RNA–Protein interactions for RNA: ENST00000577824.5

MKS1-206, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5

Gene MKS1, Length 1,158 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-206ENST00000577824 EPHB2P29323 1055 aa13.07□□□□□ -0.32
MKS1-206ENST00000577824 HLA-FP30511 346 aa13.07□□□□□ -0.32
MKS1-206ENST00000577824 PTPN7P35236 360 aa13.07□□□□□ -0.32
MKS1-206ENST00000577824 ARL4AP40617 200 aa13.07□□□□□ -0.32
MKS1-206ENST00000577824 SSR1P43307 286 aaKnown RBP13.07□□□□□ -0.32
MKS1-206ENST00000577824 SOX9P48436 509 aa13.07□□□□□ -0.32
MKS1-206ENST00000577824 CDH6P55285 790 aa13.07□□□□□ -0.32
MKS1-206ENST00000577824 OXCT1P55809 520 aa13.07□□□□□ -0.32
MKS1-206ENST00000577824 SLC12A1Q13621 1099 aa13.07□□□□□ -0.32
MKS1-206ENST00000577824 PREPLQ4J6C6 727 aaPredicted RBP13.07□□□□□ -0.32
MKS1-206ENST00000577824 PPP6R3Q5H9R7 873 aaPredicted RBP13.07□□□□□ -0.32
MKS1-206ENST00000577824 TMEM196Q5HYL7 178 aa13.07□□□□□ -0.32
MKS1-206ENST00000577824 MEI1Q5TIA1 1274 aa13.07□□□□□ -0.32
MKS1-206ENST00000577824 ZNF783Q6ZMS7 281 aa13.07□□□□□ -0.32
MKS1-206ENST00000577824 CIR1Q86X95 450 aaPredicted RBP13.07□□□□□ -0.32
MKS1-206ENST00000577824 MFN1Q8IWA4 741 aa13.07□□□□□ -0.32
MKS1-206ENST00000577824 MAP7D3Q8IWC1 876 aa13.07□□□□□ -0.32
MKS1-206ENST00000577824 CFAP52Q8N1V2 620 aa13.07□□□□□ -0.32
MKS1-206ENST00000577824 TERB1Q8NA31 727 aa13.07□□□□□ -0.32
MKS1-206ENST00000577824 EXD1Q8NHP7 514 aa13.07□□□□□ -0.32
MKS1-206ENST00000577824 RAPGEF5Q92565 580 aa13.07□□□□□ -0.32
MKS1-206ENST00000577824 ALG3Q92685 438 aa13.07□□□□□ -0.32
MKS1-206ENST00000577824 EXOC4Q96A65 974 aa13.07□□□□□ -0.32
MKS1-206ENST00000577824 CATSPERBQ9H7T0 1116 aa13.07□□□□□ -0.32
MKS1-206ENST00000577824 PRDM16Q9HAZ2 1276 aa13.07□□□□□ -0.32
MKS1-206ENST00000577824 ARHGEF4Q9NR80 690 aa13.07□□□□□ -0.32
MKS1-206ENST00000577824 DNAJC17Q9NVM6 304 aaKnown RBP13.07□□□□□ -0.32
MKS1-206ENST00000577824 DONSONQ9NYP3 566 aa13.07□□□□□ -0.32
MKS1-206ENST00000577824 MPP6Q9NZW5 540 aa13.07□□□□□ -0.32
MKS1-206ENST00000577824 CLEC4EQ9ULY5 219 aa13.07□□□□□ -0.32
MKS1-206ENST00000577824 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.07□□□□□ -0.32
MKS1-206ENST00000577824 MYO10Q9HD67 2058 aa13.07□□□□□ -0.32
MKS1-206ENST00000577824 CXorf51AA0A1B0GTR3 108 aa13.06□□□□□ -0.32
MKS1-206ENST00000577824 SRGAP2O75044 1071 aa13.06□□□□□ -0.32
MKS1-206ENST00000577824 KRT1P04264 644 aa13.06□□□□□ -0.32
MKS1-206ENST00000577824 CD48P09326 243 aa13.06□□□□□ -0.32
MKS1-206ENST00000577824 GJC1P36383 396 aa13.06□□□□□ -0.32
MKS1-206ENST00000577824 CDKN2BP42772 138 aa13.06□□□□□ -0.32
MKS1-206ENST00000577824 DGKGP49619 791 aa13.06□□□□□ -0.32
MKS1-206ENST00000577824 PLK1P53350 603 aa13.06□□□□□ -0.32
MKS1-206ENST00000577824 COPS2P61201 443 aa13.06□□□□□ -0.32
MKS1-206ENST00000577824 MESP2Q0VG99 397 aa13.06□□□□□ -0.32
MKS1-206ENST00000577824 CDH18Q13634 790 aa13.06□□□□□ -0.32
MKS1-206ENST00000577824 PPP2R5EQ16537 467 aa13.06□□□□□ -0.32
MKS1-206ENST00000577824 C6orf118Q5T5N4 469 aa13.06□□□□□ -0.32
MKS1-206ENST00000577824 AFMIDQ63HM1 303 aa13.06□□□□□ -0.32
MKS1-206ENST00000577824 NAIF1Q69YI7 327 aaPredicted RBP13.06□□□□□ -0.32
MKS1-206ENST00000577824 ASTLQ6HA08 431 aaPredicted RBP13.06□□□□□ -0.32
MKS1-206ENST00000577824 GRAMD4Q6IC98 578 aa13.06□□□□□ -0.32
MKS1-206ENST00000577824 TPRG1Q6ZUI0 275 aa13.06□□□□□ -0.32
MKS1-206ENST00000577824 UMODL1-AS1Q8N2C9 162 aa13.06□□□□□ -0.32
MKS1-206ENST00000577824 UBL4BQ8N7F7 174 aa13.06□□□□□ -0.32
MKS1-206ENST00000577824 KCTD6Q8NC69 237 aa13.06□□□□□ -0.32
MKS1-206ENST00000577824 TTC8Q8TAM2 541 aa13.06□□□□□ -0.32
MKS1-206ENST00000577824 BHMTQ93088 406 aa13.06□□□□□ -0.32
MKS1-206ENST00000577824 ALG14Q96F25 216 aa13.06□□□□□ -0.32
MKS1-206ENST00000577824 SHDQ96IW2 340 aa13.06□□□□□ -0.32
MKS1-206ENST00000577824 RBM41Q96IZ5 413 aaKnown RBP13.06□□□□□ -0.32
MKS1-206ENST00000577824 P2RY13Q9BPV8 354 aa13.06□□□□□ -0.32
MKS1-206ENST00000577824 KLC2Q9H0B6 622 aa13.06□□□□□ -0.32
MKS1-206ENST00000577824 KLHL11Q9NVR0 708 aa13.06□□□□□ -0.32
MKS1-206ENST00000577824 TRMT1Q9NXH9 659 aaKnown RBP13.06□□□□□ -0.32
MKS1-206ENST00000577824 DEC1Q9P2X7 70 aa13.06□□□□□ -0.32
MKS1-206ENST00000577824 EFR3BQ9Y2G0 817 aa13.06□□□□□ -0.32
MKS1-206ENST00000577824 OR51B4Q9Y5P0 310 aa13.06□□□□□ -0.32
MKS1-206ENST00000577824 ILVBLA1L0T0 632 aa13.05□□□□□ -0.32
MKS1-206ENST00000577824 LRRD1A4D1F6 860 aa13.05□□□□□ -0.32
MKS1-206ENST00000577824 PI4K2BG5E9Z4 385 aa13.05□□□□□ -0.32
MKS1-206ENST00000577824 KIF5CO60282 957 aa13.05□□□□□ -0.32
MKS1-206ENST00000577824 ALADP13716 330 aa13.05□□□□□ -0.32
MKS1-206ENST00000577824 ERCC2P18074 760 aa13.05□□□□□ -0.32
MKS1-206ENST00000577824 DRD1P21728 446 aa13.05□□□□□ -0.32
MKS1-206ENST00000577824 SLC6A11P48066 632 aa13.05□□□□□ -0.32
MKS1-206ENST00000577824 RWDD2BP57060 319 aa13.05□□□□□ -0.32
MKS1-206ENST00000577824 LMAN2Q12907 356 aa13.05□□□□□ -0.32
MKS1-206ENST00000577824 CCINQ13939 588 aa13.05□□□□□ -0.32
MKS1-206ENST00000577824 KRT81Q14533 505 aa13.05□□□□□ -0.32
MKS1-206ENST00000577824 EIF4HQ15056 248 aaKnown RBP13.05□□□□□ -0.32
MKS1-206ENST00000577824 FSCBQ5H9T9 825 aa13.05□□□□□ -0.32
MKS1-206ENST00000577824 DCAF12L1Q5VU92 463 aa13.05□□□□□ -0.32
MKS1-206ENST00000577824 SLC9A4Q6AI14 798 aa13.05□□□□□ -0.32
MKS1-206ENST00000577824 RWDD4Q6NW29 188 aaKnown RBP13.05□□□□□ -0.32
MKS1-206ENST00000577824 ZNF852Q6ZMS4 543 aa13.05□□□□□ -0.32
MKS1-206ENST00000577824 ANKS1BQ7Z6G8 1248 aa13.05□□□□□ -0.32
MKS1-206ENST00000577824 TFAP2DQ7Z6R9 452 aa13.05□□□□□ -0.32
MKS1-206ENST00000577824 AHI1Q8N157 1196 aa13.05□□□□□ -0.32
MKS1-206ENST00000577824 OR52K2Q8NGK3 314 aa13.05□□□□□ -0.32
MKS1-206ENST00000577824 PCDH19Q8TAB3 1148 aa13.05□□□□□ -0.32
MKS1-206ENST00000577824 WFIKKN2Q8TEU8 576 aa13.05□□□□□ -0.32
MKS1-206ENST00000577824 FAM3CQ92520 227 aa13.05□□□□□ -0.32
MKS1-206ENST00000577824 EZH1Q92800 747 aaPredicted RBP13.05□□□□□ -0.32
MKS1-206ENST00000577824 TRIM44Q96DX7 344 aaPredicted RBP13.05□□□□□ -0.32
MKS1-206ENST00000577824 PNKPQ96T60 521 aa13.05□□□□□ -0.32
MKS1-206ENST00000577824 TLR10Q9BXR5 811 aa13.05□□□□□ -0.32
MKS1-206ENST00000577824 OSBPL6Q9BZF3 934 aa13.05□□□□□ -0.32
MKS1-206ENST00000577824 LRRC19Q9H756 370 aa13.05□□□□□ -0.32
MKS1-206ENST00000577824 NDFIP2Q9NV92 336 aa13.05□□□□□ -0.32
MKS1-206ENST00000577824 GGA2Q9UJY4 613 aa13.05□□□□□ -0.32
MKS1-206ENST00000577824 CA14Q9ULX7 337 aa13.05□□□□□ -0.32
MKS1-206ENST00000577824 PACSIN2Q9UNF0 486 aaPredicted RBP13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms