RNA–Protein interactions for RNA: ENST00000583363.5

CDK5RAP3-228, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 558 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-228ENST00000583363 OTUB2Q96DC9 234 aa16.84■□□□□ 0.29
CDK5RAP3-228ENST00000583363 TMA16Q96EY4 203 aaKnown RBP16.84■□□□□ 0.29
CDK5RAP3-228ENST00000583363 ASIC4Q96FT7 647 aa16.84■□□□□ 0.29
CDK5RAP3-228ENST00000583363 RPRD1AQ96P16 312 aaPredicted RBP16.84■□□□□ 0.29
CDK5RAP3-228ENST00000583363 NAP1L3Q99457 506 aaPredicted RBP16.84■□□□□ 0.29
CDK5RAP3-228ENST00000583363 PLA2G2FQ9BZM2 168 aa16.84■□□□□ 0.29
CDK5RAP3-228ENST00000583363 ZYG11BQ9C0D3 744 aa16.84■□□□□ 0.29
CDK5RAP3-228ENST00000583363 RETREG1Q9H6L5 497 aa16.84■□□□□ 0.29
CDK5RAP3-228ENST00000583363 ETNK2Q9NVF9 386 aa16.84■□□□□ 0.29
CDK5RAP3-228ENST00000583363 SMARCAL1Q9NZC9 954 aa16.84■□□□□ 0.29
CDK5RAP3-228ENST00000583363 MPP6Q9NZW5 540 aa16.84■□□□□ 0.29
CDK5RAP3-228ENST00000583363 PGRMC1O00264 195 aaKnown RBP16.83■□□□□ 0.28
CDK5RAP3-228ENST00000583363 APOL1O14791 398 aa16.83■□□□□ 0.28
CDK5RAP3-228ENST00000583363 FGF10O15520 208 aaPredicted RBP16.83■□□□□ 0.28
CDK5RAP3-228ENST00000583363 ECI2O75521 394 aa16.83■□□□□ 0.28
CDK5RAP3-228ENST00000583363 CNTN5O94779 1100 aa16.83■□□□□ 0.28
CDK5RAP3-228ENST00000583363 RHOQP17081 205 aa16.83■□□□□ 0.28
CDK5RAP3-228ENST00000583363 IRAK1P51617 712 aa16.83■□□□□ 0.28
CDK5RAP3-228ENST00000583363 SGSHP51688 502 aa16.83■□□□□ 0.28
CDK5RAP3-228ENST00000583363 VCPP55072 806 aaKnown RBP16.83■□□□□ 0.28
CDK5RAP3-228ENST00000583363 SIX1Q15475 284 aaPredicted RBP16.83■□□□□ 0.28
CDK5RAP3-228ENST00000583363 WHAMMP3Q1A5X7 153 aa16.83■□□□□ 0.28
CDK5RAP3-228ENST00000583363 ALFQ53S48 1182 aa16.83■□□□□ 0.28
CDK5RAP3-228ENST00000583363 RABGAP1LQ5R372 815 aa16.83■□□□□ 0.28
CDK5RAP3-228ENST00000583363 VITQ6UXI7 678 aa16.83■□□□□ 0.28
CDK5RAP3-228ENST00000583363 DENND4AQ7Z401 1863 aa16.83■□□□□ 0.28
CDK5RAP3-228ENST00000583363 NLRP14Q86W24 1093 aa16.83■□□□□ 0.28
CDK5RAP3-228ENST00000583363 CFAP52Q8N1V2 620 aa16.83■□□□□ 0.28
CDK5RAP3-228ENST00000583363 PLD5Q8N7P1 536 aa16.83■□□□□ 0.28
CDK5RAP3-228ENST00000583363 TDRD5Q8NAT2 981 aaKnown RBP16.83■□□□□ 0.28
CDK5RAP3-228ENST00000583363 ST13P5Q8NFI4 369 aaPredicted RBP16.83■□□□□ 0.28
CDK5RAP3-228ENST00000583363 TRAF3IP1Q8TDR0 691 aaPredicted RBP16.83■□□□□ 0.28
CDK5RAP3-228ENST00000583363 OSCP1Q8WVF1 389 aa16.83■□□□□ 0.28
CDK5RAP3-228ENST00000583363 MAIP1Q8WWC4 291 aa16.83■□□□□ 0.28
CDK5RAP3-228ENST00000583363 PRICKLE1Q96MT3 831 aaPredicted RBP16.83■□□□□ 0.28
CDK5RAP3-228ENST00000583363 DUS2Q9NX74 493 aaKnown RBP16.83■□□□□ 0.28
CDK5RAP3-228ENST00000583363 ZNF212Q9UDV6 495 aa16.83■□□□□ 0.28
CDK5RAP3-228ENST00000583363 ANHXE9PGG2 379 aa16.82■□□□□ 0.28
CDK5RAP3-228ENST00000583363 CDH4P55283 916 aa16.82■□□□□ 0.28
CDK5RAP3-228ENST00000583363 RPS24P62847 133 aaKnown RBP16.82■□□□□ 0.28
CDK5RAP3-228ENST00000583363 FCHO2Q0JRZ9 810 aa16.82■□□□□ 0.28
CDK5RAP3-228ENST00000583363 PAFAH1B3Q15102 231 aaKnown RBP16.82■□□□□ 0.28
CDK5RAP3-228ENST00000583363 MPPE1Q53F39 396 aa16.82■□□□□ 0.28
CDK5RAP3-228ENST00000583363 CCDC181Q5TID7 509 aa16.82■□□□□ 0.28
CDK5RAP3-228ENST00000583363 NCBP2-AS2Q69YL0 99 aa16.82■□□□□ 0.28
CDK5RAP3-228ENST00000583363 MTSS1LQ765P7 747 aa16.82■□□□□ 0.28
CDK5RAP3-228ENST00000583363 ADAT2Q7Z6V5 191 aaKnown RBP16.82■□□□□ 0.28
CDK5RAP3-228ENST00000583363 RTL3Q8N8U3 475 aaKnown RBP16.82■□□□□ 0.28
CDK5RAP3-228ENST00000583363 FGF14Q92915 247 aa16.82■□□□□ 0.28
CDK5RAP3-228ENST00000583363 IRF7Q92985 503 aa16.82■□□□□ 0.28
CDK5RAP3-228ENST00000583363 P2RY11Q96G91 374 aa16.82■□□□□ 0.28
CDK5RAP3-228ENST00000583363 PRRX2Q99811 253 aa16.82■□□□□ 0.28
CDK5RAP3-228ENST00000583363 FAM83CQ9BQN1 747 aa16.82■□□□□ 0.28
CDK5RAP3-228ENST00000583363 RPP25Q9BUL9 199 aaKnown RBP16.82■□□□□ 0.28
CDK5RAP3-228ENST00000583363 KLC2Q9H0B6 622 aa16.82■□□□□ 0.28
CDK5RAP3-228ENST00000583363 L2HGDHQ9H9P8 463 aa16.82■□□□□ 0.28
CDK5RAP3-228ENST00000583363 TMEM248Q9NWD8 314 aa16.82■□□□□ 0.28
CDK5RAP3-228ENST00000583363 THG1LQ9NWX6 298 aaKnown RBP16.82■□□□□ 0.28
CDK5RAP3-228ENST00000583363 NR2E1Q9Y466 385 aa16.82■□□□□ 0.28
CDK5RAP3-228ENST00000583363 MFHAS1Q9Y4C4 1052 aa16.82■□□□□ 0.28
CDK5RAP3-228ENST00000583363 WNT6Q9Y6F9 365 aa16.82■□□□□ 0.28
CDK5RAP3-228ENST00000583363 C2CD4DB7Z1M9 353 aa16.81■□□□□ 0.28
CDK5RAP3-228ENST00000583363 TBL1XO60907 577 aa16.81■□□□□ 0.28
CDK5RAP3-228ENST00000583363 TGM2P21980 687 aa16.81■□□□□ 0.28
CDK5RAP3-228ENST00000583363 IFNAR2P48551 515 aa16.81■□□□□ 0.28
CDK5RAP3-228ENST00000583363 DYNLT1P63172 113 aa16.81■□□□□ 0.28
CDK5RAP3-228ENST00000583363 EML3Q32P44 896 aa16.81■□□□□ 0.28
CDK5RAP3-228ENST00000583363 MPP7Q5T2T1 576 aa16.81■□□□□ 0.28
CDK5RAP3-228ENST00000583363 TTC39BQ5VTQ0 682 aaPredicted RBP16.81■□□□□ 0.28
CDK5RAP3-228ENST00000583363 C1orf228Q6PIY5 440 aa16.81■□□□□ 0.28
CDK5RAP3-228ENST00000583363 RHBDF2Q6PJF5 856 aa16.81■□□□□ 0.28
CDK5RAP3-228ENST00000583363 TMCO3Q6UWJ1 677 aa16.81■□□□□ 0.28
CDK5RAP3-228ENST00000583363 CHST9Q7L1S5 443 aa16.81■□□□□ 0.28
CDK5RAP3-228ENST00000583363 TMEM25Q86YD3 366 aa16.81■□□□□ 0.28
CDK5RAP3-228ENST00000583363 PLCD3Q8N3E9 789 aa16.81■□□□□ 0.28
CDK5RAP3-228ENST00000583363 HJURPQ8NCD3 748 aaPredicted RBP16.81■□□□□ 0.28
CDK5RAP3-228ENST00000583363 DEPDC1BQ8WUY9 529 aa16.81■□□□□ 0.28
CDK5RAP3-228ENST00000583363 KXD1Q9BQD3 176 aa16.81■□□□□ 0.28
CDK5RAP3-228ENST00000583363 SPHK2Q9NRA0 654 aa16.81■□□□□ 0.28
CDK5RAP3-228ENST00000583363 DONSONQ9NYP3 566 aa16.81■□□□□ 0.28
CDK5RAP3-228ENST00000583363 CACNA1HO95180 2353 aa16.8■□□□□ 0.28
CDK5RAP3-228ENST00000583363 APOC4-APOC2K7ER74 178 aa16.8■□□□□ 0.28
CDK5RAP3-228ENST00000583363 KRIT1O00522 736 aa16.8■□□□□ 0.28
CDK5RAP3-228ENST00000583363 CLDN11O75508 207 aa16.8■□□□□ 0.28
CDK5RAP3-228ENST00000583363 APOC2P02655 101 aa16.8■□□□□ 0.28
CDK5RAP3-228ENST00000583363 PSMC3P17980 439 aa16.8■□□□□ 0.28
CDK5RAP3-228ENST00000583363 SP100P23497 879 aaPredicted RBP16.8■□□□□ 0.28
CDK5RAP3-228ENST00000583363 NR2C2P49116 596 aa16.8■□□□□ 0.28
CDK5RAP3-228ENST00000583363 CKAP4Q07065 602 aaKnown RBP16.8■□□□□ 0.28
CDK5RAP3-228ENST00000583363 SLC10A2Q12908 348 aaPredicted RBP16.8■□□□□ 0.28
CDK5RAP3-228ENST00000583363 HTR4Q13639 388 aa16.8■□□□□ 0.28
CDK5RAP3-228ENST00000583363 PDGFRLQ15198 375 aa16.8■□□□□ 0.28
CDK5RAP3-228ENST00000583363 FYB2Q5VWT5 728 aa16.8■□□□□ 0.28
CDK5RAP3-228ENST00000583363 RNF43Q68DV7 783 aa16.8■□□□□ 0.28
CDK5RAP3-228ENST00000583363 NPNTQ6UXI9 565 aa16.8■□□□□ 0.28
CDK5RAP3-228ENST00000583363 TPGS1Q6ZTW0 290 aa16.8■□□□□ 0.28
CDK5RAP3-228ENST00000583363 ZNF572Q7Z3I7 529 aaPredicted RBP16.8■□□□□ 0.28
CDK5RAP3-228ENST00000583363 CIR1Q86X95 450 aaPredicted RBP16.8■□□□□ 0.28
CDK5RAP3-228ENST00000583363 LZTR1Q8N653 840 aa16.8■□□□□ 0.28
CDK5RAP3-228ENST00000583363 TTC13Q8NBP0 860 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms