RNA–Protein interactions for RNA: ENST00000578896.1

GGA3-207, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5

Gene GGA3, Length 439 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-207ENST00000578896 MDM1Q8TC05 714 aa9.25□□□□□ -0.93
GGA3-207ENST00000578896 ZNF606Q8WXB4 792 aa9.25□□□□□ -0.93
GGA3-207ENST00000578896 SLC6A18Q96N87 628 aa9.25□□□□□ -0.93
GGA3-207ENST00000578896 SERPINB11Q96P15 392 aa9.25□□□□□ -0.93
GGA3-207ENST00000578896 SLC4A5Q9BY07 1137 aa9.25□□□□□ -0.93
GGA3-207ENST00000578896 RSPH9Q9H1X1 276 aaPredicted RBP9.25□□□□□ -0.93
GGA3-207ENST00000578896 PABPC3Q9H361 631 aaKnown RBP9.25□□□□□ -0.93
GGA3-207ENST00000578896 TOR4AQ9NXH8 423 aa9.25□□□□□ -0.93
GGA3-207ENST00000578896 AJAP1Q9UKB5 411 aaPredicted RBP9.25□□□□□ -0.93
GGA3-207ENST00000578896 TLR6Q9Y2C9 796 aa9.25□□□□□ -0.93
GGA3-207ENST00000578896 NFE2L3Q9Y4A8 694 aa9.25□□□□□ -0.93
GGA3-207ENST00000578896 CEP83Q9Y592 693 aa9.25□□□□□ -0.93
GGA3-207ENST00000578896 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.25□□□□□ -0.93
GGA3-207ENST00000578896 ITPR1Q14643 2758 aa9.25□□□□□ -0.93
GGA3-207ENST00000578896 SMG1Q96Q15 3661 aaKnown RBP9.25□□□□□ -0.93
GGA3-207ENST00000578896 BICDL2A1A5D9 508 aa9.24□□□□□ -0.93
GGA3-207ENST00000578896 FAM149AA5PLN7 773 aa9.24□□□□□ -0.93
GGA3-207ENST00000578896 BECN2A8MW95 431 aa9.24□□□□□ -0.93
GGA3-207ENST00000578896 P4HA2O15460 535 aa9.24□□□□□ -0.93
GGA3-207ENST00000578896 IRAK2O43187 625 aa9.24□□□□□ -0.93
GGA3-207ENST00000578896 RNASEH2AO75792 299 aaKnown RBP9.24□□□□□ -0.93
GGA3-207ENST00000578896 LUC7L3O95232 432 aaKnown RBP9.24□□□□□ -0.93
GGA3-207ENST00000578896 TRUB2O95900 331 aaKnown RBP9.24□□□□□ -0.93
GGA3-207ENST00000578896 WNT1P04628 370 aa9.24□□□□□ -0.93
GGA3-207ENST00000578896 PDGFRAP16234 1089 aa9.24□□□□□ -0.93
GGA3-207ENST00000578896 CD27P26842 260 aa9.24□□□□□ -0.93
GGA3-207ENST00000578896 MZF1P28698 734 aaPredicted RBP9.24□□□□□ -0.93
GGA3-207ENST00000578896 GNA15P30679 374 aa9.24□□□□□ -0.93
GGA3-207ENST00000578896 SLC8A1P32418 973 aa9.24□□□□□ -0.93
GGA3-207ENST00000578896 RPL34P49207 117 aaKnown RBP9.24□□□□□ -0.93
GGA3-207ENST00000578896 IRAK1P51617 712 aa9.24□□□□□ -0.93
GGA3-207ENST00000578896 GALCP54803 685 aa9.24□□□□□ -0.93
GGA3-207ENST00000578896 PAK1Q13153 545 aa9.24□□□□□ -0.93
GGA3-207ENST00000578896 BECN1Q14457 450 aa9.24□□□□□ -0.93
GGA3-207ENST00000578896 E2F5Q15329 346 aa9.24□□□□□ -0.93
GGA3-207ENST00000578896 CST6Q15828 149 aa9.24□□□□□ -0.93
GGA3-207ENST00000578896 CAMK4Q16566 473 aa9.24□□□□□ -0.93
GGA3-207ENST00000578896 HNRNPA1L2Q32P51 320 aaKnown RBP9.24□□□□□ -0.93
GGA3-207ENST00000578896 TTC31Q49AM3 519 aaPredicted RBP9.24□□□□□ -0.93
GGA3-207ENST00000578896 KIAA0895LQ68EN5 471 aa9.24□□□□□ -0.93
GGA3-207ENST00000578896 IL27RAQ6UWB1 636 aa9.24□□□□□ -0.93
GGA3-207ENST00000578896 CCNI2Q6ZMN8 369 aaPredicted RBP9.24□□□□□ -0.93
GGA3-207ENST00000578896 ADAT2Q7Z6V5 191 aaKnown RBP9.24□□□□□ -0.93
GGA3-207ENST00000578896 GATAD2AQ86YP4 633 aa9.24□□□□□ -0.93
GGA3-207ENST00000578896 DEFB106AQ8N104 65 aa9.24□□□□□ -0.93
GGA3-207ENST00000578896 WDTC1Q8N5D0 677 aa9.24□□□□□ -0.93
GGA3-207ENST00000578896 BAHD1Q8TBE0 780 aaPredicted RBP9.24□□□□□ -0.93
GGA3-207ENST00000578896 AZIN2Q96A70 460 aa9.24□□□□□ -0.93
GGA3-207ENST00000578896 MED15Q96RN5 788 aa9.24□□□□□ -0.93
GGA3-207ENST00000578896 FAM129BQ96TA1 746 aa9.24□□□□□ -0.93
GGA3-207ENST00000578896 DDX50Q9BQ39 737 aaKnown RBP9.24□□□□□ -0.93
GGA3-207ENST00000578896 SGK2Q9HBY8 427 aa9.24□□□□□ -0.93
GGA3-207ENST00000578896 LHX6Q9UPM6 363 aa9.24□□□□□ -0.93
GGA3-207ENST00000578896 CNTN6Q9UQ52 1028 aa9.24□□□□□ -0.93
GGA3-207ENST00000578896 APOBEC2Q9Y235 224 aaKnown RBP9.24□□□□□ -0.93
GGA3-207ENST00000578896 NCKAP1Q9Y2A7 1128 aa9.24□□□□□ -0.93
GGA3-207ENST00000578896 SNX10Q9Y5X0 201 aa9.24□□□□□ -0.93
GGA3-207ENST00000578896 NYNRINQ9P2P1 1898 aaKnown RBP9.23□□□□□ -0.93
GGA3-207ENST00000578896 IGSF10Q6WRI0 2623 aa9.23□□□□□ -0.93
GGA3-207ENST00000578896 LOC400499M0QZD8 3231 aa9.23□□□□□ -0.93
GGA3-207ENST00000578896 TYW5A2RUC4 315 aaKnown RBP9.23□□□□□ -0.93
GGA3-207ENST00000578896 APOEP02649 317 aa9.23□□□□□ -0.93
GGA3-207ENST00000578896 ASLP04424 464 aa9.23□□□□□ -0.93
GGA3-207ENST00000578896 ZNF883P0CG24 379 aa9.23□□□□□ -0.93
GGA3-207ENST00000578896 PNMA6AP0CW24 399 aaPredicted RBP9.23□□□□□ -0.93
GGA3-207ENST00000578896 CTSKP43235 329 aa9.23□□□□□ -0.93
GGA3-207ENST00000578896 ACADSBP45954 432 aa9.23□□□□□ -0.93
GGA3-207ENST00000578896 ECT2LQ008S8 904 aa9.23□□□□□ -0.93
GGA3-207ENST00000578896 CENPCQ03188 943 aa9.23□□□□□ -0.93
GGA3-207ENST00000578896 ZBTB16Q05516 673 aa9.23□□□□□ -0.93
GGA3-207ENST00000578896 PDCLQ13371 301 aa9.23□□□□□ -0.93
GGA3-207ENST00000578896 KCNJ12Q14500 433 aa9.23□□□□□ -0.93
GGA3-207ENST00000578896 TEAD4Q15561 434 aa9.23□□□□□ -0.93
GGA3-207ENST00000578896 POM121L1PQ3SYA9 428 aa9.23□□□□□ -0.93
GGA3-207ENST00000578896 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP9.23□□□□□ -0.93
GGA3-207ENST00000578896 DBX2Q6ZNG2 339 aa9.23□□□□□ -0.93
GGA3-207ENST00000578896 C14orf80Q86SX3 495 aa9.23□□□□□ -0.93
GGA3-207ENST00000578896 TMEM110Q86TL2 294 aa9.23□□□□□ -0.93
GGA3-207ENST00000578896 PROSER1Q86XN7 944 aa9.23□□□□□ -0.93
GGA3-207ENST00000578896 CCDC117Q8IWD4 279 aaPredicted RBP9.23□□□□□ -0.93
GGA3-207ENST00000578896 ELOA2Q8IYF1 753 aaPredicted RBP9.23□□□□□ -0.93
GGA3-207ENST00000578896 AADATQ8N5Z0 425 aa9.23□□□□□ -0.93
GGA3-207ENST00000578896 OR52K2Q8NGK3 314 aa9.23□□□□□ -0.93
GGA3-207ENST00000578896 OR14C36Q8NHC7 312 aa9.23□□□□□ -0.93
GGA3-207ENST00000578896 PTPRN2Q92932 1015 aa9.23□□□□□ -0.93
GGA3-207ENST00000578896 RNF34Q969K3 372 aa9.23□□□□□ -0.93
GGA3-207ENST00000578896 IGSF8Q969P0 613 aa9.23□□□□□ -0.93
GGA3-207ENST00000578896 CPXM1Q96SM3 734 aa9.23□□□□□ -0.93
GGA3-207ENST00000578896 OMDQ99983 421 aa9.23□□□□□ -0.93
GGA3-207ENST00000578896 PCED1AQ9H1Q7 454 aa9.23□□□□□ -0.93
GGA3-207ENST00000578896 CAAP1Q9H8G2 361 aa9.23□□□□□ -0.93
GGA3-207ENST00000578896 FAM204AQ9H8W3 233 aa9.23□□□□□ -0.93
GGA3-207ENST00000578896 FBRSQ9HAH7 460 aa9.23□□□□□ -0.93
GGA3-207ENST00000578896 POPDC2Q9HBU9 364 aa9.23□□□□□ -0.93
GGA3-207ENST00000578896 PLCB1Q9NQ66 1216 aa9.23□□□□□ -0.93
GGA3-207ENST00000578896 AASDHPPTQ9NRN7 309 aa9.23□□□□□ -0.93
GGA3-207ENST00000578896 KIAA1522Q9P206 1035 aaPredicted RBP9.23□□□□□ -0.93
GGA3-207ENST00000578896 MYLKQ15746 1914 aa9.23□□□□□ -0.93
GGA3-207ENST00000578896 A0A1W2PPC4 97 aa9.22□□□□□ -0.93
GGA3-207ENST00000578896 KCNU1A8MYU2 1149 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms