RNA–Protein interactions for RNA: ENST00000582288.1

TVP23B-210, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 3

Gene TVP23B, Length 336 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-210ENST00000582288 TPCN2Q8NHX9 752 aa6.49□□□□□ -1.37
TVP23B-210ENST00000582288 GANCQ8TET4 914 aa6.49□□□□□ -1.37
TVP23B-210ENST00000582288 NOC3LQ8WTT2 800 aaKnown RBP6.49□□□□□ -1.37
TVP23B-210ENST00000582288 CYB5D2Q8WUJ1 264 aa6.49□□□□□ -1.37
TVP23B-210ENST00000582288 TAF4BQ92750 862 aa6.49□□□□□ -1.37
TVP23B-210ENST00000582288 TTC17Q96AE7 1141 aa6.49□□□□□ -1.37
TVP23B-210ENST00000582288 IFT43Q96FT9 208 aa6.49□□□□□ -1.37
TVP23B-210ENST00000582288 PSMG3-AS1Q96PY0 264 aa6.49□□□□□ -1.37
TVP23B-210ENST00000582288 CCNL2Q96S94 520 aaPredicted RBP6.49□□□□□ -1.37
TVP23B-210ENST00000582288 OMDQ99983 421 aa6.49□□□□□ -1.37
TVP23B-210ENST00000582288 REPIN1Q9BWE0 567 aaKnown RBP6.49□□□□□ -1.37
TVP23B-210ENST00000582288 SRRTQ9BXP5 876 aaKnown RBP6.49□□□□□ -1.37
TVP23B-210ENST00000582288 DNAI2Q9GZS0 605 aa6.49□□□□□ -1.37
TVP23B-210ENST00000582288 ABCG4Q9H172 646 aa6.49□□□□□ -1.37
TVP23B-210ENST00000582288 NEUROG2Q9H2A3 272 aa6.49□□□□□ -1.37
TVP23B-210ENST00000582288 SMYD3Q9H7B4 428 aa6.49□□□□□ -1.37
TVP23B-210ENST00000582288 KLHL11Q9NVR0 708 aa6.49□□□□□ -1.37
TVP23B-210ENST00000582288 MARCH2Q9P0N8 246 aa6.49□□□□□ -1.37
TVP23B-210ENST00000582288 TBC1D7Q9P0N9 293 aa6.49□□□□□ -1.37
TVP23B-210ENST00000582288 ARHGAP20Q9P2F6 1191 aa6.49□□□□□ -1.37
TVP23B-210ENST00000582288 CGNQ9P2M7 1197 aaKnown RBP6.49□□□□□ -1.37
TVP23B-210ENST00000582288 GGA2Q9UJY4 613 aa6.49□□□□□ -1.37
TVP23B-210ENST00000582288 ACSL6Q9UKU0 697 aa6.49□□□□□ -1.37
TVP23B-210ENST00000582288 ATXN7L1Q9ULK2 861 aaPredicted RBP6.49□□□□□ -1.37
TVP23B-210ENST00000582288 RELNP78509 3460 aa6.49□□□□□ -1.37
TVP23B-210ENST00000582288 PTPN13Q12923 2485 aa6.48□□□□□ -1.37
TVP23B-210ENST00000582288 A0A1B0GVM2 712 aa6.48□□□□□ -1.37
TVP23B-210ENST00000582288 A0A1W2PP55 124 aa6.48□□□□□ -1.37
TVP23B-210ENST00000582288 NEMP2A6NFY4 417 aa6.48□□□□□ -1.37
TVP23B-210ENST00000582288 PRAMEF26H0Y7S4 382 aa6.48□□□□□ -1.37
TVP23B-210ENST00000582288 IRAK2O43187 625 aa6.48□□□□□ -1.37
TVP23B-210ENST00000582288 PHACTR2O75167 634 aa6.48□□□□□ -1.37
TVP23B-210ENST00000582288 TCEA3O75764 348 aa6.48□□□□□ -1.37
TVP23B-210ENST00000582288 RPN1P04843 607 aaKnown RBP6.48□□□□□ -1.37
TVP23B-210ENST00000582288 SRPRAP08240 638 aaKnown RBP6.48□□□□□ -1.37
TVP23B-210ENST00000582288 CCDC130P13994 396 aa6.48□□□□□ -1.37
TVP23B-210ENST00000582288 CR2P20023 1033 aa6.48□□□□□ -1.37
TVP23B-210ENST00000582288 DGKAP23743 735 aa6.48□□□□□ -1.37
TVP23B-210ENST00000582288 SLC8A1P32418 973 aa6.48□□□□□ -1.37
TVP23B-210ENST00000582288 ST8SIA6P61647 398 aa6.48□□□□□ -1.37
TVP23B-210ENST00000582288 INCA1Q0VD86 236 aa6.48□□□□□ -1.37
TVP23B-210ENST00000582288 EFEMP1Q12805 493 aa6.48□□□□□ -1.37
TVP23B-210ENST00000582288 CLN3Q13286 438 aa6.48□□□□□ -1.37
TVP23B-210ENST00000582288 STAT4Q14765 748 aa6.48□□□□□ -1.37
TVP23B-210ENST00000582288 ZNF699Q32M78 642 aa6.48□□□□□ -1.37
TVP23B-210ENST00000582288 C9orf64Q5T6V5 341 aa6.48□□□□□ -1.37
TVP23B-210ENST00000582288 RRAGBQ5VZM2 374 aa6.48□□□□□ -1.37
TVP23B-210ENST00000582288 TRIM69Q86WT6 500 aa6.48□□□□□ -1.37
TVP23B-210ENST00000582288 C12orf56Q8IXR9 622 aa6.48□□□□□ -1.37
TVP23B-210ENST00000582288 CCDC65Q8IXS2 484 aa6.48□□□□□ -1.37
TVP23B-210ENST00000582288 ZNF366Q8N895 744 aa6.48□□□□□ -1.37
TVP23B-210ENST00000582288 XXYLT1Q8NBI6 393 aa6.48□□□□□ -1.37
TVP23B-210ENST00000582288 WDR48Q8TAF3 677 aa6.48□□□□□ -1.37
TVP23B-210ENST00000582288 FAM174AQ8TBP5 190 aa6.48□□□□□ -1.37
TVP23B-210ENST00000582288 ZNF507Q8TCN5 953 aa6.48□□□□□ -1.37
TVP23B-210ENST00000582288 TMEM174Q8WUU8 243 aa6.48□□□□□ -1.37
TVP23B-210ENST00000582288 CCDC127Q96BQ5 260 aa6.48□□□□□ -1.37
TVP23B-210ENST00000582288 SGF29Q96ES7 293 aa6.48□□□□□ -1.37
TVP23B-210ENST00000582288 TMA16Q96EY4 203 aaKnown RBP6.48□□□□□ -1.37
TVP23B-210ENST00000582288 CYFIP2Q96F07 1278 aa6.48□□□□□ -1.37
TVP23B-210ENST00000582288 MYO19Q96H55 970 aa6.48□□□□□ -1.37
TVP23B-210ENST00000582288 PRR11Q96HE9 360 aaPredicted RBP6.48□□□□□ -1.37
TVP23B-210ENST00000582288 DUSP23Q9BVJ7 150 aa6.48□□□□□ -1.37
TVP23B-210ENST00000582288 DUSP16Q9BY84 665 aa6.48□□□□□ -1.37
TVP23B-210ENST00000582288 TRIM4Q9C037 500 aa6.48□□□□□ -1.37
TVP23B-210ENST00000582288 LRRC27Q9C0I9 530 aa6.48□□□□□ -1.37
TVP23B-210ENST00000582288 GZF1Q9H116 711 aaPredicted RBP6.48□□□□□ -1.37
TVP23B-210ENST00000582288 OLA1Q9NTK5 396 aaKnown RBP6.48□□□□□ -1.37
TVP23B-210ENST00000582288 ABCB8Q9NUT2 735 aa6.48□□□□□ -1.37
TVP23B-210ENST00000582288 PANK4Q9NVE7 773 aa6.48□□□□□ -1.37
TVP23B-210ENST00000582288 NLGN3Q9NZ94 848 aa6.48□□□□□ -1.37
TVP23B-210ENST00000582288 SERGEFQ9UGK8 458 aa6.48□□□□□ -1.37
TVP23B-210ENST00000582288 RASAL2Q9UJF2 1139 aa6.48□□□□□ -1.37
TVP23B-210ENST00000582288 NUDT5Q9UKK9 219 aa6.48□□□□□ -1.37
TVP23B-210ENST00000582288 SATB2Q9UPW6 733 aa6.48□□□□□ -1.37
TVP23B-210ENST00000582288 HBS1LQ9Y450 684 aaKnown RBP6.48□□□□□ -1.37
TVP23B-210ENST00000582288 DNMT3AQ9Y6K1 912 aaPredicted RBP6.48□□□□□ -1.37
TVP23B-210ENST00000582288 UBE4BO95155 1302 aa6.48□□□□□ -1.37
TVP23B-210ENST00000582288 ITIH6Q6UXX5 1313 aa6.48□□□□□ -1.37
TVP23B-210ENST00000582288 SCAMP1O15126 338 aa6.47□□□□□ -1.37
TVP23B-210ENST00000582288 MID1O15344 667 aa6.47□□□□□ -1.37
TVP23B-210ENST00000582288 SIN3BO75182 1162 aa6.47□□□□□ -1.37
TVP23B-210ENST00000582288 RNASEH2AO75792 299 aaKnown RBP6.47□□□□□ -1.37
TVP23B-210ENST00000582288 GJB6O95452 261 aa6.47□□□□□ -1.37
TVP23B-210ENST00000582288 C4BPAP04003 597 aaKnown RBP6.47□□□□□ -1.37
TVP23B-210ENST00000582288 ITGA2BP08514 1039 aa6.47□□□□□ -1.37
TVP23B-210ENST00000582288 GIMD1P0DJR0 217 aa6.47□□□□□ -1.37
TVP23B-210ENST00000582288 IDEP14735 1019 aa6.47□□□□□ -1.37
TVP23B-210ENST00000582288 HOXD13P35453 343 aa6.47□□□□□ -1.37
TVP23B-210ENST00000582288 TXLNAP40222 546 aa6.47□□□□□ -1.37
TVP23B-210ENST00000582288 AFMP43652 599 aa6.47□□□□□ -1.37
TVP23B-210ENST00000582288 NDST1P52848 882 aa6.47□□□□□ -1.37
TVP23B-210ENST00000582288 NCOA4Q13772 614 aa6.47□□□□□ -1.37
TVP23B-210ENST00000582288 ELAVL3Q14576 367 aaKnown RBP6.47□□□□□ -1.37
TVP23B-210ENST00000582288 SETMARQ53H47 684 aaPredicted RBP6.47□□□□□ -1.37
TVP23B-210ENST00000582288 PM20D1Q6GTS8 502 aa6.47□□□□□ -1.37
TVP23B-210ENST00000582288 CCDC73Q6ZRK6 1079 aa6.47□□□□□ -1.37
TVP23B-210ENST00000582288 RSRC2Q7L4I2 434 aaKnown RBP6.47□□□□□ -1.37
TVP23B-210ENST00000582288 EPM2AIP1Q7L775 607 aaPredicted RBP6.47□□□□□ -1.37
TVP23B-210ENST00000582288 ZC3H3Q8IXZ2 948 aaKnown RBP6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms