RNA–Protein interactions for RNA: ENST00000579466.1

MSI2-208, Transcript of musashi RNA binding protein 2, humanhuman

TSL 3

Gene MSI2, Length 186 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSI2-208ENST00000579466 SKA1Q96BD8 255 aa9.97□□□□□ -0.81
MSI2-208ENST00000579466 FAM149B1Q96BN6 582 aa9.97□□□□□ -0.81
MSI2-208ENST00000579466 FCRL3Q96P31 734 aaPredicted RBP9.97□□□□□ -0.81
MSI2-208ENST00000579466 MYOCQ99972 504 aa9.97□□□□□ -0.81
MSI2-208ENST00000579466 GOLPH3LQ9H4A5 285 aa9.97□□□□□ -0.81
MSI2-208ENST00000579466 CNGB3Q9NQW8 809 aa9.97□□□□□ -0.81
MSI2-208ENST00000579466 XPO7Q9UIA9 1087 aaKnown RBP9.97□□□□□ -0.81
MSI2-208ENST00000579466 SLCO3A1Q9UIG8 710 aa9.97□□□□□ -0.81
MSI2-208ENST00000579466 ERVW-1Q9UQF0 538 aa9.97□□□□□ -0.81
MSI2-208ENST00000579466 PCDHB4Q9Y5E5 795 aa9.97□□□□□ -0.81
MSI2-208ENST00000579466 RAI2Q9Y5P3 530 aa9.97□□□□□ -0.81
MSI2-208ENST00000579466 TBC1D3DA0A087WVF3 549 aa9.96□□□□□ -0.82
MSI2-208ENST00000579466 TBC1D3IA0A087WXS9 549 aa9.96□□□□□ -0.82
MSI2-208ENST00000579466 TBC1D3EA0A087X179 549 aa9.96□□□□□ -0.82
MSI2-208ENST00000579466 TBC1D3KA0A087X1G2 549 aa9.96□□□□□ -0.82
MSI2-208ENST00000579466 A0A1W2PR77 199 aa9.96□□□□□ -0.82
MSI2-208ENST00000579466 TRIM49BA6NDI0 452 aa9.96□□□□□ -0.82
MSI2-208ENST00000579466 TBC1D3FA6NER0 549 aaPredicted RBP9.96□□□□□ -0.82
MSI2-208ENST00000579466 TBC1D3LB9A6J9 549 aa9.96□□□□□ -0.82
MSI2-208ENST00000579466 IRAK2O43187 625 aa9.96□□□□□ -0.82
MSI2-208ENST00000579466 BNIP3LO60238 219 aa9.96□□□□□ -0.82
MSI2-208ENST00000579466 DFNA5O60443 496 aa9.96□□□□□ -0.82
MSI2-208ENST00000579466 C1QL1O75973 258 aa9.96□□□□□ -0.82
MSI2-208ENST00000579466 LUC7L3O95232 432 aaKnown RBP9.96□□□□□ -0.82
MSI2-208ENST00000579466 MOCS3O95396 460 aa9.96□□□□□ -0.82
MSI2-208ENST00000579466 IGLV3-27P01718 113 aa9.96□□□□□ -0.82
MSI2-208ENST00000579466 ASLP04424 464 aa9.96□□□□□ -0.82
MSI2-208ENST00000579466 TBC1D3HP0C7X1 549 aa9.96□□□□□ -0.82
MSI2-208ENST00000579466 ADPRHP54922 357 aa9.96□□□□□ -0.82
MSI2-208ENST00000579466 ENPEPQ07075 957 aa9.96□□□□□ -0.82
MSI2-208ENST00000579466 C19orf57Q0VDD7 668 aa9.96□□□□□ -0.82
MSI2-208ENST00000579466 CCDC173Q0VFZ6 552 aa9.96□□□□□ -0.82
MSI2-208ENST00000579466 PNOCQ13519 176 aa9.96□□□□□ -0.82
MSI2-208ENST00000579466 EDRF1Q3B7T1 1238 aa9.96□□□□□ -0.82
MSI2-208ENST00000579466 DCAF6Q58WW2 860 aa9.96□□□□□ -0.82
MSI2-208ENST00000579466 MS4A13Q5J8X5 152 aa9.96□□□□□ -0.82
MSI2-208ENST00000579466 C9orf64Q5T6V5 341 aa9.96□□□□□ -0.82
MSI2-208ENST00000579466 RAP1GAP2Q684P5 730 aa9.96□□□□□ -0.82
MSI2-208ENST00000579466 TBC1D3GQ6DHY5 549 aa9.96□□□□□ -0.82
MSI2-208ENST00000579466 TBC1D3CQ6IPX1 549 aa9.96□□□□□ -0.82
MSI2-208ENST00000579466 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP9.96□□□□□ -0.82
MSI2-208ENST00000579466 SND1Q7KZF4 910 aaKnown RBP eCLIP9.96□□□□□ -0.82
MSI2-208ENST00000579466 TAC4Q86UU9 113 aa9.96□□□□□ -0.82
MSI2-208ENST00000579466 CHSY1Q86X52 802 aa9.96□□□□□ -0.82
MSI2-208ENST00000579466 CIR1Q86X95 450 aaPredicted RBP9.96□□□□□ -0.82
MSI2-208ENST00000579466 TBC1D3Q8IZP1 549 aaPredicted RBP9.96□□□□□ -0.82
MSI2-208ENST00000579466 APCDD1Q8J025 514 aa9.96□□□□□ -0.82
MSI2-208ENST00000579466 LGI2Q8N0V4 545 aa9.96□□□□□ -0.82
MSI2-208ENST00000579466 PPM1KQ8N3J5 372 aa9.96□□□□□ -0.82
MSI2-208ENST00000579466 FIBINQ8TAL6 211 aa9.96□□□□□ -0.82
MSI2-208ENST00000579466 DQX1Q8TE96 717 aaKnown RBP9.96□□□□□ -0.82
MSI2-208ENST00000579466 KCTD13Q8WZ19 329 aa9.96□□□□□ -0.82
MSI2-208ENST00000579466 KAT5Q92993 513 aa9.96□□□□□ -0.82
MSI2-208ENST00000579466 TTC17Q96AE7 1141 aa9.96□□□□□ -0.82
MSI2-208ENST00000579466 NAF1Q96HR8 494 aaKnown RBP9.96□□□□□ -0.82
MSI2-208ENST00000579466 FCRL2Q96LA5 508 aaPredicted RBP9.96□□□□□ -0.82
MSI2-208ENST00000579466 ZSWIM1Q9BR11 485 aa9.96□□□□□ -0.82
MSI2-208ENST00000579466 ST7Q9NRC1 585 aa9.96□□□□□ -0.82
MSI2-208ENST00000579466 SCML1Q9UN30 329 aa9.96□□□□□ -0.82
MSI2-208ENST00000579466 NAALADL1Q9UQQ1 740 aa9.96□□□□□ -0.82
MSI2-208ENST00000579466 CA5BQ9Y2D0 317 aa9.96□□□□□ -0.82
MSI2-208ENST00000579466 PCDHGA1Q9Y5H4 931 aa9.96□□□□□ -0.82
MSI2-208ENST00000579466 ZNF462Q96JM2 2506 aa9.95□□□□□ -0.82
MSI2-208ENST00000579466 SYNJ2BP-COX16A0A087WUM0 186 aa9.95□□□□□ -0.82
MSI2-208ENST00000579466 EDDM13A0A1B0GTR0 161 aa9.95□□□□□ -0.82
MSI2-208ENST00000579466 TLR4O00206 839 aa9.95□□□□□ -0.82
MSI2-208ENST00000579466 RRP8O43159 456 aaKnown RBP9.95□□□□□ -0.82
MSI2-208ENST00000579466 PAPSS1O43252 624 aaPredicted RBP9.95□□□□□ -0.82
MSI2-208ENST00000579466 BRINP1O60477 761 aa9.95□□□□□ -0.82
MSI2-208ENST00000579466 RTN2O75298 545 aa9.95□□□□□ -0.82
MSI2-208ENST00000579466 PDGFRAP16234 1089 aa9.95□□□□□ -0.82
MSI2-208ENST00000579466 PMS1P54277 932 aaKnown RBP9.95□□□□□ -0.82
MSI2-208ENST00000579466 NXPH1P58417 271 aa9.95□□□□□ -0.82
MSI2-208ENST00000579466 KRT85P78386 507 aa9.95□□□□□ -0.82
MSI2-208ENST00000579466 NUCB2P80303 420 aa9.95□□□□□ -0.82
MSI2-208ENST00000579466 SFSWAPQ12872 951 aaKnown RBP9.95□□□□□ -0.82
MSI2-208ENST00000579466 PKDCCQ504Y2 493 aa9.95□□□□□ -0.82
MSI2-208ENST00000579466 SLC45A4Q5BKX6 768 aa9.95□□□□□ -0.82
MSI2-208ENST00000579466 MPP7Q5T2T1 576 aa9.95□□□□□ -0.82
MSI2-208ENST00000579466 FBXL19Q6PCT2 694 aa9.95□□□□□ -0.82
MSI2-208ENST00000579466 LCLAT1Q6UWP7 414 aa9.95□□□□□ -0.82
MSI2-208ENST00000579466 KDM7AQ6ZMT4 941 aa9.95□□□□□ -0.82
MSI2-208ENST00000579466 SPATS2Q86XZ4 545 aaKnown RBP9.95□□□□□ -0.82
MSI2-208ENST00000579466 UBR7Q8N806 425 aa9.95□□□□□ -0.82
MSI2-208ENST00000579466 ZNF557Q8N988 423 aaPredicted RBP9.95□□□□□ -0.82
MSI2-208ENST00000579466 IRGQQ8WZA9 623 aa9.95□□□□□ -0.82
MSI2-208ENST00000579466 ERCC4Q92889 916 aaPredicted RBP9.95□□□□□ -0.82
MSI2-208ENST00000579466 PTPRN2Q92932 1015 aa9.95□□□□□ -0.82
MSI2-208ENST00000579466 SNX21Q969T3 373 aa9.95□□□□□ -0.82
MSI2-208ENST00000579466 FAXDC2Q96IV6 333 aa9.95□□□□□ -0.82
MSI2-208ENST00000579466 LMLNQ96KR4 655 aa9.95□□□□□ -0.82
MSI2-208ENST00000579466 SERPINB11Q96P15 392 aa9.95□□□□□ -0.82
MSI2-208ENST00000579466 FAM129BQ96TA1 746 aa9.95□□□□□ -0.82
MSI2-208ENST00000579466 TSG101Q99816 390 aa9.95□□□□□ -0.82
MSI2-208ENST00000579466 DDX50Q9BQ39 737 aaKnown RBP9.95□□□□□ -0.82
MSI2-208ENST00000579466 GDPD2Q9HCC8 539 aa9.95□□□□□ -0.82
MSI2-208ENST00000579466 COX16Q9P0S2 106 aa9.95□□□□□ -0.82
MSI2-208ENST00000579466 TJP2Q9UDY2 1190 aa9.95□□□□□ -0.82
MSI2-208ENST00000579466 FZD4Q9ULV1 537 aa9.95□□□□□ -0.82
MSI2-208ENST00000579466 KALRNO60229 2985 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms