RNA–Protein interactions for RNA: ENST00000582844.5

CSNK1D-221, Transcript of casein kinase 1 delta, humanhuman

TSL 5

Gene CSNK1D, Length 957 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-221ENST00000582844 TAF3Q5VWG9 929 aa21.98■■□□□ 1.11
CSNK1D-221ENST00000582844 ZNF776Q68DI1 518 aaPredicted RBP21.98■■□□□ 1.11
CSNK1D-221ENST00000582844 FBXL22Q6P050 247 aa21.98■■□□□ 1.11
CSNK1D-221ENST00000582844 TMEM35BQ8NCS4 154 aa21.98■■□□□ 1.11
CSNK1D-221ENST00000582844 GPT2Q8TD30 523 aa21.98■■□□□ 1.11
CSNK1D-221ENST00000582844 RPL10LQ96L21 214 aaKnown RBP21.98■■□□□ 1.11
CSNK1D-221ENST00000582844 PCED1AQ9H1Q7 454 aa21.98■■□□□ 1.11
CSNK1D-221ENST00000582844 DNAAF2Q9NVR5 837 aaKnown RBP21.98■■□□□ 1.11
CSNK1D-221ENST00000582844 M0QYT0 321 aa21.97■■□□□ 1.11
CSNK1D-221ENST00000582844 BCAT2O15382 392 aaPredicted RBP21.97■■□□□ 1.11
CSNK1D-221ENST00000582844 SRPRAP08240 638 aaKnown RBP21.97■■□□□ 1.11
CSNK1D-221ENST00000582844 CD59P13987 128 aa21.97■■□□□ 1.11
CSNK1D-221ENST00000582844 CDH5P33151 784 aaPredicted RBP21.97■■□□□ 1.11
CSNK1D-221ENST00000582844 MATKP42679 507 aa21.97■■□□□ 1.11
CSNK1D-221ENST00000582844 FOXC1Q12948 553 aa21.97■■□□□ 1.11
CSNK1D-221ENST00000582844 GRIK2Q13002 908 aa21.97■■□□□ 1.11
CSNK1D-221ENST00000582844 ARID5BQ14865 1188 aa21.97■■□□□ 1.11
CSNK1D-221ENST00000582844 RABGAP1LQ5R372 815 aa21.97■■□□□ 1.11
CSNK1D-221ENST00000582844 C9orf64Q5T6V5 341 aa21.97■■□□□ 1.11
CSNK1D-221ENST00000582844 KDM1BQ8NB78 822 aa21.97■■□□□ 1.11
CSNK1D-221ENST00000582844 ZNF397Q8NF99 534 aaPredicted RBP21.97■■□□□ 1.11
CSNK1D-221ENST00000582844 C1orf216Q8TAB5 229 aa21.97■■□□□ 1.11
CSNK1D-221ENST00000582844 ENOX1Q8TC92 643 aaKnown RBP21.97■■□□□ 1.11
CSNK1D-221ENST00000582844 SNX19Q92543 992 aa21.97■■□□□ 1.11
CSNK1D-221ENST00000582844 IGSF8Q969P0 613 aa21.97■■□□□ 1.11
CSNK1D-221ENST00000582844 ADAM33Q9BZ11 813 aa21.97■■□□□ 1.11
CSNK1D-221ENST00000582844 BTBD1Q9H0C5 482 aa21.97■■□□□ 1.11
CSNK1D-221ENST00000582844 VPS16Q9H269 839 aa21.97■■□□□ 1.11
CSNK1D-221ENST00000582844 SLCO1B1Q9Y6L6 691 aa21.97■■□□□ 1.11
CSNK1D-221ENST00000582844 CACNA1BQ00975 2339 aa21.97■■□□□ 1.11
CSNK1D-221ENST00000582844 NYNRINQ9P2P1 1898 aaKnown RBP21.96■■□□□ 1.11
CSNK1D-221ENST00000582844 GJB3O75712 270 aa21.96■■□□□ 1.11
CSNK1D-221ENST00000582844 SEMA4FO95754 770 aa21.96■■□□□ 1.11
CSNK1D-221ENST00000582844 PDGFRAP16234 1089 aa21.96■■□□□ 1.11
CSNK1D-221ENST00000582844 TFE3P19532 575 aaPredicted RBP21.96■■□□□ 1.11
CSNK1D-221ENST00000582844 MZF1P28698 734 aaPredicted RBP21.96■■□□□ 1.11
CSNK1D-221ENST00000582844 GGCXP38435 758 aa21.96■■□□□ 1.11
CSNK1D-221ENST00000582844 IRAK1P51617 712 aa21.96■■□□□ 1.11
CSNK1D-221ENST00000582844 CENPCQ03188 943 aa21.96■■□□□ 1.11
CSNK1D-221ENST00000582844 AUHQ13825 339 aaKnown RBP21.96■■□□□ 1.11
CSNK1D-221ENST00000582844 TTC31Q49AM3 519 aaPredicted RBP21.96■■□□□ 1.11
CSNK1D-221ENST00000582844 OTUD1Q5VV17 481 aaPredicted RBP21.96■■□□□ 1.11
CSNK1D-221ENST00000582844 ZDHHC17Q8IUH5 632 aa21.96■■□□□ 1.11
CSNK1D-221ENST00000582844 RPRD1AQ96P16 312 aaPredicted RBP21.96■■□□□ 1.11
CSNK1D-221ENST00000582844 STK33Q9BYT3 514 aa21.96■■□□□ 1.11
CSNK1D-221ENST00000582844 VANGL2Q9ULK5 521 aa21.96■■□□□ 1.11
CSNK1D-221ENST00000582844 ZBTB32Q9Y2Y4 487 aaPredicted RBP21.96■■□□□ 1.11
CSNK1D-221ENST00000582844 HS3ST4Q9Y661 456 aa21.96■■□□□ 1.11
CSNK1D-221ENST00000582844 A0A1B0GVM2 712 aa21.95■■□□□ 1.1
CSNK1D-221ENST00000582844 SPAARA0A1B0GVQ0 90 aa21.95■■□□□ 1.1
CSNK1D-221ENST00000582844 TARSL2A2RTX5 802 aaKnown RBP21.95■■□□□ 1.1
CSNK1D-221ENST00000582844 TCAF2A6NFQ2 919 aa21.95■■□□□ 1.1
CSNK1D-221ENST00000582844 RNASEH1O60930 286 aaKnown RBP21.95■■□□□ 1.1
CSNK1D-221ENST00000582844 PAGE1O75459 146 aa21.95■■□□□ 1.1
CSNK1D-221ENST00000582844 TOP3BO95985 862 aaKnown RBP21.95■■□□□ 1.1
CSNK1D-221ENST00000582844 GABRB2P47870 512 aa21.95■■□□□ 1.1
CSNK1D-221ENST00000582844 STK19P49842 368 aaPredicted RBP21.95■■□□□ 1.1
CSNK1D-221ENST00000582844 BNC1Q01954 994 aa21.95■■□□□ 1.1
CSNK1D-221ENST00000582844 SLC12A1Q13621 1099 aa21.95■■□□□ 1.1
CSNK1D-221ENST00000582844 C2CD6Q53TS8 623 aa21.95■■□□□ 1.1
CSNK1D-221ENST00000582844 TTC39BQ5VTQ0 682 aaPredicted RBP21.95■■□□□ 1.1
CSNK1D-221ENST00000582844 CDKAL1Q5VV42 579 aa21.95■■□□□ 1.1
CSNK1D-221ENST00000582844 RNF219Q5W0B1 726 aaPredicted RBP21.95■■□□□ 1.1
CSNK1D-221ENST00000582844 CXorf57Q6NSI4 855 aaKnown RBP21.95■■□□□ 1.1
CSNK1D-221ENST00000582844 C14orf80Q86SX3 495 aa21.95■■□□□ 1.1
CSNK1D-221ENST00000582844 NOP9Q86U38 636 aaKnown RBP21.95■■□□□ 1.1
CSNK1D-221ENST00000582844 ERICH1Q86X53 443 aa21.95■■□□□ 1.1
CSNK1D-221ENST00000582844 MMAAQ8IVH4 418 aaKnown RBP21.95■■□□□ 1.1
CSNK1D-221ENST00000582844 GANCQ8TET4 914 aa21.95■■□□□ 1.1
CSNK1D-221ENST00000582844 BIRC7Q96CA5 298 aa21.95■■□□□ 1.1
CSNK1D-221ENST00000582844 C18orf8Q96DM3 657 aa21.95■■□□□ 1.1
CSNK1D-221ENST00000582844 FAM129BQ96TA1 746 aa21.95■■□□□ 1.1
CSNK1D-221ENST00000582844 NPY6RQ99463 290 aa21.95■■□□□ 1.1
CSNK1D-221ENST00000582844 ZDHHC5Q9C0B5 715 aa21.95■■□□□ 1.1
CSNK1D-221ENST00000582844 SIK2Q9H0K1 926 aa21.95■■□□□ 1.1
CSNK1D-221ENST00000582844 PABPC3Q9H361 631 aaKnown RBP21.95■■□□□ 1.1
CSNK1D-221ENST00000582844 SGK2Q9HBY8 427 aa21.95■■□□□ 1.1
CSNK1D-221ENST00000582844 PIGVQ9NUD9 493 aa21.95■■□□□ 1.1
CSNK1D-221ENST00000582844 FBXL12Q9NXK8 326 aa21.95■■□□□ 1.1
CSNK1D-221ENST00000582844 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP21.95■■□□□ 1.12e-12■■■■■ 34.1
CSNK1D-221ENST00000582844 NCKAP1Q9Y2A7 1128 aa21.95■■□□□ 1.1
CSNK1D-221ENST00000582844 ITIH6Q6UXX5 1313 aa21.95■■□□□ 1.1
CSNK1D-221ENST00000582844 KMT2BQ9UMN6 2715 aaPredicted RBP21.95■■□□□ 1.1
CSNK1D-221ENST00000582844 EDDM13A0A1B0GTR0 161 aa21.94■■□□□ 1.1
CSNK1D-221ENST00000582844 F8VZ95 297 aa21.94■■□□□ 1.1
CSNK1D-221ENST00000582844 SPINK2P20155 84 aa21.94■■□□□ 1.1
CSNK1D-221ENST00000582844 KLK7P49862 253 aa21.94■■□□□ 1.1
CSNK1D-221ENST00000582844 PLK1P53350 603 aa21.94■■□□□ 1.1
CSNK1D-221ENST00000582844 FAM193AP78312 1265 aa21.94■■□□□ 1.1
CSNK1D-221ENST00000582844 SIM1P81133 766 aaPredicted RBP21.94■■□□□ 1.1
CSNK1D-221ENST00000582844 KRT31Q15323 416 aa21.94■■□□□ 1.1
CSNK1D-221ENST00000582844 CST6Q15828 149 aa21.94■■□□□ 1.1
CSNK1D-221ENST00000582844 RBM43Q6ZSC3 357 aaKnown RBP21.94■■□□□ 1.1
CSNK1D-221ENST00000582844 XYLT1Q86Y38 959 aa21.94■■□□□ 1.1
CSNK1D-221ENST00000582844 OR52K2Q8NGK3 314 aa21.94■■□□□ 1.1
CSNK1D-221ENST00000582844 PTPRN2Q92932 1015 aa21.94■■□□□ 1.1
CSNK1D-221ENST00000582844 WDCPQ9H6R7 721 aa21.94■■□□□ 1.1
CSNK1D-221ENST00000582844 ANLNQ9NQW6 1124 aa21.94■■□□□ 1.1
CSNK1D-221ENST00000582844 FANCLQ9NW38 375 aa21.94■■□□□ 1.1
CSNK1D-221ENST00000582844 RRN3Q9NYV6 651 aa21.94■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms