RNA–Protein interactions for RNA: ENST00000582252.1

CCDC47-204, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2 BASIC

Gene CCDC47, Length 1,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-204ENST00000582252 KRT37O76014 449 aa23.25■■□□□ 1.31
CCDC47-204ENST00000582252 PSMB4P28070 264 aa23.25■■□□□ 1.31
CCDC47-204ENST00000582252 GARSP41250 739 aaKnown RBP23.25■■□□□ 1.31
CCDC47-204ENST00000582252 DEFB103AP81534 67 aa23.25■■□□□ 1.31
CCDC47-204ENST00000582252 SMARCB1Q12824 385 aa23.25■■□□□ 1.31
CCDC47-204ENST00000582252 IFT88Q13099 833 aa23.25■■□□□ 1.31
CCDC47-204ENST00000582252 HHATQ5VTY9 493 aa23.25■■□□□ 1.31
CCDC47-204ENST00000582252 FAM171A1Q5VUB5 890 aa23.25■■□□□ 1.31
CCDC47-204ENST00000582252 PSRC1Q6PGN9 363 aaPredicted RBP23.25■■□□□ 1.31
CCDC47-204ENST00000582252 CCDC121Q6ZUS5 278 aa23.25■■□□□ 1.31
CCDC47-204ENST00000582252 CYS1Q717R9 158 aa23.25■■□□□ 1.31
CCDC47-204ENST00000582252 CTAGE3PQ8IX95 158 aa23.25■■□□□ 1.31
CCDC47-204ENST00000582252 LZTR1Q8N653 840 aa23.25■■□□□ 1.31
CCDC47-204ENST00000582252 PDCD7Q8N8D1 485 aaKnown RBP23.25■■□□□ 1.31
CCDC47-204ENST00000582252 MZB1Q8WU39 189 aa23.25■■□□□ 1.31
CCDC47-204ENST00000582252 STAMBPL1Q96FJ0 436 aa23.25■■□□□ 1.31
CCDC47-204ENST00000582252 ABHD8Q96I13 439 aa23.25■■□□□ 1.31
CCDC47-204ENST00000582252 PAIP2Q9BPZ3 127 aaKnown RBP23.25■■□□□ 1.31
CCDC47-204ENST00000582252 VWA8A3KMH1 1905 aa23.24■■□□□ 1.31
CCDC47-204ENST00000582252 FGBP02675 491 aa23.24■■□□□ 1.31
CCDC47-204ENST00000582252 PTPN3P26045 913 aa23.24■■□□□ 1.31
CCDC47-204ENST00000582252 MRPL58Q14197 206 aaKnown RBP23.24■■□□□ 1.31
CCDC47-204ENST00000582252 NUGGCQ68CJ6 796 aa23.24■■□□□ 1.31
CCDC47-204ENST00000582252 UNC5AQ6ZN44 842 aa23.24■■□□□ 1.31
CCDC47-204ENST00000582252 OTOP2Q7RTS6 562 aa23.24■■□□□ 1.31
CCDC47-204ENST00000582252 GRAMD1AQ96CP6 724 aa23.24■■□□□ 1.31
CCDC47-204ENST00000582252 KIF9Q9HAQ2 790 aa23.24■■□□□ 1.31
CCDC47-204ENST00000582252 H7C4K7 107 aa23.23■■□□□ 1.31
CCDC47-204ENST00000582252 MYO1CO00159 1063 aa23.23■■□□□ 1.31
CCDC47-204ENST00000582252 SLC2A3P11169 496 aa23.23■■□□□ 1.31
CCDC47-204ENST00000582252 C16orf59Q7L2K0 433 aa23.23■■□□□ 1.31
CCDC47-204ENST00000582252 SCD5Q86SK9 330 aa23.23■■□□□ 1.31
CCDC47-204ENST00000582252 CEP57Q86XR8 500 aa23.23■■□□□ 1.31
CCDC47-204ENST00000582252 PPM1NQ8N819 430 aa23.23■■□□□ 1.31
CCDC47-204ENST00000582252 TBC1D31Q96DN5 1066 aa23.23■■□□□ 1.31
CCDC47-204ENST00000582252 MTBPQ96DY7 904 aa23.23■■□□□ 1.31
CCDC47-204ENST00000582252 ELAC2Q9BQ52 826 aaKnown RBP23.23■■□□□ 1.31
CCDC47-204ENST00000582252 PLCD4Q9BRC7 762 aa23.23■■□□□ 1.31
CCDC47-204ENST00000582252 A0A1W2PQH9 124 aa23.22■■□□□ 1.31
CCDC47-204ENST00000582252 RTN3O95197 1032 aaPredicted RBP23.22■■□□□ 1.31
CCDC47-204ENST00000582252 SNRPAP09012 282 aaKnown RBP23.22■■□□□ 1.31
CCDC47-204ENST00000582252 FGFR3P22607 806 aa23.22■■□□□ 1.31
CCDC47-204ENST00000582252 SERPINB9P50453 376 aa23.22■■□□□ 1.31
CCDC47-204ENST00000582252 WDR4P57081 412 aaKnown RBP23.22■■□□□ 1.31
CCDC47-204ENST00000582252 RNF187Q5TA31 235 aaPredicted RBP23.22■■□□□ 1.31
CCDC47-204ENST00000582252 STEAP4Q687X5 459 aa23.22■■□□□ 1.31
CCDC47-204ENST00000582252 RWDD4Q6NW29 188 aaKnown RBP23.22■■□□□ 1.31
CCDC47-204ENST00000582252 MSANTD2Q6P1R3 559 aa23.22■■□□□ 1.31
CCDC47-204ENST00000582252 NPWQ8N729 165 aa23.22■■□□□ 1.31
CCDC47-204ENST00000582252 SPPL2BQ8TCT7 592 aa23.22■■□□□ 1.31
CCDC47-204ENST00000582252 NR2E3Q9Y5X4 410 aa23.22■■□□□ 1.31
CCDC47-204ENST00000582252 ZBBXA8MT70 800 aa23.22■■□□□ 1.31
CCDC47-204ENST00000582252 KRT38O76015 456 aa23.22■■□□□ 1.31
CCDC47-204ENST00000582252 HOXC13P31276 330 aa23.22■■□□□ 1.31
CCDC47-204ENST00000582252 RPA3P35244 121 aaPredicted RBP23.22■■□□□ 1.31
CCDC47-204ENST00000582252 SLC11A1P49279 550 aa23.22■■□□□ 1.31
CCDC47-204ENST00000582252 NRG1Q02297 640 aaPredicted RBP23.22■■□□□ 1.31
CCDC47-204ENST00000582252 NAB1Q13506 487 aa23.22■■□□□ 1.31
CCDC47-204ENST00000582252 CASC4Q6P4E1 433 aa23.22■■□□□ 1.31
CCDC47-204ENST00000582252 RGS9BPQ6ZS82 235 aa23.22■■□□□ 1.31
CCDC47-204ENST00000582252 CDKL2Q92772 493 aa23.22■■□□□ 1.31
CCDC47-204ENST00000582252 CASP10Q92851 521 aa23.22■■□□□ 1.31
CCDC47-204ENST00000582252 ZNF689Q96CS4 500 aaPredicted RBP23.22■■□□□ 1.31
CCDC47-204ENST00000582252 SIK2Q9H0K1 926 aa23.22■■□□□ 1.31
CCDC47-204ENST00000582252 GBA3Q9H227 469 aa23.22■■□□□ 1.31
CCDC47-204ENST00000582252 RC3H2Q9HBD1 1191 aaKnown RBP23.22■■□□□ 1.31
CCDC47-204ENST00000582252 COMMD8Q9NX08 183 aa23.22■■□□□ 1.31
CCDC47-204ENST00000582252 SNX10Q9Y5X0 201 aa23.22■■□□□ 1.31
CCDC47-204ENST00000582252 FAM159BA6NKW6 160 aa23.21■■□□□ 1.31
CCDC47-204ENST00000582252 KCNK1O00180 336 aa23.21■■□□□ 1.31
CCDC47-204ENST00000582252 AP3B1O00203 1094 aa23.21■■□□□ 1.31
CCDC47-204ENST00000582252 PSMD3O43242 534 aa23.21■■□□□ 1.31
CCDC47-204ENST00000582252 SNX3O60493 162 aa23.21■■□□□ 1.31
CCDC47-204ENST00000582252 PAGE1O75459 146 aa23.21■■□□□ 1.31
CCDC47-204ENST00000582252 SRGAP2BP0DMP2 458 aa23.21■■□□□ 1.31
CCDC47-204ENST00000582252 PGAM1P18669 254 aa23.21■■□□□ 1.31
CCDC47-204ENST00000582252 CNTFP26441 200 aa23.21■■□□□ 1.31
CCDC47-204ENST00000582252 PSEN1P49768 467 aa23.21■■□□□ 1.31
CCDC47-204ENST00000582252 PRPSAP1Q14558 356 aa23.21■■□□□ 1.31
CCDC47-204ENST00000582252 PDK4Q16654 411 aa23.21■■□□□ 1.31
CCDC47-204ENST00000582252 PRPF39Q86UA1 669 aaKnown RBP23.21■■□□□ 1.31
CCDC47-204ENST00000582252 BANPQ8N9N5 519 aa23.21■■□□□ 1.31
CCDC47-204ENST00000582252 NETO2Q8NC67 525 aa23.21■■□□□ 1.31
CCDC47-204ENST00000582252 C2orf15Q8WU43 125 aaKnown RBP23.21■■□□□ 1.31
CCDC47-204ENST00000582252 CEP41Q9BYV8 373 aa23.21■■□□□ 1.31
CCDC47-204ENST00000582252 OLA1Q9NTK5 396 aaKnown RBP23.21■■□□□ 1.31
CCDC47-204ENST00000582252 FGFR1OP2Q9NVK5 253 aa23.21■■□□□ 1.31
CCDC47-204ENST00000582252 PCDH10Q9P2E7 1040 aa23.21■■□□□ 1.31
CCDC47-204ENST00000582252 SFMBT1Q9UHJ3 866 aa23.21■■□□□ 1.31
CCDC47-204ENST00000582252 TLR6Q9Y2C9 796 aa23.21■■□□□ 1.31
CCDC47-204ENST00000582252 FAM155BO75949 473 aa23.2■■□□□ 1.3
CCDC47-204ENST00000582252 SUN1O94901 812 aa23.2■■□□□ 1.3
CCDC47-204ENST00000582252 AP2A1O95782 977 aa23.2■■□□□ 1.3
CCDC47-204ENST00000582252 C1QAP02745 245 aa23.2■■□□□ 1.3
CCDC47-204ENST00000582252 GALTP07902 379 aa23.2■■□□□ 1.3
CCDC47-204ENST00000582252 CPB1P15086 417 aa23.2■■□□□ 1.3
CCDC47-204ENST00000582252 TEX44Q53QW1 395 aa23.2■■□□□ 1.3
CCDC47-204ENST00000582252 TMEM240Q5SV17 173 aa23.2■■□□□ 1.3
CCDC47-204ENST00000582252 FAM182AQ5T1J6 154 aa23.2■■□□□ 1.3
CCDC47-204ENST00000582252 FUT10Q6P4F1 479 aa23.2■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms