RNA–Protein interactions for RNA: ENST00000583160.5

COPS3-217, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 365 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-217ENST00000583160 NTPCRQ9BSD7 190 aaKnown RBP4.52□□□□□ -1.69
COPS3-217ENST00000583160 MAP6D1Q9H9H5 199 aa4.52□□□□□ -1.69
COPS3-217ENST00000583160 NFU1Q9UMS0 254 aa4.52□□□□□ -1.69
COPS3-217ENST00000583160 ZBTB1Q9Y2K1 713 aa4.52□□□□□ -1.69
COPS3-217ENST00000583160 CYP3A7-CYP3A51PA0A087WV96 503 aa4.51□□□□□ -1.69
COPS3-217ENST00000583160 TBC1D3DA0A087WVF3 549 aa4.51□□□□□ -1.69
COPS3-217ENST00000583160 TBC1D3IA0A087WXS9 549 aa4.51□□□□□ -1.69
COPS3-217ENST00000583160 TBC1D3EA0A087X179 549 aa4.51□□□□□ -1.69
COPS3-217ENST00000583160 TBC1D3KA0A087X1G2 549 aa4.51□□□□□ -1.69
COPS3-217ENST00000583160 TBC1D3BA6NDS4 549 aa4.51□□□□□ -1.69
COPS3-217ENST00000583160 TBC1D3FA6NER0 549 aaPredicted RBP4.51□□□□□ -1.69
COPS3-217ENST00000583160 KIF28PB7ZC32 967 aa4.51□□□□□ -1.69
COPS3-217ENST00000583160 TBC1D3LB9A6J9 549 aa4.51□□□□□ -1.69
COPS3-217ENST00000583160 MSI1O43347 362 aaKnown RBP4.51□□□□□ -1.69
COPS3-217ENST00000583160 SLC28A2O43868 658 aa4.51□□□□□ -1.69
COPS3-217ENST00000583160 NEURL1O76050 574 aa4.51□□□□□ -1.69
COPS3-217ENST00000583160 TBC1D3HP0C7X1 549 aa4.51□□□□□ -1.69
COPS3-217ENST00000583160 CYP3A7P24462 503 aa4.51□□□□□ -1.69
COPS3-217ENST00000583160 FAM3BP58499 235 aaPredicted RBP4.51□□□□□ -1.69
COPS3-217ENST00000583160 RBM6P78332 1123 aaKnown RBP4.51□□□□□ -1.69
COPS3-217ENST00000583160 ZXDBP98169 803 aa4.51□□□□□ -1.69
COPS3-217ENST00000583160 GALNT3Q14435 633 aa4.51□□□□□ -1.69
COPS3-217ENST00000583160 ZNF585BQ52M93 769 aa4.51□□□□□ -1.69
COPS3-217ENST00000583160 TBC1D3GQ6DHY5 549 aa4.51□□□□□ -1.69
COPS3-217ENST00000583160 TBC1D3CQ6IPX1 549 aa4.51□□□□□ -1.69
COPS3-217ENST00000583160 MDGA2Q7Z553 956 aa4.51□□□□□ -1.69
COPS3-217ENST00000583160 SRLQ86TD4 932 aa4.51□□□□□ -1.69
COPS3-217ENST00000583160 TBC1D3Q8IZP1 549 aaPredicted RBP4.51□□□□□ -1.69
COPS3-217ENST00000583160 FBXL14Q8N1E6 418 aa4.51□□□□□ -1.69
COPS3-217ENST00000583160 IP6K1Q92551 441 aa4.51□□□□□ -1.69
COPS3-217ENST00000583160 SGCZQ96LD1 299 aa4.51□□□□□ -1.69
COPS3-217ENST00000583160 MECRQ9BV79 373 aa4.51□□□□□ -1.69
COPS3-217ENST00000583160 SF3B5Q9BWJ5 86 aaKnown RBP4.51□□□□□ -1.69
COPS3-217ENST00000583160 KRTAP2-2Q9BYT5 123 aa4.51□□□□□ -1.69
COPS3-217ENST00000583160 ARHGAP39Q9C0H5 1083 aa4.51□□□□□ -1.69
COPS3-217ENST00000583160 ISCUQ9H1K1 167 aa4.51□□□□□ -1.69
COPS3-217ENST00000583160 SIRT3Q9NTG7 399 aaPredicted RBP4.51□□□□□ -1.69
COPS3-217ENST00000583160 PCDHA7Q9UN72 937 aa4.51□□□□□ -1.69
COPS3-217ENST00000583160 TCF20Q9UGU0 1960 aaKnown RBP4.51□□□□□ -1.69
COPS3-217ENST00000583160 C4orf47A7E2U8 309 aa4.5□□□□□ -1.69
COPS3-217ENST00000583160 KCNJ18B7U540 433 aa4.5□□□□□ -1.69
COPS3-217ENST00000583160 PRR23D1E9PI22 279 aaPredicted RBP4.5□□□□□ -1.69
COPS3-217ENST00000583160 MYL1P05976 194 aa4.5□□□□□ -1.69
COPS3-217ENST00000583160 PRR23D2P0DMB1 279 aaPredicted RBP4.5□□□□□ -1.69
COPS3-217ENST00000583160 HOXA11P31270 313 aaPredicted RBP4.5□□□□□ -1.69
COPS3-217ENST00000583160 MLH1P40692 756 aa4.5□□□□□ -1.69
COPS3-217ENST00000583160 ADPRHP54922 357 aa4.5□□□□□ -1.69
COPS3-217ENST00000583160 RNASELQ05823 741 aaKnown RBP4.5□□□□□ -1.69
COPS3-217ENST00000583160 ENTPD8Q5MY95 495 aa4.5□□□□□ -1.69
COPS3-217ENST00000583160 Q5PR19 223 aa4.5□□□□□ -1.69
COPS3-217ENST00000583160 ERAP2Q6P179 960 aa4.5□□□□□ -1.69
COPS3-217ENST00000583160 PARM1Q6UWI2 310 aa4.5□□□□□ -1.69
COPS3-217ENST00000583160 KDELC2Q7Z4H8 507 aa4.5□□□□□ -1.69
COPS3-217ENST00000583160 ADHFE1Q8IWW8 467 aa4.5□□□□□ -1.69
COPS3-217ENST00000583160 FAM186BQ8IYM0 893 aa4.5□□□□□ -1.69
COPS3-217ENST00000583160 DEPTORQ8TB45 409 aa4.5□□□□□ -1.69
COPS3-217ENST00000583160 CLEC4CQ8WTT0 213 aa4.5□□□□□ -1.69
COPS3-217ENST00000583160 MIB2Q96AX9 1013 aa4.5□□□□□ -1.69
COPS3-217ENST00000583160 CTAGE1Q96RT6 745 aa4.5□□□□□ -1.69
COPS3-217ENST00000583160 TP63Q9H3D4 680 aaPredicted RBP4.5□□□□□ -1.69
COPS3-217ENST00000583160 ARNT2Q9HBZ2 717 aa4.5□□□□□ -1.69
COPS3-217ENST00000583160 TBC1D14Q9P2M4 693 aa4.5□□□□□ -1.69
COPS3-217ENST00000583160 FBXO4Q9UKT5 387 aa4.5□□□□□ -1.69
COPS3-217ENST00000583160 INSL5Q9Y5Q6 135 aa4.5□□□□□ -1.69
COPS3-217ENST00000583160 GAGE12JA6NER3 117 aa4.49□□□□□ -1.69
COPS3-217ENST00000583160 AQP12BA6NM10 295 aa4.49□□□□□ -1.69
COPS3-217ENST00000583160 ASNA1O43681 348 aa4.49□□□□□ -1.69
COPS3-217ENST00000583160 KLKB1P03952 638 aa4.49□□□□□ -1.69
COPS3-217ENST00000583160 LCKP06239 509 aa4.49□□□□□ -1.69
COPS3-217ENST00000583160 PLA2G2AP14555 144 aa4.49□□□□□ -1.69
COPS3-217ENST00000583160 KCNJ4P48050 445 aa4.49□□□□□ -1.69
COPS3-217ENST00000583160 RFX2P48378 723 aa4.49□□□□□ -1.69
COPS3-217ENST00000583160 SF3A3Q12874 501 aaKnown RBP eCLIP4.49□□□□□ -1.69
COPS3-217ENST00000583160 HSP90AB2PQ58FF8 381 aa4.49□□□□□ -1.69
COPS3-217ENST00000583160 ALG10Q5BKT4 473 aa4.49□□□□□ -1.69
COPS3-217ENST00000583160 ARL13AQ5H913 290 aaPredicted RBP4.49□□□□□ -1.69
COPS3-217ENST00000583160 ALG10BQ5I7T1 473 aa4.49□□□□□ -1.69
COPS3-217ENST00000583160 PDXDC1Q6P996 788 aa4.49□□□□□ -1.69
COPS3-217ENST00000583160 RTL10Q7L3V2 364 aa4.49□□□□□ -1.69
COPS3-217ENST00000583160 ARHGAP30Q7Z6I6 1101 aaPredicted RBP4.49□□□□□ -1.69
COPS3-217ENST00000583160 CTU1Q7Z7A3 348 aaKnown RBP4.49□□□□□ -1.69
COPS3-217ENST00000583160 GATAD2AQ86YP4 633 aa4.49□□□□□ -1.69
COPS3-217ENST00000583160 IQCF1Q8N6M8 205 aa4.49□□□□□ -1.69
COPS3-217ENST00000583160 SMRP1Q8NCR6 262 aa4.49□□□□□ -1.69
COPS3-217ENST00000583160 C7orf57Q8NEG2 295 aa4.49□□□□□ -1.69
COPS3-217ENST00000583160 ZNF419Q96HQ0 510 aaPredicted RBP4.49□□□□□ -1.69
COPS3-217ENST00000583160 SORBS1Q9BX66 1292 aaKnown RBP4.49□□□□□ -1.69
COPS3-217ENST00000583160 PROCRQ9UNN8 238 aa4.49□□□□□ -1.69
COPS3-217ENST00000583160 COPG1Q9Y678 874 aaKnown RBP4.49□□□□□ -1.69
COPS3-217ENST00000583160 DOCK7Q96N67 2140 aa4.48□□□□□ -1.69
COPS3-217ENST00000583160 SLC38A8A6NNN8 435 aa4.48□□□□□ -1.69
COPS3-217ENST00000583160 MCIDASD6RGH6 385 aa4.48□□□□□ -1.69
COPS3-217ENST00000583160 LARGE1O95461 756 aa4.48□□□□□ -1.69
COPS3-217ENST00000583160 TGFB3P10600 412 aa4.48□□□□□ -1.69
COPS3-217ENST00000583160 TNFRSF8P28908 595 aa4.48□□□□□ -1.69
COPS3-217ENST00000583160 CHRNA5P30532 468 aa4.48□□□□□ -1.69
COPS3-217ENST00000583160 TECP42680 631 aa4.48□□□□□ -1.69
COPS3-217ENST00000583160 BTKQ06187 659 aa4.48□□□□□ -1.69
COPS3-217ENST00000583160 STARD3Q14849 445 aa4.48□□□□□ -1.69
COPS3-217ENST00000583160 BTBD16Q32M84 506 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms