RNA–Protein interactions for RNA: ENST00000580061.5

CSNK1D-212, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 578 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-212ENST00000580061 NLRP14Q86W24 1093 aa16.37■□□□□ 0.21
CSNK1D-212ENST00000580061 PCDH19Q8TAB3 1148 aa16.37■□□□□ 0.21
CSNK1D-212ENST00000580061 DNASE1L2Q92874 299 aa16.37■□□□□ 0.21
CSNK1D-212ENST00000580061 PSMB7Q99436 277 aa16.37■□□□□ 0.21
CSNK1D-212ENST00000580061 TMEM248Q9NWD8 314 aa16.37■□□□□ 0.21
CSNK1D-212ENST00000580061 hCG_1818297A0A087WSY0 165 aa16.36■□□□□ 0.21
CSNK1D-212ENST00000580061 DCLK1O15075 740 aa16.36■□□□□ 0.21
CSNK1D-212ENST00000580061 LUC7L3O95232 432 aaKnown RBP16.36■□□□□ 0.21
CSNK1D-212ENST00000580061 TUBB4AP04350 444 aa16.36■□□□□ 0.21
CSNK1D-212ENST00000580061 SRFP11831 508 aa16.36■□□□□ 0.21
CSNK1D-212ENST00000580061 KRT10P13645 584 aa16.36■□□□□ 0.21
CSNK1D-212ENST00000580061 CXCR5P32302 372 aa16.36■□□□□ 0.21
CSNK1D-212ENST00000580061 PTPN7P35236 360 aa16.36■□□□□ 0.21
CSNK1D-212ENST00000580061 CETN2P41208 172 aa16.36■□□□□ 0.21
CSNK1D-212ENST00000580061 PAPD7Q5XG87 772 aaKnown RBP16.36■□□□□ 0.21
CSNK1D-212ENST00000580061 TFAP2DQ7Z6R9 452 aa16.36■□□□□ 0.21
CSNK1D-212ENST00000580061 PQLC3Q8N755 202 aa16.36■□□□□ 0.21
CSNK1D-212ENST00000580061 RTL3Q8N8U3 475 aaKnown RBP16.36■□□□□ 0.21
CSNK1D-212ENST00000580061 TTC8Q8TAM2 541 aa16.36■□□□□ 0.21
CSNK1D-212ENST00000580061 CSGALNACT1Q8TDX6 532 aa16.36■□□□□ 0.21
CSNK1D-212ENST00000580061 OSBPL8Q9BZF1 889 aa16.36■□□□□ 0.21
CSNK1D-212ENST00000580061 SLC2A4RGQ9NR83 387 aa16.36■□□□□ 0.21
CSNK1D-212ENST00000580061 NDFIP2Q9NV92 336 aa16.36■□□□□ 0.21
CSNK1D-212ENST00000580061 CLEC4EQ9ULY5 219 aa16.36■□□□□ 0.21
CSNK1D-212ENST00000580061 SNX12Q9UMY4 172 aa16.36■□□□□ 0.21
CSNK1D-212ENST00000580061 DUSP12Q9UNI6 340 aa16.36■□□□□ 0.21
CSNK1D-212ENST00000580061 EFR3BQ9Y2G0 817 aa16.36■□□□□ 0.21
CSNK1D-212ENST00000580061 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP16.35■□□□□ 0.21
CSNK1D-212ENST00000580061 ESPNB1AK53 854 aa16.35■□□□□ 0.21
CSNK1D-212ENST00000580061 H0Y626 953 aa16.35■□□□□ 0.21
CSNK1D-212ENST00000580061 KIF2AO00139 706 aaPredicted RBP16.35■□□□□ 0.21
CSNK1D-212ENST00000580061 CACNG3O60359 315 aa16.35■□□□□ 0.21
CSNK1D-212ENST00000580061 PRLRP16471 622 aa16.35■□□□□ 0.21
CSNK1D-212ENST00000580061 CASQ1P31415 396 aa16.35■□□□□ 0.21
CSNK1D-212ENST00000580061 GJA4P35212 333 aa16.35■□□□□ 0.21
CSNK1D-212ENST00000580061 MAPKAPK2P49137 400 aa16.35■□□□□ 0.21
CSNK1D-212ENST00000580061 PFKPQ01813 784 aa16.35■□□□□ 0.21
CSNK1D-212ENST00000580061 ZNF177Q13360 481 aaPredicted RBP16.35■□□□□ 0.21
CSNK1D-212ENST00000580061 LLGL1Q15334 1064 aa16.35■□□□□ 0.21
CSNK1D-212ENST00000580061 SEL1L2Q5TEA6 688 aa16.35■□□□□ 0.21
CSNK1D-212ENST00000580061 SLC9A4Q6AI14 798 aa16.35■□□□□ 0.21
CSNK1D-212ENST00000580061 CXorf57Q6NSI4 855 aaKnown RBP16.35■□□□□ 0.21
CSNK1D-212ENST00000580061 RNF135Q8IUD6 432 aa16.35■□□□□ 0.21
CSNK1D-212ENST00000580061 MFN1Q8IWA4 741 aa16.35■□□□□ 0.21
CSNK1D-212ENST00000580061 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.35■□□□□ 0.214e-6■■■□□ 14.8
CSNK1D-212ENST00000580061 ETFBKMTQ8IXQ9 262 aa16.35■□□□□ 0.21
CSNK1D-212ENST00000580061 CARNMT1Q8N4J0 409 aa16.35■□□□□ 0.21
CSNK1D-212ENST00000580061 NAT16Q8N8M0 369 aa16.35■□□□□ 0.21
CSNK1D-212ENST00000580061 FIBINQ8TAL6 211 aa16.35■□□□□ 0.21
CSNK1D-212ENST00000580061 WFDC5Q8TCV5 224 aa16.35■□□□□ 0.21
CSNK1D-212ENST00000580061 CHFRQ96EP1 664 aa16.35■□□□□ 0.21
CSNK1D-212ENST00000580061 XPO6Q96QU8 1125 aaKnown RBP16.35■□□□□ 0.21
CSNK1D-212ENST00000580061 OSBPL9Q96SU4 736 aa16.35■□□□□ 0.21
CSNK1D-212ENST00000580061 HERPUD2Q9BSE4 406 aa16.35■□□□□ 0.21
CSNK1D-212ENST00000580061 MAK16Q9BXY0 300 aaKnown RBP16.35■□□□□ 0.21
CSNK1D-212ENST00000580061 PRDM16Q9HAZ2 1276 aa16.35■□□□□ 0.21
CSNK1D-212ENST00000580061 ETNK2Q9NVF9 386 aa16.35■□□□□ 0.21
CSNK1D-212ENST00000580061 DONSONQ9NYP3 566 aa16.35■□□□□ 0.21
CSNK1D-212ENST00000580061 FBXO10Q9UK96 956 aa16.35■□□□□ 0.21
CSNK1D-212ENST00000580061 SORCS3Q9UPU3 1222 aa16.35■□□□□ 0.21
CSNK1D-212ENST00000580061 TBC1D30Q9Y2I9 924 aa16.35■□□□□ 0.21
CSNK1D-212ENST00000580061 NYNRINQ9P2P1 1898 aaKnown RBP16.34■□□□□ 0.21
CSNK1D-212ENST00000580061 OR1E1P30953 314 aa16.34■□□□□ 0.21
CSNK1D-212ENST00000580061 ADCY2Q08462 1091 aa16.34■□□□□ 0.21
CSNK1D-212ENST00000580061 CDH18Q13634 790 aa16.34■□□□□ 0.21
CSNK1D-212ENST00000580061 TFDP2Q14188 446 aa16.34■□□□□ 0.21
CSNK1D-212ENST00000580061 PAFAH1B3Q15102 231 aaKnown RBP16.34■□□□□ 0.21
CSNK1D-212ENST00000580061 FSCBQ5H9T9 825 aa16.34■□□□□ 0.21
CSNK1D-212ENST00000580061 TJAP1Q5JTD0 557 aa16.34■□□□□ 0.21
CSNK1D-212ENST00000580061 KAZNQ674X7 775 aa16.34■□□□□ 0.21
CSNK1D-212ENST00000580061 NCBP2-AS2Q69YL0 99 aa16.34■□□□□ 0.21
CSNK1D-212ENST00000580061 TMCO3Q6UWJ1 677 aa16.34■□□□□ 0.21
CSNK1D-212ENST00000580061 SETD3Q86TU7 594 aaPredicted RBP16.34■□□□□ 0.21
CSNK1D-212ENST00000580061 C12orf40Q86WS4 652 aa16.34■□□□□ 0.21
CSNK1D-212ENST00000580061 RFX6Q8HWS3 928 aa16.34■□□□□ 0.21
CSNK1D-212ENST00000580061 GJD3Q8N144 294 aa16.34■□□□□ 0.21
CSNK1D-212ENST00000580061 ZNF557Q8N988 423 aaPredicted RBP16.34■□□□□ 0.21
CSNK1D-212ENST00000580061 TRAF3IP1Q8TDR0 691 aaPredicted RBP16.34■□□□□ 0.21
CSNK1D-212ENST00000580061 PBKQ96KB5 322 aa16.34■□□□□ 0.21
CSNK1D-212ENST00000580061 HEMGNQ9BXL5 484 aa16.34■□□□□ 0.21
CSNK1D-212ENST00000580061 SLC2A11Q9BYW1 496 aa16.34■□□□□ 0.21
CSNK1D-212ENST00000580061 KLC2Q9H0B6 622 aa16.34■□□□□ 0.21
CSNK1D-212ENST00000580061 MFHAS1Q9Y4C4 1052 aa16.34■□□□□ 0.21
CSNK1D-212ENST00000580061 CES2O00748 559 aa16.33■□□□□ 0.2
CSNK1D-212ENST00000580061 APOL1O14791 398 aa16.33■□□□□ 0.2
CSNK1D-212ENST00000580061 ZNF500O60304 480 aaPredicted RBP16.33■□□□□ 0.2
CSNK1D-212ENST00000580061 CST8O60676 142 aa16.33■□□□□ 0.2
CSNK1D-212ENST00000580061 TULP3O75386 442 aa16.33■□□□□ 0.2
CSNK1D-212ENST00000580061 RHOCP08134 193 aa16.33■□□□□ 0.2
CSNK1D-212ENST00000580061 ZFXP17010 805 aaPredicted RBP16.33■□□□□ 0.2
CSNK1D-212ENST00000580061 TCP1P17987 556 aaKnown RBP16.33■□□□□ 0.2
CSNK1D-212ENST00000580061 EIF2DP41214 584 aaKnown RBP16.33■□□□□ 0.2
CSNK1D-212ENST00000580061 SOX9P48436 509 aa16.33■□□□□ 0.2
CSNK1D-212ENST00000580061 AMPD2Q01433 879 aa16.33■□□□□ 0.2
CSNK1D-212ENST00000580061 C6orf118Q5T5N4 469 aa16.33■□□□□ 0.2
CSNK1D-212ENST00000580061 CCDC117Q8IWD4 279 aaPredicted RBP16.33■□□□□ 0.2
CSNK1D-212ENST00000580061 UMODL1-AS1Q8N2C9 162 aa16.33■□□□□ 0.2
CSNK1D-212ENST00000580061 LZTR1Q8N653 840 aa16.33■□□□□ 0.2
CSNK1D-212ENST00000580061 NPWQ8N729 165 aa16.33■□□□□ 0.2
CSNK1D-212ENST00000580061 PLD5Q8N7P1 536 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms