RNA–Protein interactions for RNA: ENST00000583320.5

SNX11-212, Transcript of sorting nexin 11, humanhuman

TSL 3

Gene SNX11, Length 965 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11-212ENST00000583320 HMGB4Q8WW32 186 aa18.56■□□□□ 0.56
SNX11-212ENST00000583320 SPACA7Q96KW9 195 aa18.56■□□□□ 0.56
SNX11-212ENST00000583320 CDC23Q9UJX2 597 aa18.56■□□□□ 0.56
SNX11-212ENST00000583320 SNX12Q9UMY4 172 aa18.56■□□□□ 0.56
SNX11-212ENST00000583320 HYOU1Q9Y4L1 999 aa18.56■□□□□ 0.56
SNX11-212ENST00000583320 ALG6Q9Y672 507 aa18.56■□□□□ 0.56
SNX11-212ENST00000583320 SAR1BQ9Y6B6 198 aa18.56■□□□□ 0.56
SNX11-212ENST00000583320 FAM170AA1A519 330 aa18.55■□□□□ 0.56
SNX11-212ENST00000583320 TULP2O00295 520 aa18.55■□□□□ 0.56
SNX11-212ENST00000583320 CLDN5O00501 218 aa18.55■□□□□ 0.56
SNX11-212ENST00000583320 CES2O00748 559 aa18.55■□□□□ 0.56
SNX11-212ENST00000583320 ALDH1A2O94788 518 aa18.55■□□□□ 0.56
SNX11-212ENST00000583320 PROSCO94903 275 aa18.55■□□□□ 0.56
SNX11-212ENST00000583320 NFATC1O95644 943 aa18.55■□□□□ 0.56
SNX11-212ENST00000583320 RGS7P49802 495 aa18.55■□□□□ 0.56
SNX11-212ENST00000583320 MRPS21P82921 87 aaKnown RBP18.55■□□□□ 0.56
SNX11-212ENST00000583320 NR1H3Q13133 447 aa18.55■□□□□ 0.56
SNX11-212ENST00000583320 MESDQ14696 234 aa18.55■□□□□ 0.56
SNX11-212ENST00000583320 RPS6KA1Q15418 735 aa18.55■□□□□ 0.56
SNX11-212ENST00000583320 ZNF423Q2M1K9 1284 aa18.55■□□□□ 0.56
SNX11-212ENST00000583320 CFAP221Q4G0U5 840 aa18.55■□□□□ 0.56
SNX11-212ENST00000583320 SPATA2LQ8IUW3 424 aaPredicted RBP18.55■□□□□ 0.56
SNX11-212ENST00000583320 HDDC3Q8N4P3 179 aa18.55■□□□□ 0.56
SNX11-212ENST00000583320 PNPLA1Q8N8W4 532 aa18.55■□□□□ 0.56
SNX11-212ENST00000583320 CCDC26Q8TAB7 109 aa18.55■□□□□ 0.56
SNX11-212ENST00000583320 SMOQ99835 787 aa18.55■□□□□ 0.56
SNX11-212ENST00000583320 DMAP1Q9NPF5 467 aaPredicted RBP18.55■□□□□ 0.56
SNX11-212ENST00000583320 BCCIPQ9P287 314 aaKnown RBP eCLIP18.55■□□□□ 0.56
SNX11-212ENST00000583320 UXTQ9UBK9 157 aaPredicted RBP18.55■□□□□ 0.56
SNX11-212ENST00000583320 TJP2Q9UDY2 1190 aa18.55■□□□□ 0.56
SNX11-212ENST00000583320 SLC6A14Q9UN76 642 aa18.55■□□□□ 0.56
SNX11-212ENST00000583320 ARHGAP26Q9UNA1 814 aa18.55■□□□□ 0.56
SNX11-212ENST00000583320 MYOFQ9NZM1 2061 aa18.54■□□□□ 0.56
SNX11-212ENST00000583320 ENC1O14682 589 aa18.54■□□□□ 0.56
SNX11-212ENST00000583320 PAPSS1O43252 624 aaPredicted RBP18.54■□□□□ 0.56
SNX11-212ENST00000583320 OPHN1O60890 802 aa18.54■□□□□ 0.56
SNX11-212ENST00000583320 GABBR2O75899 941 aa18.54■□□□□ 0.56
SNX11-212ENST00000583320 FBXO21O94952 628 aa18.54■□□□□ 0.56
SNX11-212ENST00000583320 FTCDO95954 541 aa18.54■□□□□ 0.56
SNX11-212ENST00000583320 TCF3P15923 654 aa18.54■□□□□ 0.56
SNX11-212ENST00000583320 MAGEA11P43364 429 aa18.54■□□□□ 0.56
SNX11-212ENST00000583320 KIR2DL1P43626 348 aaPredicted RBP18.54■□□□□ 0.56
SNX11-212ENST00000583320 ATXN3P54252 364 aaPredicted RBP18.54■□□□□ 0.56
SNX11-212ENST00000583320 SLC6A3Q01959 620 aa18.54■□□□□ 0.56
SNX11-212ENST00000583320 PIGHQ14442 188 aaPredicted RBP18.54■□□□□ 0.56
SNX11-212ENST00000583320 RAB41Q5JT25 222 aa18.54■□□□□ 0.56
SNX11-212ENST00000583320 OR6B2Q6IFH4 312 aa18.54■□□□□ 0.56
SNX11-212ENST00000583320 OLFML1Q6UWY5 402 aa18.54■□□□□ 0.56
SNX11-212ENST00000583320 VSTM1Q6UX27 236 aa18.54■□□□□ 0.56
SNX11-212ENST00000583320 FAM183BPQ6ZVS7 135 aa18.54■□□□□ 0.56
SNX11-212ENST00000583320 SCML4Q8N228 414 aa18.54■□□□□ 0.56
SNX11-212ENST00000583320 NIPA2Q8N8Q9 360 aa18.54■□□□□ 0.56
SNX11-212ENST00000583320 MDM1Q8TC05 714 aa18.54■□□□□ 0.56
SNX11-212ENST00000583320 HES6Q96HZ4 224 aa18.54■□□□□ 0.56
SNX11-212ENST00000583320 LRRC4Q9HBW1 653 aa18.54■□□□□ 0.56
SNX11-212ENST00000583320 CHORDC1Q9UHD1 332 aaPredicted RBP18.54■□□□□ 0.56
SNX11-212ENST00000583320 RAXQ9Y2V3 346 aa18.54■□□□□ 0.56
SNX11-212ENST00000583320 MRFAP1Q9Y605 127 aa18.54■□□□□ 0.56
SNX11-212ENST00000583320 TCRBV21S2A2A0A5A6 115 aa18.53■□□□□ 0.56
SNX11-212ENST00000583320 GOLGA8SH3BPF8 625 aa18.53■□□□□ 0.56
SNX11-212ENST00000583320 LEFTY2O00292 366 aa18.53■□□□□ 0.56
SNX11-212ENST00000583320 SART1O43290 800 aaKnown RBP18.53■□□□□ 0.56
SNX11-212ENST00000583320 SH3BP5O60239 455 aa18.53■□□□□ 0.56
SNX11-212ENST00000583320 GLI1P08151 1106 aa18.53■□□□□ 0.56
SNX11-212ENST00000583320 SERPINF2P08697 491 aa18.53■□□□□ 0.56
SNX11-212ENST00000583320 CTNNA2P26232 953 aa18.53■□□□□ 0.56
SNX11-212ENST00000583320 MAP3K7CLP57077 242 aa18.53■□□□□ 0.56
SNX11-212ENST00000583320 WHAMMP3Q1A5X7 153 aa18.53■□□□□ 0.56
SNX11-212ENST00000583320 DUOXA1Q1HG43 343 aa18.53■□□□□ 0.56
SNX11-212ENST00000583320 FAM102AQ5T9C2 384 aaPredicted RBP18.53■□□□□ 0.56
SNX11-212ENST00000583320 SLC26A9Q7LBE3 791 aa18.53■□□□□ 0.56
SNX11-212ENST00000583320 PHLDB2Q86SQ0 1253 aa18.53■□□□□ 0.56
SNX11-212ENST00000583320 ZMIZ2Q8NF64 920 aa18.53■□□□□ 0.56
SNX11-212ENST00000583320 HNRNPLLQ8WVV9 542 aaKnown RBP18.53■□□□□ 0.56
SNX11-212ENST00000583320 MCEEQ96PE7 176 aa18.53■□□□□ 0.56
SNX11-212ENST00000583320 CNGB3Q9NQW8 809 aa18.53■□□□□ 0.56
SNX11-212ENST00000583320 ASNSD1Q9NWL6 643 aa18.53■□□□□ 0.56
SNX11-212ENST00000583320 RNF14Q9UBS8 474 aa18.53■□□□□ 0.56
SNX11-212ENST00000583320 TMEM59LQ9UK28 342 aa18.53■□□□□ 0.56
SNX11-212ENST00000583320 ASXL3Q9C0F0 2248 aa18.53■□□□□ 0.56
SNX11-212ENST00000583320 MYO18AQ92614 2054 aaKnown RBP18.53■□□□□ 0.56
SNX11-212ENST00000583320 HHLA1C9JL84 531 aa18.52■□□□□ 0.56
SNX11-212ENST00000583320 BEST1O76090 585 aa18.52■□□□□ 0.56
SNX11-212ENST00000583320 KAT7O95251 611 aa18.52■□□□□ 0.56
SNX11-212ENST00000583320 FTH1P19P0C7X4 201 aa18.52■□□□□ 0.56
SNX11-212ENST00000583320 HDCP19113 662 aa18.52■□□□□ 0.56
SNX11-212ENST00000583320 COMTP21964 271 aa18.52■□□□□ 0.56
SNX11-212ENST00000583320 BDNFP23560 247 aa18.52■□□□□ 0.56
SNX11-212ENST00000583320 HOXD12P35452 270 aa18.52■□□□□ 0.56
SNX11-212ENST00000583320 RPL7AP62424 266 aaKnown RBP18.52■□□□□ 0.56
SNX11-212ENST00000583320 RPL10AP62906 217 aaKnown RBP18.52■□□□□ 0.56
SNX11-212ENST00000583320 RPL6Q02878 288 aaKnown RBP18.52■□□□□ 0.56
SNX11-212ENST00000583320 KDSRQ06136 332 aa18.52■□□□□ 0.56
SNX11-212ENST00000583320 EFHC1Q5JVL4 640 aa18.52■□□□□ 0.56
SNX11-212ENST00000583320 SPDYCQ5MJ68 293 aa18.52■□□□□ 0.56
SNX11-212ENST00000583320 CCNI2Q6ZMN8 369 aaPredicted RBP18.52■□□□□ 0.56
SNX11-212ENST00000583320 ADAMTS14Q8WXS8 1223 aa18.52■□□□□ 0.56
SNX11-212ENST00000583320 PBKQ96KB5 322 aa18.52■□□□□ 0.56
SNX11-212ENST00000583320 OSBPL9Q96SU4 736 aa18.52■□□□□ 0.56
SNX11-212ENST00000583320 GOLPH3Q9H4A6 298 aa18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms