP2R2DQ66LE6 453 aa14.37□□□□□ -0.11
UBBP4-202ENST00000584755 PPIL6Q8IXY8 311 aa14.37□□□□□ -0.11
UBBP4-202ENST00000584755 ZCCHC9Q8N567 271 aaKnown RBP14.37□□□□□ -0.11
UBBP4-202ENST00000584755 CCDC33Q8N5R6 958 aa14.37□□□□□ -0.11
UBBP4-202ENST00000584755 ARL14EPQ8N8R7 260 aaPredicted RBP14.37□□□□□ -0.11
UBBP4-202ENST00000584755 NETO2Q8NC67 525 aa14.37□□□□□ -0.11
UBBP4-202ENST00000584755 LRRN4Q8WUT4 740 aa14.37□□□□□ -0.11
UBBP4-202ENST00000584755 PRCCQ92733 491 aaPredicted RBP14.37□□□□□ -0.11
UBBP4-202ENST00000584755 WBP2Q969T9 261 aa14.37□□□□□ -0.11
UBBP4-202ENST00000584755 SPATA13Q96N96 652 aa14.37□□□□□ -0.11
UBBP4-202ENST00000584755 GCNAQ96QF7 691 aa14.37□□□□□ -0.11
UBBP4-202ENST00000584755 CYP2S1Q96SQ9 504 aa14.37□□□□□ -0.11
UBBP4-202ENST00000584755 FERMT1Q9BQL6 677 aa14.37□□□□□ -0.11
UBBP4-202ENST00000584755 CORO1BQ9BR76 489 aa14.37□□□□□ -0.11
UBBP4-202ENST00000584755 PHACTR1Q9C0D0 580 aa14.37□□□□□ -0.11
UBBP4-202ENST00000584755 NOL6Q9H6R4 1146 aaKnown RBP14.37□□□□□ -0.11
UBBP4-202ENST00000584755 TRPC7Q9HCX4 862 aa14.37□□□□□ -0.11
UBBP4-202ENST00000584755 FAM53CQ9NYF3 392 aa14.37□□□□□ -0.11
UBBP4-202ENST00000584755 HCFC2Q9Y5Z7 792 aa14.37□□□□□ -0.11
UBBP4-202ENST00000584755 GOLGA6L7A0A1B0GV03 622 aa14.36□□□□□ -0.11
UBBP4-202ENST00000584755 A0A1W2PRU2 124 aa14.36□□□□□ -0.11
UBBP4-202ENST00000584755 F5H5T6 163 aa14.36□□□□□ -0.11
UBBP4-202ENST00000584755 H0YGN5 161 aa14.36□□□□□ -0.11
UBBP4-202ENST00000584755 GFRA2O00451 464 aa14.36□□□□□ -0.11
UBBP4-202ENST00000584755 OPHN1O60890 802 aa14.36□□□□□ -0.11
UBBP4-202ENST00000584755 MOSPD3O75425 235 aa14.36□□□□□ -0.11
UBBP4-202ENST00000584755 CNTN5O94779 1100 aa14.36□□□□□ -0.11
UBBP4-202ENST00000584755 DDX6P26196 483 aaKnown RBP eCLIP14.36□□□□□ -0.11
UBBP4-202ENST00000584755 CORO1AP31146 461 aaKnown RBP14.36□□□□□ -0.11
UBBP4-202ENST00000584755 CCR2P41597 374 aa14.36□□□□□ -0.11
UBBP4-202ENST00000584755 MAPKAPK2P49137 400 aa14.36□□□□□ -0.11
UBBP4-202ENST00000584755 SMAD3P84022 425 aaKnown RBP14.36□□□□□ -0.11
UBBP4-202ENST00000584755 ZXDBP98169 803 aa14.36□□□□□ -0.11
UBBP4-202ENST00000584755 AP1B1Q10567 949 aa14.36□□□□□ -0.11
UBBP4-202ENST00000584755 KCNC3Q14003 757 aa14.36□□□□□ -0.11
UBBP4-202ENST00000584755 KCNJ11Q14654 390 aa14.36□□□□□ -0.11
UBBP4-202ENST00000584755 DUSP6Q16828 381 aa14.36□□□□□ -0.11
UBBP4-202ENST00000584755 ALFQ53S48 1182 aa14.36□□□□□ -0.11
UBBP4-202ENST00000584755 ADGRF1Q5T601 910 aa14.36□□□□□ -0.11
UBBP4-202ENST00000584755 Q6ZNB5 142 aa14.36□□□□□ -0.11
UBBP4-202ENST00000584755 CEP128Q6ZU80 1094 aa14.36□□□□□ -0.11
UBBP4-202ENST00000584755 ADGRD2Q7Z7M1 963 aa14.36□□□□□ -0.11
UBBP4-202ENST00000584755 RELL1Q8IUW5 271 aa14.36□□□□□ -0.11
UBBP4-202ENST00000584755 DENND1CQ8IV53 801 aa14.36□□□□□ -0.11
UBBP4-202ENST00000584755 CCNYQ8ND76 341 aa14.36□□□□□ -0.11
UBBP4-202ENST00000584755 ZSCAN18Q8TBC5 510 aaPredicted RBP14.36□□□□□ -0.11
UBBP4-202ENST00000584755 CCDC110Q8TBZ0 833 aa14.36□□□□□ -0.11
UBBP4-202ENST00000584755 FATE1Q969F0 183 aa14.36□□□□□ -0.11
UBBP4-202ENST00000584755 MYEOVQ96EZ4 313 aa14.36□□□□□ -0.11
UBBP4-202ENST00000584755 SLC39A8Q9C0K1 460 aa14.36□□□□□ -0.11
UBBP4-202ENST00000584755 ATXN3LQ9H3M9 355 aa14.36□□□□□ -0.11
UBBP4-202ENST00000584755 HCFC1R1Q9NWW0 138 aa14.36□□□□□ -0.11
UBBP4-202ENST00000584755 DNMT3BQ9UBC3 853 aaKnown RBP14.36□□□□□ -0.11
UBBP4-202ENST00000584755 AGO1Q9UL18 857 aaKnown RBP14.36□□□□□ -0.11
UBBP4-202ENST00000584755 MYO7AQ13402 2215 aa14.35□□□□□ -0.11
UBBP4-202ENST00000584755 TRAV19A0A0A6YYK7 116 aa14.35□□□□□ -0.11
UBBP4-202ENST00000584755 RNF103O00237 685 aa14.35□□□□□ -0.11
UBBP4-202ENST00000584755 PER2O15055 1255 aa14.35□□□□□ -0.11
UBBP4-202ENST00000584755 CHADO15335 359 aa14.35□□□□□ -0.11
UBBP4-202ENST00000584755 XYLBO75191 536 aa14.35□□□□□ -0.11
UBBP4-202ENST00000584755 STK10O94804 968 aaKnown RBP14.35□□□□□ -0.11
UBBP4-202ENST00000584755 MYL4P12829 197 aa14.35□□□□□ -0.11
UBBP4-202ENST00000584755 CCNCP24863 283 aa14.35□□□□□ -0.11
UBBP4-202ENST00000584755 CHKAP35790 457 aa14.35□□□□□ -0.11
UBBP4-202ENST00000584755 UAP1Q16222 522 aaPredicted RBP14.35□□□□□ -0.11
UBBP4-202ENST00000584755 ANKRD20A2Q5SQ80 823 aa14.35□□□□□ -0.11
UBBP4-202ENST00000584755 ANKRD20A1Q5TYW2 823 aa14.35□□□□□ -0.11
UBBP4-202ENST00000584755 ANKRD20A3Q5VUR7 823 aa14.35□□□□□ -0.11
UBBP4-202ENST00000584755 ANKRD22Q5VYY1 191 aa14.35□□□□□ -0.11
UBBP4-202ENST00000584755 ALS2CLQ60I27 953 aa14.35□□□□□ -0.11
UBBP4-202ENST00000584755 ELMSAN1Q6PJG2 1045 aa14.35□□□□□ -0.11
UBBP4-202ENST00000584755 FAM217AQ8IXS0 508 aa14.35□□□□□ -0.11
UBBP4-202ENST00000584755 CCDC13Q8IYE1 715 aa14.35□□□□□ -0.11
UBBP4-202ENST00000584755 IQCKQ8N0W5 287 aa14.35□□□□□ -0.11
UBBP4-202ENST00000584755 SHKBP1Q8TBC3 707 aa14.35□□□□□ -0.11
UBBP4-202ENST00000584755 ARNTL2Q8WYA1 636 aa14.35□□□□□ -0.11
UBBP4-202ENST00000584755 ZNF707Q96C28 371 aaPredicted RBP14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms