RNA–Protein interactions for RNA: ENST00000578430.1

SRSF1-202, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 2

Gene SRSF1, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-202ENST00000578430 MFSD11O43934 449 aa13.8□□□□□ -0.2
SRSF1-202ENST00000578430 CLDN11O75508 207 aa13.8□□□□□ -0.2
SRSF1-202ENST00000578430 GGCXP38435 758 aa13.8□□□□□ -0.2
SRSF1-202ENST00000578430 PTGIRP43119 386 aa13.8□□□□□ -0.2
SRSF1-202ENST00000578430 ATP5OP48047 213 aa13.8□□□□□ -0.2
SRSF1-202ENST00000578430 NDST2P52849 883 aa13.8□□□□□ -0.2
SRSF1-202ENST00000578430 CDH4P55283 916 aa13.8□□□□□ -0.2
SRSF1-202ENST00000578430 ZXDBP98169 803 aa13.8□□□□□ -0.2
SRSF1-202ENST00000578430 USP4Q13107 963 aa13.8□□□□□ -0.2
SRSF1-202ENST00000578430 SNX1Q13596 522 aa13.8□□□□□ -0.2
SRSF1-202ENST00000578430 ERCC6LQ2NKX8 1250 aa13.8□□□□□ -0.2
SRSF1-202ENST00000578430 SLC45A4Q5BKX6 768 aa13.8□□□□□ -0.2
SRSF1-202ENST00000578430 MPP7Q5T2T1 576 aa13.8□□□□□ -0.2
SRSF1-202ENST00000578430 NPNTQ6UXI9 565 aa13.8□□□□□ -0.2
SRSF1-202ENST00000578430 CHST9Q7L1S5 443 aa13.8□□□□□ -0.2
SRSF1-202ENST00000578430 UMODL1-AS1Q8N2C9 162 aa13.8□□□□□ -0.2
SRSF1-202ENST00000578430 CELF5Q8N6W0 485 aaKnown RBP13.8□□□□□ -0.2
SRSF1-202ENST00000578430 ITFG1Q8TB96 612 aa13.8□□□□□ -0.2
SRSF1-202ENST00000578430 USP13Q92995 863 aaPredicted RBP13.8□□□□□ -0.2
SRSF1-202ENST00000578430 OTUB2Q96DC9 234 aa13.8□□□□□ -0.2
SRSF1-202ENST00000578430 PABPC5Q96DU9 382 aaKnown RBP13.8□□□□□ -0.2
SRSF1-202ENST00000578430 CCDC114Q96M63 670 aa13.8□□□□□ -0.2
SRSF1-202ENST00000578430 OBP2AQ9NY56 170 aa13.8□□□□□ -0.2
SRSF1-202ENST00000578430 CLEC1BQ9P126 229 aa13.8□□□□□ -0.2
SRSF1-202ENST00000578430 SAE1Q9UBE0 346 aaPredicted RBP13.8□□□□□ -0.2
SRSF1-202ENST00000578430 UTP11Q9Y3A2 253 aaKnown RBP13.8□□□□□ -0.2
SRSF1-202ENST00000578430 ZFP37Q9Y6Q3 630 aaPredicted RBP13.8□□□□□ -0.2
SRSF1-202ENST00000578430 GOLGA6L7A0A1B0GV03 622 aa13.79□□□□□ -0.2
SRSF1-202ENST00000578430 A0A1B0GVM2 712 aa13.79□□□□□ -0.2
SRSF1-202ENST00000578430 TCAF2A6NFQ2 919 aa13.79□□□□□ -0.2
SRSF1-202ENST00000578430 SLC9A3R1O14745 358 aaPredicted RBP13.79□□□□□ -0.2
SRSF1-202ENST00000578430 NDC80O14777 642 aa13.79□□□□□ -0.2
SRSF1-202ENST00000578430 MTSS1O43312 755 aa13.79□□□□□ -0.2
SRSF1-202ENST00000578430 RHOXF2BP0C7M4 288 aa13.79□□□□□ -0.2
SRSF1-202ENST00000578430 SLC6A4P31645 630 aa13.79□□□□□ -0.2
SRSF1-202ENST00000578430 KCNJ1P48048 391 aa13.79□□□□□ -0.2
SRSF1-202ENST00000578430 DRG2P55039 364 aaKnown RBP13.79□□□□□ -0.2
SRSF1-202ENST00000578430 YBEYP58557 167 aaPredicted RBP13.79□□□□□ -0.2
SRSF1-202ENST00000578430 GALNT2Q10471 571 aa13.79□□□□□ -0.2
SRSF1-202ENST00000578430 SLC10A2Q12908 348 aaPredicted RBP13.79□□□□□ -0.2
SRSF1-202ENST00000578430 ADGRE1Q14246 886 aa13.79□□□□□ -0.2
SRSF1-202ENST00000578430 PPP1R7Q15435 360 aa13.79□□□□□ -0.2
SRSF1-202ENST00000578430 ZNF77Q15935 545 aa13.79□□□□□ -0.2
SRSF1-202ENST00000578430 AFMIDQ63HM1 303 aa13.79□□□□□ -0.2
SRSF1-202ENST00000578430 DARS2Q6PI48 645 aaKnown RBP13.79□□□□□ -0.2
SRSF1-202ENST00000578430 C4orf22Q6V702 233 aa13.79□□□□□ -0.2
SRSF1-202ENST00000578430 GSTA5Q7RTV2 222 aa13.79□□□□□ -0.2
SRSF1-202ENST00000578430 JAMLQ86YT9 394 aa13.79□□□□□ -0.2
SRSF1-202ENST00000578430 ARID3BQ8IVW6 561 aaPredicted RBP13.79□□□□□ -0.2
SRSF1-202ENST00000578430 NPAS3Q8IXF0 933 aa13.79□□□□□ -0.2
SRSF1-202ENST00000578430 ALLCQ8N6M5 410 aa13.79□□□□□ -0.2
SRSF1-202ENST00000578430 CCDC89Q8N998 374 aa13.79□□□□□ -0.2
SRSF1-202ENST00000578430 HJURPQ8NCD3 748 aaPredicted RBP13.79□□□□□ -0.2
SRSF1-202ENST00000578430 ZSCAN18Q8TBC5 510 aaPredicted RBP13.79□□□□□ -0.2
SRSF1-202ENST00000578430 TFB1MQ8WVM0 346 aaKnown RBP13.79□□□□□ -0.2
SRSF1-202ENST00000578430 RSAD2Q8WXG1 361 aa13.79□□□□□ -0.2
SRSF1-202ENST00000578430 IGSF8Q969P0 613 aa13.79□□□□□ -0.2
SRSF1-202ENST00000578430 WBP2Q969T9 261 aa13.79□□□□□ -0.2
SRSF1-202ENST00000578430 E2F7Q96AV8 911 aa13.79□□□□□ -0.2
SRSF1-202ENST00000578430 HDAC11Q96DB2 347 aa13.79□□□□□ -0.2
SRSF1-202ENST00000578430 RTP4Q96DX8 246 aa13.79□□□□□ -0.2
SRSF1-202ENST00000578430 NECTIN4Q96NY8 510 aa13.79□□□□□ -0.2
SRSF1-202ENST00000578430 QKIQ96PU8 341 aaKnown RBP eCLIP13.79□□□□□ -0.2
SRSF1-202ENST00000578430 RHOXF2Q9BQY4 288 aa13.79□□□□□ -0.2
SRSF1-202ENST00000578430 KLC2Q9H0B6 622 aa13.79□□□□□ -0.2
SRSF1-202ENST00000578430 S1PR5Q9H228 398 aa13.79□□□□□ -0.2
SRSF1-202ENST00000578430 TRPV4Q9HBA0 871 aa13.79□□□□□ -0.2
SRSF1-202ENST00000578430 CLDND1Q9NY35 253 aa13.79□□□□□ -0.2
SRSF1-202ENST00000578430 DOCK6Q96HP0 2047 aa13.79□□□□□ -0.2
SRSF1-202ENST00000578430 REV3LO60673 3130 aa13.79□□□□□ -0.2
SRSF1-202ENST00000578430 TTC28Q96AY4 2481 aa13.79□□□□□ -0.2
SRSF1-202ENST00000578430 UQCRHLA0A096LP55 91 aa13.78□□□□□ -0.2
SRSF1-202ENST00000578430 TTI1O43156 1089 aa13.78□□□□□ -0.2
SRSF1-202ENST00000578430 HEXIM1O94992 359 aaKnown RBP13.78□□□□□ -0.2
SRSF1-202ENST00000578430 UQCRHP07919 91 aa13.78□□□□□ -0.2
SRSF1-202ENST00000578430 IGFBP4P22692 258 aa13.78□□□□□ -0.2
SRSF1-202ENST00000578430 ETFBP38117 255 aa13.78□□□□□ -0.2
SRSF1-202ENST00000578430 PTK6Q13882 451 aa13.78□□□□□ -0.2
SRSF1-202ENST00000578430 PARP15Q460N3 678 aa13.78□□□□□ -0.2
SRSF1-202ENST00000578430 MPPE1Q53F39 396 aa13.78□□□□□ -0.2
SRSF1-202ENST00000578430 TJAP1Q5JTD0 557 aa13.78□□□□□ -0.2
SRSF1-202ENST00000578430 WDR93Q6P2C0 686 aa13.78□□□□□ -0.2
SRSF1-202ENST00000578430 RFWD3Q6PCD5 774 aa13.78□□□□□ -0.2
SRSF1-202ENST00000578430 ZNF783Q6ZMS7 281 aa13.78□□□□□ -0.2
SRSF1-202ENST00000578430 SETD3Q86TU7 594 aaPredicted RBP13.78□□□□□ -0.2
SRSF1-202ENST00000578430 ZC3H18Q86VM9 953 aaKnown RBP13.78□□□□□ -0.2
SRSF1-202ENST00000578430 IFT20Q8IY31 132 aa13.78□□□□□ -0.2
SRSF1-202ENST00000578430 EIF1ADQ8N9N8 165 aaKnown RBP13.78□□□□□ -0.2
SRSF1-202ENST00000578430 PPM1EQ8WY54 764 aa13.78□□□□□ -0.2
SRSF1-202ENST00000578430 ING5Q8WYH8 240 aa13.78□□□□□ -0.2
SRSF1-202ENST00000578430 SEC14L1Q92503 715 aa13.78□□□□□ -0.2
SRSF1-202ENST00000578430 FGF13Q92913 245 aa13.78□□□□□ -0.2
SRSF1-202ENST00000578430 SMARCD2Q92925 531 aa13.78□□□□□ -0.2
SRSF1-202ENST00000578430 FATE1Q969F0 183 aa13.78□□□□□ -0.2
SRSF1-202ENST00000578430 TMA16Q96EY4 203 aaKnown RBP13.78□□□□□ -0.2
SRSF1-202ENST00000578430 MSLNLQ96KJ4 702 aa13.78□□□□□ -0.2
SRSF1-202ENST00000578430 ZSWIM3Q96MP5 696 aa13.78□□□□□ -0.2
SRSF1-202ENST00000578430 TSGA13Q96PP4 275 aa13.78□□□□□ -0.2
SRSF1-202ENST00000578430 FAM118BQ9BPY3 351 aa13.78□□□□□ -0.2
SRSF1-202ENST00000578430 ERP44Q9BS26 406 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 90.3 ms