RNA–Protein interactions for RNA: ENST00000577664.5

CDK5RAP3-204, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 568 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-204ENST00000577664 MYADMQ96S97 322 aa11.51□□□□□ -0.57
CDK5RAP3-204ENST00000577664 SNRNP25Q9BV90 132 aaKnown RBP11.51□□□□□ -0.57
CDK5RAP3-204ENST00000577664 OSBPL6Q9BZF3 934 aa11.51□□□□□ -0.57
CDK5RAP3-204ENST00000577664 CARD9Q9H257 536 aa11.51□□□□□ -0.57
CDK5RAP3-204ENST00000577664 TRPC7Q9HCX4 862 aa11.51□□□□□ -0.57
CDK5RAP3-204ENST00000577664 SLC2A4RGQ9NR83 387 aa11.51□□□□□ -0.57
CDK5RAP3-204ENST00000577664 RXFP3Q9NSD7 469 aa11.51□□□□□ -0.57
CDK5RAP3-204ENST00000577664 TBC1D14Q9P2M4 693 aa11.51□□□□□ -0.57
CDK5RAP3-204ENST00000577664 OR12D3Q9UGF7 316 aa11.51□□□□□ -0.57
CDK5RAP3-204ENST00000577664 PCSK1NQ9UHG2 260 aa11.51□□□□□ -0.57
CDK5RAP3-204ENST00000577664 AGO1Q9UL18 857 aaKnown RBP11.51□□□□□ -0.57
CDK5RAP3-204ENST00000577664 CCL26Q9Y258 94 aa11.51□□□□□ -0.57
CDK5RAP3-204ENST00000577664 PAGE1O75459 146 aa11.5□□□□□ -0.57
CDK5RAP3-204ENST00000577664 ZRANB2O95218 330 aaKnown RBP eCLIP11.5□□□□□ -0.577e-19■□□□□ 10
CDK5RAP3-204ENST00000577664 PRAMEF12O95522 483 aa11.5□□□□□ -0.57
CDK5RAP3-204ENST00000577664 FTCDO95954 541 aa11.5□□□□□ -0.57
CDK5RAP3-204ENST00000577664 KDELR1P24390 212 aa11.5□□□□□ -0.57
CDK5RAP3-204ENST00000577664 CHKAP35790 457 aa11.5□□□□□ -0.57
CDK5RAP3-204ENST00000577664 RWDD2BP57060 319 aa11.5□□□□□ -0.57
CDK5RAP3-204ENST00000577664 RPS6KA1Q15418 735 aa11.5□□□□□ -0.57
CDK5RAP3-204ENST00000577664 ATP13A4Q4VNC1 1196 aa11.5□□□□□ -0.57
CDK5RAP3-204ENST00000577664 FAM133BQ5BKY9 247 aaKnown RBP11.5□□□□□ -0.57
CDK5RAP3-204ENST00000577664 MS4A13Q5J8X5 152 aa11.5□□□□□ -0.57
CDK5RAP3-204ENST00000577664 DAB2IPQ5VWQ8 1189 aa11.5□□□□□ -0.57
CDK5RAP3-204ENST00000577664 IL31Q6EBC2 164 aa11.5□□□□□ -0.57
CDK5RAP3-204ENST00000577664 SCYL2Q6P3W7 929 aa11.5□□□□□ -0.57
CDK5RAP3-204ENST00000577664 MTSS1LQ765P7 747 aa11.5□□□□□ -0.57
CDK5RAP3-204ENST00000577664 MAP7D3Q8IWC1 876 aa11.5□□□□□ -0.57
CDK5RAP3-204ENST00000577664 MFSD6LQ8IWD5 586 aa11.5□□□□□ -0.57
CDK5RAP3-204ENST00000577664 RIN3Q8TB24 985 aa11.5□□□□□ -0.57
CDK5RAP3-204ENST00000577664 SH3RF2Q8TEC5 729 aa11.5□□□□□ -0.57
CDK5RAP3-204ENST00000577664 RSAD2Q8WXG1 361 aa11.5□□□□□ -0.57
CDK5RAP3-204ENST00000577664 ING5Q8WYH8 240 aa11.5□□□□□ -0.57
CDK5RAP3-204ENST00000577664 ALG3Q92685 438 aa11.5□□□□□ -0.57
CDK5RAP3-204ENST00000577664 KRT35Q92764 455 aa11.5□□□□□ -0.57
CDK5RAP3-204ENST00000577664 GATA6Q92908 595 aa11.5□□□□□ -0.57
CDK5RAP3-204ENST00000577664 WBP2Q969T9 261 aa11.5□□□□□ -0.57
CDK5RAP3-204ENST00000577664 LRRC3BQ96PB8 259 aa11.5□□□□□ -0.57
CDK5RAP3-204ENST00000577664 DDX50Q9BQ39 737 aaKnown RBP11.5□□□□□ -0.57
CDK5RAP3-204ENST00000577664 FOXQ1Q9C009 403 aa11.5□□□□□ -0.57
CDK5RAP3-204ENST00000577664 ZFP14Q9HCL3 533 aa11.5□□□□□ -0.57
CDK5RAP3-204ENST00000577664 SPATA6Q9NWH7 488 aaPredicted RBP11.5□□□□□ -0.57
CDK5RAP3-204ENST00000577664 TTC7AQ9ULT0 858 aaPredicted RBP11.5□□□□□ -0.57
CDK5RAP3-204ENST00000577664 AP4E1Q9UPM8 1137 aa11.5□□□□□ -0.57
CDK5RAP3-204ENST00000577664 HYOU1Q9Y4L1 999 aa11.5□□□□□ -0.57
CDK5RAP3-204ENST00000577664 HS3ST4Q9Y661 456 aa11.5□□□□□ -0.57
CDK5RAP3-204ENST00000577664 HELZP42694 1942 aaKnown RBP11.5□□□□□ -0.57
CDK5RAP3-204ENST00000577664 TMEM110-MUSTN1A8MSY1 372 aa11.49□□□□□ -0.57
CDK5RAP3-204ENST00000577664 WASH4PA8MWX3 477 aa11.49□□□□□ -0.57
CDK5RAP3-204ENST00000577664 SLC9A3R1O14745 358 aaPredicted RBP11.49□□□□□ -0.57
CDK5RAP3-204ENST00000577664 CORO1AP31146 461 aaKnown RBP11.49□□□□□ -0.57
CDK5RAP3-204ENST00000577664 AMPD2Q01433 879 aa11.49□□□□□ -0.57
CDK5RAP3-204ENST00000577664 AUHQ13825 339 aaKnown RBP11.49□□□□□ -0.57
CDK5RAP3-204ENST00000577664 PPP2R5EQ16537 467 aa11.49□□□□□ -0.57
CDK5RAP3-204ENST00000577664 EFHC2Q5JST6 749 aa11.49□□□□□ -0.57
CDK5RAP3-204ENST00000577664 KCNT1Q5JUK3 1230 aa11.49□□□□□ -0.57
CDK5RAP3-204ENST00000577664 PIK3R6Q5UE93 754 aa11.49□□□□□ -0.57
CDK5RAP3-204ENST00000577664 NADSYN1Q6IA69 706 aa11.49□□□□□ -0.57
CDK5RAP3-204ENST00000577664 TANGO2Q6ICL3 276 aa11.49□□□□□ -0.57
CDK5RAP3-204ENST00000577664 GET4Q7L5D6 327 aaPredicted RBP11.49□□□□□ -0.57
CDK5RAP3-204ENST00000577664 RASGEF1CQ8N431 466 aa11.49□□□□□ -0.57
CDK5RAP3-204ENST00000577664 BPIFB1Q8TDL5 484 aa11.49□□□□□ -0.57
CDK5RAP3-204ENST00000577664 DEPDC1BQ8WUY9 529 aa11.49□□□□□ -0.57
CDK5RAP3-204ENST00000577664 RAPGEF5Q92565 580 aa11.49□□□□□ -0.57
CDK5RAP3-204ENST00000577664 RNF34Q969K3 372 aa11.49□□□□□ -0.57
CDK5RAP3-204ENST00000577664 RSPRY1Q96DX4 576 aa11.49□□□□□ -0.57
CDK5RAP3-204ENST00000577664 SHDQ96IW2 340 aa11.49□□□□□ -0.57
CDK5RAP3-204ENST00000577664 RBM41Q96IZ5 413 aaKnown RBP11.49□□□□□ -0.57
CDK5RAP3-204ENST00000577664 PBKQ96KB5 322 aa11.49□□□□□ -0.57
CDK5RAP3-204ENST00000577664 NAPGQ99747 312 aaPredicted RBP11.49□□□□□ -0.57
CDK5RAP3-204ENST00000577664 FAM83CQ9BQN1 747 aa11.49□□□□□ -0.57
CDK5RAP3-204ENST00000577664 ZNF670Q9BS34 389 aa11.49□□□□□ -0.57
CDK5RAP3-204ENST00000577664 SLITRK6Q9H5Y7 841 aa11.49□□□□□ -0.57
CDK5RAP3-204ENST00000577664 PRMT8Q9NR22 394 aaPredicted RBP11.49□□□□□ -0.57
CDK5RAP3-204ENST00000577664 CFAP97Q9P2B7 532 aa11.49□□□□□ -0.57
CDK5RAP3-204ENST00000577664 LSM7Q9UK45 103 aaKnown RBP11.49□□□□□ -0.57
CDK5RAP3-204ENST00000577664 SNX12Q9UMY4 172 aa11.49□□□□□ -0.57
CDK5RAP3-204ENST00000577664 NEU3Q9UQ49 428 aa11.49□□□□□ -0.57
CDK5RAP3-204ENST00000577664 SH3BP1Q9Y3L3 701 aa11.49□□□□□ -0.57
CDK5RAP3-204ENST00000577664 COL4A3Q01955 1670 aa11.49□□□□□ -0.57
CDK5RAP3-204ENST00000577664 SYNJ2BP-COX16A0A087WUM0 186 aa11.48□□□□□ -0.57
CDK5RAP3-204ENST00000577664 KANSL1LA0AUZ9 987 aa11.48□□□□□ -0.57
CDK5RAP3-204ENST00000577664 CTAGE9A4FU28 777 aa11.48□□□□□ -0.57
CDK5RAP3-204ENST00000577664 HEPACAM2A8MVW5 462 aa11.48□□□□□ -0.57
CDK5RAP3-204ENST00000577664 FAM72CH0Y354 149 aa11.48□□□□□ -0.57
CDK5RAP3-204ENST00000577664 ATP1A1P05023 1023 aaKnown RBP11.48□□□□□ -0.57
CDK5RAP3-204ENST00000577664 PYGMP11217 842 aa11.48□□□□□ -0.57
CDK5RAP3-204ENST00000577664 TCP1P17987 556 aaKnown RBP11.48□□□□□ -0.57
CDK5RAP3-204ENST00000577664 CDKN2BP42772 138 aa11.48□□□□□ -0.57
CDK5RAP3-204ENST00000577664 TUBB2AQ13885 445 aa11.48□□□□□ -0.57
CDK5RAP3-204ENST00000577664 DPYSQ14117 519 aa11.48□□□□□ -0.57
CDK5RAP3-204ENST00000577664 DPYSL3Q14195 570 aa11.48□□□□□ -0.57
CDK5RAP3-204ENST00000577664 CA9Q16790 459 aa11.48□□□□□ -0.57
CDK5RAP3-204ENST00000577664 FAM72AQ5TYM5 149 aa11.48□□□□□ -0.57
CDK5RAP3-204ENST00000577664 TTC39BQ5VTQ0 682 aaPredicted RBP11.48□□□□□ -0.57
CDK5RAP3-204ENST00000577664 DCAF12L1Q5VU92 463 aa11.48□□□□□ -0.57
CDK5RAP3-204ENST00000577664 FAM72DQ6L9T8 149 aa11.48□□□□□ -0.57
CDK5RAP3-204ENST00000577664 PRR23BQ6ZRT6 265 aa11.48□□□□□ -0.57
CDK5RAP3-204ENST00000577664 FAM72BQ86X60 149 aa11.48□□□□□ -0.57
CDK5RAP3-204ENST00000577664 LURAP1LQ8IV03 231 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms