RNA–Protein interactions for RNA: ENST00000584049.5

BDNF-219, Transcript of brain derived neurotrophic factor, humanhuman

TSL 1 (best)

Gene BDNF, Length 4,030 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-219ENST00000584049 RNPEPQ9H4A4 650 aa8.9□□□□□ -0.98
BDNF-219ENST00000584049 ZNF385DQ9H6B1 395 aa8.9□□□□□ -0.98
BDNF-219ENST00000584049 PSAT1Q9Y617 370 aa8.9□□□□□ -0.98
BDNF-219ENST00000584049 SLCO1B7G3V0H7 640 aa8.9□□□□□ -0.99
BDNF-219ENST00000584049 TADA2AO75478 443 aa8.9□□□□□ -0.99
BDNF-219ENST00000584049 MGAT1P26572 445 aa8.9□□□□□ -0.99
BDNF-219ENST00000584049 THOP1P52888 689 aa8.9□□□□□ -0.99
BDNF-219ENST00000584049 TNFAIP2Q03169 654 aa8.9□□□□□ -0.99
BDNF-219ENST00000584049 DCTN2Q13561 401 aaKnown RBP8.9□□□□□ -0.99
BDNF-219ENST00000584049 PKDCCQ504Y2 493 aa8.9□□□□□ -0.99
BDNF-219ENST00000584049 PPP6R3Q5H9R7 873 aaPredicted RBP8.9□□□□□ -0.99
BDNF-219ENST00000584049 EEF1DP3Q658K8 133 aa8.9□□□□□ -0.99
BDNF-219ENST00000584049 ZNF410Q86VK4 478 aa8.9□□□□□ -0.99
BDNF-219ENST00000584049 SNX32Q86XE0 403 aa8.9□□□□□ -0.99
BDNF-219ENST00000584049 DIS3LQ8TF46 1054 aaKnown RBP8.9□□□□□ -0.99
BDNF-219ENST00000584049 SEPT1Q8WYJ6 367 aa8.9□□□□□ -0.99
BDNF-219ENST00000584049 KHSRPQ92945 711 aaKnown RBP eCLIP8.9□□□□□ -0.99
BDNF-219ENST00000584049 C11orf84Q9BUA3 381 aaPredicted RBP8.9□□□□□ -0.99
BDNF-219ENST00000584049 ILKAPQ9H0C8 392 aaPredicted RBP8.9□□□□□ -0.99
BDNF-219ENST00000584049 DTLQ9NZJ0 730 aa8.9□□□□□ -0.99
BDNF-219ENST00000584049 RAP2CQ9Y3L5 183 aa8.9□□□□□ -0.99
BDNF-219ENST00000584049 G3V2L1 256 aa8.89□□□□□ -0.99
BDNF-219ENST00000584049 MATN2O00339 956 aa8.89□□□□□ -0.99
BDNF-219ENST00000584049 HDAC3O15379 428 aa8.89□□□□□ -0.99
BDNF-219ENST00000584049 GRAP2O75791 330 aa8.89□□□□□ -0.99
BDNF-219ENST00000584049 ZMPSTE24O75844 475 aa8.89□□□□□ -0.99
BDNF-219ENST00000584049 MAP3K6O95382 1288 aa8.89□□□□□ -0.99
BDNF-219ENST00000584049 ME2P23368 584 aa8.89□□□□□ -0.99
BDNF-219ENST00000584049 NDST1P52848 882 aa8.89□□□□□ -0.99
BDNF-219ENST00000584049 PEX6Q13608 980 aa8.89□□□□□ -0.99
BDNF-219ENST00000584049 DPYSQ14117 519 aa8.89□□□□□ -0.99
BDNF-219ENST00000584049 KYAT1Q16773 422 aa8.89□□□□□ -0.99
BDNF-219ENST00000584049 CSPG4P5Q96PW8 444 aa8.89□□□□□ -0.99
BDNF-219ENST00000584049 GRIP2Q9C0E4 1043 aa8.89□□□□□ -0.99
BDNF-219ENST00000584049 DNAAF2Q9NVR5 837 aaKnown RBP8.89□□□□□ -0.99
BDNF-219ENST00000584049 HACD3Q9P035 362 aa8.89□□□□□ -0.99
BDNF-219ENST00000584049 SLC17A6Q9P2U8 582 aa8.89□□□□□ -0.99
BDNF-219ENST00000584049 VTI1BQ9UEU0 232 aa8.89□□□□□ -0.99
BDNF-219ENST00000584049 GNEQ9Y223 722 aaKnown RBP8.89□□□□□ -0.99
BDNF-219ENST00000584049 COL4A5P29400 1685 aa8.89□□□□□ -0.99
BDNF-219ENST00000584049 LACTBL1A8MY62 500 aa8.89□□□□□ -0.99
BDNF-219ENST00000584049 ADCY6O43306 1168 aa8.89□□□□□ -0.99
BDNF-219ENST00000584049 HNRNPRO43390 633 aaKnown RBP8.89□□□□□ -0.99
BDNF-219ENST00000584049 MCF2P10911 925 aa8.89□□□□□ -0.99
BDNF-219ENST00000584049 CDK4P11802 303 aa8.89□□□□□ -0.99
BDNF-219ENST00000584049 PPARGP37231 505 aaPredicted RBP8.89□□□□□ -0.99
BDNF-219ENST00000584049 MRPS22P82650 360 aaKnown RBP8.89□□□□□ -0.99
BDNF-219ENST00000584049 USP4Q13107 963 aa8.89□□□□□ -0.99
BDNF-219ENST00000584049 GOLGA7BQ2TAP0 167 aa8.89□□□□□ -0.99
BDNF-219ENST00000584049 PPM1JQ5JR12 505 aa8.89□□□□□ -0.99
BDNF-219ENST00000584049 MAP1SQ66K74 1059 aaPredicted RBP8.89□□□□□ -0.99
BDNF-219ENST00000584049 NCBP2-AS2Q69YL0 99 aa8.89□□□□□ -0.99
BDNF-219ENST00000584049 NUP93Q8N1F7 819 aa8.89□□□□□ -0.99
BDNF-219ENST00000584049 LRRC43Q8N309 656 aa8.89□□□□□ -0.99
BDNF-219ENST00000584049 DCLK2Q8N568 766 aa8.89□□□□□ -0.99
BDNF-219ENST00000584049 EFCAB3Q8N7B9 438 aa8.89□□□□□ -0.99
BDNF-219ENST00000584049 CNTD1Q8N815 330 aa8.89□□□□□ -0.99
BDNF-219ENST00000584049 COLGALT1Q8NBJ5 622 aa8.89□□□□□ -0.99
BDNF-219ENST00000584049 CHST13Q8NET6 341 aa8.89□□□□□ -0.99
BDNF-219ENST00000584049 MAPK15Q8TD08 544 aa8.89□□□□□ -0.99
BDNF-219ENST00000584049 HPDLQ96IR7 371 aa8.89□□□□□ -0.99
BDNF-219ENST00000584049 NFKBIZQ9BYH8 718 aa8.89□□□□□ -0.99
BDNF-219ENST00000584049 MRPL40Q9NQ50 206 aaKnown RBP8.89□□□□□ -0.99
BDNF-219ENST00000584049 AP4E1Q9UPM8 1137 aa8.89□□□□□ -0.99
BDNF-219ENST00000584049 SQORQ9Y6N5 450 aa8.89□□□□□ -0.99
BDNF-219ENST00000584049 GOLGA8QA0A0J9YX86 632 aa8.89□□□□□ -0.99
BDNF-219ENST00000584049 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP8.89□□□□□ -0.99
BDNF-219ENST00000584049 GOLGA8OA6NCC3 632 aa8.89□□□□□ -0.99
BDNF-219ENST00000584049 GOLGA8NF8WBI6 632 aa8.89□□□□□ -0.99
BDNF-219ENST00000584049 AIM2O14862 343 aa8.89□□□□□ -0.99
BDNF-219ENST00000584049 XRCC1P18887 633 aaPredicted RBP8.89□□□□□ -0.99
BDNF-219ENST00000584049 HADHAP40939 763 aa8.89□□□□□ -0.99
BDNF-219ENST00000584049 GLUD2P49448 558 aa8.89□□□□□ -0.99
BDNF-219ENST00000584049 CSE1LP55060 971 aaKnown RBP8.89□□□□□ -0.99
BDNF-219ENST00000584049 OSTNP61366 133 aa8.89□□□□□ -0.99
BDNF-219ENST00000584049 JADE1Q6IE81 842 aa8.89□□□□□ -0.99
BDNF-219ENST00000584049 KLHL23Q8NBE8 558 aa8.89□□□□□ -0.99
BDNF-219ENST00000584049 ZNF280CQ8ND82 737 aa8.89□□□□□ -0.99
BDNF-219ENST00000584049 PDCD6IPQ8WUM4 868 aaKnown RBP8.89□□□□□ -0.99
BDNF-219ENST00000584049 GAB3Q8WWW8 586 aa8.89□□□□□ -0.99
BDNF-219ENST00000584049 OR52B2Q96RD2 323 aa8.89□□□□□ -0.99
BDNF-219ENST00000584049 CDRT15Q96T59 188 aa8.89□□□□□ -0.99
BDNF-219ENST00000584049 DHX35Q9H5Z1 703 aaKnown RBP8.89□□□□□ -0.99
BDNF-219ENST00000584049 MRGBPQ9NV56 204 aa8.89□□□□□ -0.99
BDNF-219ENST00000584049 IGSF9Q9P2J2 1179 aa8.89□□□□□ -0.99
BDNF-219ENST00000584049 USP3Q9Y6I4 520 aa8.89□□□□□ -0.99
BDNF-219ENST00000584049 CCDC160A6NGH7 325 aa8.89□□□□□ -0.99
BDNF-219ENST00000584049 IRF6O14896 467 aa8.89□□□□□ -0.99
BDNF-219ENST00000584049 TGFB3P10600 412 aa8.89□□□□□ -0.99
BDNF-219ENST00000584049 DNAJB1P25685 340 aa8.89□□□□□ -0.99
BDNF-219ENST00000584049 SESN2P58004 480 aaPredicted RBP8.89□□□□□ -0.99
BDNF-219ENST00000584049 TXNL4AP83876 142 aaKnown RBP8.89□□□□□ -0.99
BDNF-219ENST00000584049 FAM187BQ17R55 369 aa8.89□□□□□ -0.99
BDNF-219ENST00000584049 METTL7BQ6UX53 244 aa8.89□□□□□ -0.99
BDNF-219ENST00000584049 NT5DC4Q86YG4 428 aa8.89□□□□□ -0.99
BDNF-219ENST00000584049 PSTKQ8IV42 348 aaKnown RBP8.89□□□□□ -0.99
BDNF-219ENST00000584049 TOP1MTQ969P6 601 aa8.89□□□□□ -0.99
BDNF-219ENST00000584049 CNBD2Q96M20 576 aa8.89□□□□□ -0.99
BDNF-219ENST00000584049 KCTD15Q96SI1 283 aaPredicted RBP8.89□□□□□ -0.99
BDNF-219ENST00000584049 PRPF18Q99633 342 aaKnown RBP8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms