RNA–Protein interactions for RNA: ENST00000584582.5

TOP3A-217, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 3,661 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-217ENST00000584582 PDE5AO76074 875 aa11.57□□□□□ -0.56
TOP3A-217ENST00000584582 UNC5CO95185 931 aa11.57□□□□□ -0.56
TOP3A-217ENST00000584582 VAV1P15498 845 aa11.57□□□□□ -0.56
TOP3A-217ENST00000584582 FDFT1P37268 417 aa11.57□□□□□ -0.56
TOP3A-217ENST00000584582 CHRNA4P43681 627 aa11.57□□□□□ -0.56
TOP3A-217ENST00000584582 HIC1Q14526 733 aa11.57□□□□□ -0.56
TOP3A-217ENST00000584582 ZNF460Q14592 562 aa11.57□□□□□ -0.56
TOP3A-217ENST00000584582 RCN1Q15293 331 aa11.57□□□□□ -0.56
TOP3A-217ENST00000584582 NCBP2-AS2Q69YL0 99 aa11.57□□□□□ -0.56
TOP3A-217ENST00000584582 RGMBQ6NW40 437 aa11.57□□□□□ -0.56
TOP3A-217ENST00000584582 RGS9BPQ6ZS82 235 aa11.57□□□□□ -0.56
TOP3A-217ENST00000584582 DCAKDQ8WVC6 231 aa11.57□□□□□ -0.56
TOP3A-217ENST00000584582 KBTBD7Q8WVZ9 684 aa11.57□□□□□ -0.56
TOP3A-217ENST00000584582 PHF21BQ96EK2 531 aa11.57□□□□□ -0.56
TOP3A-217ENST00000584582 TRPV6Q9H1D0 765 aa11.57□□□□□ -0.56
TOP3A-217ENST00000584582 LRRC40Q9H9A6 602 aa11.57□□□□□ -0.56
TOP3A-217ENST00000584582 DMAP1Q9NPF5 467 aaPredicted RBP11.57□□□□□ -0.56
TOP3A-217ENST00000584582 CRTAC1Q9NQ79 661 aa11.57□□□□□ -0.56
TOP3A-217ENST00000584582 PRDM5Q9NQX1 630 aaPredicted RBP11.57□□□□□ -0.56
TOP3A-217ENST00000584582 SLC12A8A0AV02 714 aa11.56□□□□□ -0.56
TOP3A-217ENST00000584582 TM9SF1O15321 606 aa11.56□□□□□ -0.56
TOP3A-217ENST00000584582 RALBP11234 206 aa11.56□□□□□ -0.56
TOP3A-217ENST00000584582 SP100P23497 879 aaPredicted RBP11.56□□□□□ -0.56
TOP3A-217ENST00000584582 NME5P56597 212 aa11.56□□□□□ -0.56
TOP3A-217ENST00000584582 MGAT5Q09328 741 aa11.56□□□□□ -0.56
TOP3A-217ENST00000584582 FAM187BQ17R55 369 aa11.56□□□□□ -0.56
TOP3A-217ENST00000584582 MAP7D1Q3KQU3 841 aa11.56□□□□□ -0.56
TOP3A-217ENST00000584582 CAND1Q86VP6 1230 aaKnown RBP11.56□□□□□ -0.56
TOP3A-217ENST00000584582 ZDHHC17Q8IUH5 632 aa11.56□□□□□ -0.56
TOP3A-217ENST00000584582 CFAP52Q8N1V2 620 aa11.56□□□□□ -0.56
TOP3A-217ENST00000584582 UBR7Q8N806 425 aa11.56□□□□□ -0.56
TOP3A-217ENST00000584582 PRR11Q96HE9 360 aaPredicted RBP11.56□□□□□ -0.56
TOP3A-217ENST00000584582 RUVBL2Q9Y230 463 aaKnown RBP11.56□□□□□ -0.56
TOP3A-217ENST00000584582 C5orf60A6NFR6 353 aa11.56□□□□□ -0.56
TOP3A-217ENST00000584582 CACNA2D1P54289 1103 aa11.56□□□□□ -0.56
TOP3A-217ENST00000584582 CRYMQ14894 314 aa11.56□□□□□ -0.56
TOP3A-217ENST00000584582 CNGA3Q16281 694 aa11.56□□□□□ -0.56
TOP3A-217ENST00000584582 FBXO48Q5FWF7 155 aa11.56□□□□□ -0.56
TOP3A-217ENST00000584582 KCNMB4Q86W47 210 aa11.56□□□□□ -0.56
TOP3A-217ENST00000584582 URGCPQ8TCY9 931 aa11.56□□□□□ -0.56
TOP3A-217ENST00000584582 FBXO32Q969P5 355 aa11.56□□□□□ -0.56
TOP3A-217ENST00000584582 IFT43Q96FT9 208 aa11.56□□□□□ -0.56
TOP3A-217ENST00000584582 CCDC68Q9H2F9 335 aa11.56□□□□□ -0.56
TOP3A-217ENST00000584582 PNPOQ9NVS9 261 aa11.56□□□□□ -0.56
TOP3A-217ENST00000584582 EFR3BQ9Y2G0 817 aa11.56□□□□□ -0.56
TOP3A-217ENST00000584582 FARP1Q9Y4F1 1045 aaPredicted RBP11.56□□□□□ -0.56
TOP3A-217ENST00000584582 SDK1Q7Z5N4 2213 aa11.56□□□□□ -0.56
TOP3A-217ENST00000584582 MANSC4A6NHS7 340 aaPredicted RBP11.56□□□□□ -0.56
TOP3A-217ENST00000584582 DCXO43602 365 aa11.56□□□□□ -0.56
TOP3A-217ENST00000584582 PQBP1O60828 265 aaKnown RBP11.56□□□□□ -0.56
TOP3A-217ENST00000584582 OPHN1O60890 802 aa11.56□□□□□ -0.56
TOP3A-217ENST00000584582 ENO3P13929 434 aaPredicted RBP11.56□□□□□ -0.56
TOP3A-217ENST00000584582 CPA3P15088 417 aa11.56□□□□□ -0.56
TOP3A-217ENST00000584582 IL4RP24394 825 aa11.56□□□□□ -0.56
TOP3A-217ENST00000584582 CSHL1Q14406 222 aa11.56□□□□□ -0.56
TOP3A-217ENST00000584582 RPS6KA2Q15349 733 aa11.56□□□□□ -0.56
TOP3A-217ENST00000584582 GRAMD1BQ3KR37 738 aa11.56□□□□□ -0.56
TOP3A-217ENST00000584582 TAC4Q86UU9 113 aa11.56□□□□□ -0.56
TOP3A-217ENST00000584582 SMG8Q8ND04 991 aaKnown RBP11.56□□□□□ -0.56
TOP3A-217ENST00000584582 SKA2Q8WVK7 121 aaPredicted RBP11.56□□□□□ -0.56
TOP3A-217ENST00000584582 OXNAD1Q96HP4 312 aaPredicted RBP11.56□□□□□ -0.56
TOP3A-217ENST00000584582 FCRL2Q96LA5 508 aaPredicted RBP11.56□□□□□ -0.56
TOP3A-217ENST00000584582 TRPC7Q9HCX4 862 aa11.56□□□□□ -0.56
TOP3A-217ENST00000584582 CRYL1Q9Y2S2 319 aa11.56□□□□□ -0.56
TOP3A-217ENST00000584582 LTBP1Q14766 1721 aa11.55□□□□□ -0.56
TOP3A-217ENST00000584582 QSER1Q2KHR3 1735 aa11.55□□□□□ -0.56
TOP3A-217ENST00000584582 NUP205Q92621 2012 aa11.55□□□□□ -0.56
TOP3A-217ENST00000584582 PTGESO14684 152 aa11.55□□□□□ -0.56
TOP3A-217ENST00000584582 ITGBL1O95965 494 aaPredicted RBP11.55□□□□□ -0.56
TOP3A-217ENST00000584582 ITGB1P05556 798 aa11.55□□□□□ -0.56
TOP3A-217ENST00000584582 ITGA2BP08514 1039 aa11.55□□□□□ -0.56
TOP3A-217ENST00000584582 AXLP30530 894 aa11.55□□□□□ -0.56
TOP3A-217ENST00000584582 NR2C2P49116 596 aa11.55□□□□□ -0.56
TOP3A-217ENST00000584582 GPR15P49685 360 aa11.55□□□□□ -0.56
TOP3A-217ENST00000584582 SERPINB9P50453 376 aa11.55□□□□□ -0.56
TOP3A-217ENST00000584582 CCL23P55773 120 aa11.55□□□□□ -0.56
TOP3A-217ENST00000584582 ZNF235Q14590 738 aa11.55□□□□□ -0.56
TOP3A-217ENST00000584582 ZNF470Q6ECI4 717 aa11.55□□□□□ -0.56
TOP3A-217ENST00000584582 C10orf107Q8IVU9 208 aa11.55□□□□□ -0.56
TOP3A-217ENST00000584582 CERS2Q96G23 380 aa11.55□□□□□ -0.56
TOP3A-217ENST00000584582 SMOQ99835 787 aa11.55□□□□□ -0.56
TOP3A-217ENST00000584582 MTO1Q9Y2Z2 717 aaKnown RBP11.55□□□□□ -0.56
TOP3A-217ENST00000584582 STARD13Q9Y3M8 1113 aa11.55□□□□□ -0.56
TOP3A-217ENST00000584582 NME7Q9Y5B8 376 aa11.55□□□□□ -0.56
TOP3A-217ENST00000584582 TEX264Q9Y6I9 313 aa11.55□□□□□ -0.56
TOP3A-217ENST00000584582 COL1A2P08123 1366 aa11.55□□□□□ -0.56
TOP3A-217ENST00000584582 NAGLUP54802 743 aa11.55□□□□□ -0.56
TOP3A-217ENST00000584582 SLC25A3Q00325 362 aa11.55□□□□□ -0.56
TOP3A-217ENST00000584582 MOGSQ13724 837 aa11.55□□□□□ -0.56
TOP3A-217ENST00000584582 KPNB1Q14974 876 aaKnown RBP11.55□□□□□ -0.56
TOP3A-217ENST00000584582 BANPQ8N9N5 519 aa11.55□□□□□ -0.56
TOP3A-217ENST00000584582 C3orf58Q8NDZ4 430 aa11.55□□□□□ -0.56
TOP3A-217ENST00000584582 EBF4Q9BQW3 602 aa11.55□□□□□ -0.56
TOP3A-217ENST00000584582 TCRBV5S1A1TA0A578 114 aa11.55□□□□□ -0.56
TOP3A-217ENST00000584582 SMAPO00193 183 aa11.55□□□□□ -0.56
TOP3A-217ENST00000584582 GCAP28676 217 aa11.55□□□□□ -0.56
TOP3A-217ENST00000584582 CCR1P32246 355 aa11.55□□□□□ -0.56
TOP3A-217ENST00000584582 SLC1A6P48664 564 aa11.55□□□□□ -0.56
TOP3A-217ENST00000584582 PURAQ00577 322 aaKnown RBP11.55□□□□□ -0.56
TOP3A-217ENST00000584582 KCNJ11Q14654 390 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms