RNA–Protein interactions for RNA: ENST00000583328.5

TOP3A-215, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 727 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-215ENST00000583328 IRX2Q9BZI1 471 aaPredicted RBP12.76□□□□□ -0.37
TOP3A-215ENST00000583328 CLMPQ9H6B4 373 aa12.76□□□□□ -0.37
TOP3A-215ENST00000583328 TMEM8AQ9HCN3 771 aa12.76□□□□□ -0.37
TOP3A-215ENST00000583328 CISHQ9NSE2 258 aa12.76□□□□□ -0.37
TOP3A-215ENST00000583328 ABCC13Q9NSE7 274 aa12.76□□□□□ -0.37
TOP3A-215ENST00000583328 EDDM13A0A1B0GTR0 161 aa12.75□□□□□ -0.37
TOP3A-215ENST00000583328 A0A1W2PQ27 194 aa12.75□□□□□ -0.37
TOP3A-215ENST00000583328 A0A1W2PQ64 194 aa12.75□□□□□ -0.37
TOP3A-215ENST00000583328 TYW5A2RUC4 315 aaKnown RBP12.75□□□□□ -0.37
TOP3A-215ENST00000583328 YJEFN3A6XGL0 299 aa12.75□□□□□ -0.37
TOP3A-215ENST00000583328 E7ENQ6 273 aa12.75□□□□□ -0.37
TOP3A-215ENST00000583328 XPO1O14980 1071 aaKnown RBP12.75□□□□□ -0.37
TOP3A-215ENST00000583328 MAPK13O15264 365 aa12.75□□□□□ -0.37
TOP3A-215ENST00000583328 SIGLEC6O43699 453 aa12.75□□□□□ -0.37
TOP3A-215ENST00000583328 ACSL4O60488 711 aa12.75□□□□□ -0.37
TOP3A-215ENST00000583328 SDC3O75056 442 aa12.75□□□□□ -0.37
TOP3A-215ENST00000583328 ADH1BP00325 375 aa12.75□□□□□ -0.37
TOP3A-215ENST00000583328 COL5A1P20908 1838 aaPredicted RBP12.75□□□□□ -0.37
TOP3A-215ENST00000583328 C5AR1P21730 350 aa12.75□□□□□ -0.37
TOP3A-215ENST00000583328 CMA1P23946 247 aa12.75□□□□□ -0.37
TOP3A-215ENST00000583328 SLC6A4P31645 630 aa12.75□□□□□ -0.37
TOP3A-215ENST00000583328 ADPRHP54922 357 aa12.75□□□□□ -0.37
TOP3A-215ENST00000583328 KCNC4Q03721 635 aa12.75□□□□□ -0.37
TOP3A-215ENST00000583328 ADIGQ0VDE8 80 aa12.75□□□□□ -0.37
TOP3A-215ENST00000583328 ARID5BQ14865 1188 aa12.75□□□□□ -0.37
TOP3A-215ENST00000583328 PROX2Q3B8N5 592 aa12.75□□□□□ -0.37
TOP3A-215ENST00000583328 PKDCCQ504Y2 493 aa12.75□□□□□ -0.37
TOP3A-215ENST00000583328 HS1BP3Q53T59 392 aa12.75□□□□□ -0.37
TOP3A-215ENST00000583328 NAPEPLDQ6IQ20 393 aa12.75□□□□□ -0.37
TOP3A-215ENST00000583328 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.75□□□□□ -0.37
TOP3A-215ENST00000583328 KANSL1Q7Z3B3 1105 aa12.75□□□□□ -0.37
TOP3A-215ENST00000583328 SIX6OS1Q8N1H7 587 aa12.75□□□□□ -0.37
TOP3A-215ENST00000583328 STK40Q8N2I9 435 aa12.75□□□□□ -0.37
TOP3A-215ENST00000583328 AADATQ8N5Z0 425 aa12.75□□□□□ -0.37
TOP3A-215ENST00000583328 KDM1BQ8NB78 822 aa12.75□□□□□ -0.37
TOP3A-215ENST00000583328 HJURPQ8NCD3 748 aaPredicted RBP12.75□□□□□ -0.37
TOP3A-215ENST00000583328 TATDN2Q93075 761 aa12.75□□□□□ -0.37
TOP3A-215ENST00000583328 FAXDC2Q96IV6 333 aa12.75□□□□□ -0.37
TOP3A-215ENST00000583328 LMLNQ96KR4 655 aa12.75□□□□□ -0.37
TOP3A-215ENST00000583328 MRGPRX3Q96LB0 322 aa12.75□□□□□ -0.37
TOP3A-215ENST00000583328 DDX50Q9BQ39 737 aaKnown RBP12.75□□□□□ -0.37
TOP3A-215ENST00000583328 CPNE5Q9HCH3 593 aa12.75□□□□□ -0.37
TOP3A-215ENST00000583328 HESX1Q9UBX0 185 aa12.75□□□□□ -0.37
TOP3A-215ENST00000583328 SERTAD1Q9UHV2 236 aa12.75□□□□□ -0.37
TOP3A-215ENST00000583328 TSPAN16Q9UKR8 245 aa12.75□□□□□ -0.37
TOP3A-215ENST00000583328 INTS6Q9UL03 887 aaKnown RBP12.75□□□□□ -0.37
TOP3A-215ENST00000583328 ERVW-1Q9UQF0 538 aa12.75□□□□□ -0.37
TOP3A-215ENST00000583328 CEP83Q9Y592 693 aa12.75□□□□□ -0.37
TOP3A-215ENST00000583328 PCDHB1Q9Y5F3 818 aa12.75□□□□□ -0.37
TOP3A-215ENST00000583328 KALRNO60229 2985 aa12.75□□□□□ -0.37
TOP3A-215ENST00000583328 MUC22E2RYF6 1773 aaPredicted RBP12.74□□□□□ -0.37
TOP3A-215ENST00000583328 B8ZZF3 427 aa12.74□□□□□ -0.37
TOP3A-215ENST00000583328 PYCARD-AS1I3L0S3 204 aa12.74□□□□□ -0.37
TOP3A-215ENST00000583328 TRIM38O00635 465 aa12.74□□□□□ -0.37
TOP3A-215ENST00000583328 ARHGAP6O43182 974 aa12.74□□□□□ -0.37
TOP3A-215ENST00000583328 MOCS3O95396 460 aa12.74□□□□□ -0.37
TOP3A-215ENST00000583328 IL1BP01584 269 aa12.74□□□□□ -0.37
TOP3A-215ENST00000583328 MPOP05164 745 aa12.74□□□□□ -0.37
TOP3A-215ENST00000583328 SRPRAP08240 638 aaKnown RBP12.74□□□□□ -0.37
TOP3A-215ENST00000583328 LCP1P13796 627 aa12.74□□□□□ -0.37
TOP3A-215ENST00000583328 NR2F2P24468 414 aa12.74□□□□□ -0.37
TOP3A-215ENST00000583328 MAT2AP31153 395 aaKnown RBP12.74□□□□□ -0.37
TOP3A-215ENST00000583328 CTSOP43234 321 aaPredicted RBP12.74□□□□□ -0.37
TOP3A-215ENST00000583328 TBX4P57082 545 aa12.74□□□□□ -0.37
TOP3A-215ENST00000583328 PPP2CBP62714 309 aa12.74□□□□□ -0.37
TOP3A-215ENST00000583328 PPP2CAP67775 309 aa12.74□□□□□ -0.37
TOP3A-215ENST00000583328 BST2Q10589 180 aaKnown RBP12.74□□□□□ -0.37
TOP3A-215ENST00000583328 ZNF211Q13398 564 aaPredicted RBP12.74□□□□□ -0.37
TOP3A-215ENST00000583328 CDH18Q13634 790 aa12.74□□□□□ -0.37
TOP3A-215ENST00000583328 LY6DQ14210 128 aa12.74□□□□□ -0.37
TOP3A-215ENST00000583328 STAT4Q14765 748 aa12.74□□□□□ -0.37
TOP3A-215ENST00000583328 FAM133BQ5BKY9 247 aaKnown RBP12.74□□□□□ -0.37
TOP3A-215ENST00000583328 RNF219Q5W0B1 726 aaPredicted RBP12.74□□□□□ -0.37
TOP3A-215ENST00000583328 NUGGCQ68CJ6 796 aa12.74□□□□□ -0.37
TOP3A-215ENST00000583328 KRT39Q6A163 491 aa12.74□□□□□ -0.37
TOP3A-215ENST00000583328 IQCHQ86VS3 1027 aa12.74□□□□□ -0.37
TOP3A-215ENST00000583328 FAM186BQ8IYM0 893 aa12.74□□□□□ -0.37
TOP3A-215ENST00000583328 LSMEM2Q8N112 164 aa12.74□□□□□ -0.37
TOP3A-215ENST00000583328 FAM181AQ8N9Y4 354 aa12.74□□□□□ -0.37
TOP3A-215ENST00000583328 UBA3Q8TBC4 463 aa12.74□□□□□ -0.37
TOP3A-215ENST00000583328 SEMA4DQ92854 862 aa12.74□□□□□ -0.37
TOP3A-215ENST00000583328 SEMA4CQ9C0C4 833 aa12.74□□□□□ -0.37
TOP3A-215ENST00000583328 SLCO3A1Q9UIG8 710 aa12.74□□□□□ -0.37
TOP3A-215ENST00000583328 TRAF3IP3Q9Y228 551 aa12.74□□□□□ -0.37
TOP3A-215ENST00000583328 MAST4O15021 2626 aa12.73□□□□□ -0.37
TOP3A-215ENST00000583328 FAM237AA0A1B0GTK4 181 aa12.73□□□□□ -0.37
TOP3A-215ENST00000583328 GOLGA6L4A6NEF3 574 aa12.73□□□□□ -0.37
TOP3A-215ENST00000583328 C10orf142B7Z368 130 aa12.73□□□□□ -0.37
TOP3A-215ENST00000583328 KLK10O43240 276 aa12.73□□□□□ -0.37
TOP3A-215ENST00000583328 LATO43561 262 aa12.73□□□□□ -0.37
TOP3A-215ENST00000583328 C6P13671 934 aa12.73□□□□□ -0.37
TOP3A-215ENST00000583328 CD19P15391 556 aa12.73□□□□□ -0.37
TOP3A-215ENST00000583328 GTF2H1P32780 548 aa12.73□□□□□ -0.37
TOP3A-215ENST00000583328 PSMC2P35998 433 aaKnown RBP12.73□□□□□ -0.37
TOP3A-215ENST00000583328 RPS24P62847 133 aaKnown RBP12.73□□□□□ -0.37
TOP3A-215ENST00000583328 GABREP78334 506 aa12.73□□□□□ -0.37
TOP3A-215ENST00000583328 ECT2LQ008S8 904 aa12.73□□□□□ -0.37
TOP3A-215ENST00000583328 OVGP1Q12889 678 aa12.73□□□□□ -0.37
TOP3A-215ENST00000583328 SGO2Q562F6 1265 aa12.73□□□□□ -0.37
TOP3A-215ENST00000583328 PITRM1Q5JRX3 1037 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms