RNA–Protein interactions for RNA: ENST00000576708.5

NUP88-212, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-212ENST00000576708 RHOBTB1O94844 696 aa6.57□□□□□ -1.36
NUP88-212ENST00000576708 RTN3O95197 1032 aaPredicted RBP6.57□□□□□ -1.36
NUP88-212ENST00000576708 KAT7O95251 611 aa6.57□□□□□ -1.36
NUP88-212ENST00000576708 KLF8O95600 359 aaPredicted RBP6.57□□□□□ -1.36
NUP88-212ENST00000576708 CAVIN2O95810 425 aa6.57□□□□□ -1.36
NUP88-212ENST00000576708 TGFB1P01137 390 aa6.57□□□□□ -1.36
NUP88-212ENST00000576708 TRIM49P0CI25 452 aa6.57□□□□□ -1.36
NUP88-212ENST00000576708 TRIM49CP0CI26 452 aa6.57□□□□□ -1.36
NUP88-212ENST00000576708 PFKLP17858 780 aa6.57□□□□□ -1.36
NUP88-212ENST00000576708 ADORA2BP29275 332 aa6.57□□□□□ -1.36
NUP88-212ENST00000576708 WASP42768 502 aa6.57□□□□□ -1.36
NUP88-212ENST00000576708 PPP3CCP48454 512 aa6.57□□□□□ -1.36
NUP88-212ENST00000576708 PDE6CP51160 858 aa6.57□□□□□ -1.36
NUP88-212ENST00000576708 SLC5A3P53794 718 aa6.57□□□□□ -1.36
NUP88-212ENST00000576708 MAP3K7CLP57077 242 aa6.57□□□□□ -1.36
NUP88-212ENST00000576708 ELF2Q15723 593 aa6.57□□□□□ -1.36
NUP88-212ENST00000576708 ZACNQ401N2 412 aa6.57□□□□□ -1.36
NUP88-212ENST00000576708 HECTD3Q5T447 861 aa6.57□□□□□ -1.36
NUP88-212ENST00000576708 IL31Q6EBC2 164 aa6.57□□□□□ -1.36
NUP88-212ENST00000576708 LETMD1Q6P1Q0 360 aa6.57□□□□□ -1.36
NUP88-212ENST00000576708 TMEM25Q86YD3 366 aa6.57□□□□□ -1.36
NUP88-212ENST00000576708 BBS7Q8IWZ6 715 aa6.57□□□□□ -1.36
NUP88-212ENST00000576708 MFSD2AQ8NA29 543 aa6.57□□□□□ -1.36
NUP88-212ENST00000576708 IL17RCQ8NAC3 791 aa6.57□□□□□ -1.36
NUP88-212ENST00000576708 MDGA1Q8NFP4 955 aa6.57□□□□□ -1.36
NUP88-212ENST00000576708 BAHD1Q8TBE0 780 aaPredicted RBP6.57□□□□□ -1.36
NUP88-212ENST00000576708 SLC2A14Q8TDB8 520 aa6.57□□□□□ -1.36
NUP88-212ENST00000576708 CPLX3Q8WVH0 158 aa6.57□□□□□ -1.36
NUP88-212ENST00000576708 EXOC4Q96A65 974 aa6.57□□□□□ -1.36
NUP88-212ENST00000576708 SPATA32Q96LK8 384 aa6.57□□□□□ -1.36
NUP88-212ENST00000576708 CEP295NLQ96MC4 621 aa6.57□□□□□ -1.36
NUP88-212ENST00000576708 SLITRK1Q96PX8 696 aa6.57□□□□□ -1.36
NUP88-212ENST00000576708 PNKPQ96T60 521 aa6.57□□□□□ -1.36
NUP88-212ENST00000576708 MMRN2Q9H8L6 949 aa6.57□□□□□ -1.36
NUP88-212ENST00000576708 NMUR1Q9HB89 426 aa6.57□□□□□ -1.36
NUP88-212ENST00000576708 APOBEC3GQ9HC16 384 aaKnown RBP6.57□□□□□ -1.36
NUP88-212ENST00000576708 ARHGEF4Q9NR80 690 aa6.57□□□□□ -1.36
NUP88-212ENST00000576708 VPS45Q9NRW7 570 aa6.57□□□□□ -1.36
NUP88-212ENST00000576708 OSER1Q9NX31 292 aa6.57□□□□□ -1.36
NUP88-212ENST00000576708 EHD2Q9NZN4 543 aa6.57□□□□□ -1.36
NUP88-212ENST00000576708 CGNQ9P2M7 1197 aaKnown RBP6.57□□□□□ -1.36
NUP88-212ENST00000576708 EBF1Q9UH73 591 aa6.57□□□□□ -1.36
NUP88-212ENST00000576708 NUDT5Q9UKK9 219 aa6.57□□□□□ -1.36
NUP88-212ENST00000576708 CFAP45Q9UL16 551 aa6.57□□□□□ -1.36
NUP88-212ENST00000576708 MMP17Q9ULZ9 603 aa6.57□□□□□ -1.36
NUP88-212ENST00000576708 RALGAPA1Q6GYQ0 2036 aa6.56□□□□□ -1.36
NUP88-212ENST00000576708 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa6.56□□□□□ -1.36
NUP88-212ENST00000576708 E2F8A0AVK6 867 aa6.56□□□□□ -1.36
NUP88-212ENST00000576708 BCLAF3A2AJT9 711 aaKnown RBP6.56□□□□□ -1.36
NUP88-212ENST00000576708 PRR19A6NJB7 356 aa6.56□□□□□ -1.36
NUP88-212ENST00000576708 C4orf47A7E2U8 309 aa6.56□□□□□ -1.36
NUP88-212ENST00000576708 HHLA1C9JL84 531 aa6.56□□□□□ -1.36
NUP88-212ENST00000576708 PDXKO00764 312 aa6.56□□□□□ -1.36
NUP88-212ENST00000576708 SLC9A3R1O14745 358 aaPredicted RBP6.56□□□□□ -1.36
NUP88-212ENST00000576708 CYP26A1O43174 497 aa6.56□□□□□ -1.36
NUP88-212ENST00000576708 TULP3O75386 442 aa6.56□□□□□ -1.36
NUP88-212ENST00000576708 ASS1P00966 412 aaKnown RBP6.56□□□□□ -1.36
NUP88-212ENST00000576708 HLA-DRAP01903 254 aa6.56□□□□□ -1.36
NUP88-212ENST00000576708 RPN1P04843 607 aaKnown RBP6.56□□□□□ -1.36
NUP88-212ENST00000576708 APODP05090 189 aa6.56□□□□□ -1.36
NUP88-212ENST00000576708 ZDHHC11BP0C7U3 371 aa6.56□□□□□ -1.36
NUP88-212ENST00000576708 CMA1P23946 247 aa6.56□□□□□ -1.36
NUP88-212ENST00000576708 PIK3CAP42336 1068 aa6.56□□□□□ -1.36
NUP88-212ENST00000576708 KIR2DL1P43626 348 aaPredicted RBP6.56□□□□□ -1.36
NUP88-212ENST00000576708 GCLMP48507 274 aa6.56□□□□□ -1.36
NUP88-212ENST00000576708 DHPSP49366 369 aaPredicted RBP6.56□□□□□ -1.36
NUP88-212ENST00000576708 NDUFA8P51970 172 aa6.56□□□□□ -1.36
NUP88-212ENST00000576708 LIMK1P53667 647 aa6.56□□□□□ -1.36
NUP88-212ENST00000576708 MRPS21P82921 87 aaKnown RBP6.56□□□□□ -1.36
NUP88-212ENST00000576708 GAD2Q05329 585 aa6.56□□□□□ -1.36
NUP88-212ENST00000576708 PPP3CAQ08209 521 aa6.56□□□□□ -1.36
NUP88-212ENST00000576708 COL9A2Q14055 689 aaPredicted RBP6.56□□□□□ -1.36
NUP88-212ENST00000576708 CRY1Q16526 586 aa6.56□□□□□ -1.36
NUP88-212ENST00000576708 SGSM1Q2NKQ1 1148 aa6.56□□□□□ -1.36
NUP88-212ENST00000576708 ANO4Q32M45 955 aa6.56□□□□□ -1.36
NUP88-212ENST00000576708 USP39Q53GS9 565 aaKnown RBP6.56□□□□□ -1.36
NUP88-212ENST00000576708 PMS2CLQ68D20 193 aa6.56□□□□□ -1.36
NUP88-212ENST00000576708 RASSF3Q86WH2 238 aa6.56□□□□□ -1.36
NUP88-212ENST00000576708 MIB1Q86YT6 1006 aa6.56□□□□□ -1.36
NUP88-212ENST00000576708 TMEFF1Q8IYR6 380 aa6.56□□□□□ -1.36
NUP88-212ENST00000576708 CRYBG2Q8N1P7 616 aa6.56□□□□□ -1.36
NUP88-212ENST00000576708 DEFB119Q8N690 84 aa6.56□□□□□ -1.36
NUP88-212ENST00000576708 FAM181AQ8N9Y4 354 aa6.56□□□□□ -1.36
NUP88-212ENST00000576708 PDZD8Q8NEN9 1154 aa6.56□□□□□ -1.36
NUP88-212ENST00000576708 OLIG1Q8TAK6 271 aa6.56□□□□□ -1.36
NUP88-212ENST00000576708 GOLGA5Q8TBA6 731 aa6.56□□□□□ -1.36
NUP88-212ENST00000576708 TAS1R2Q8TE23 839 aa6.56□□□□□ -1.36
NUP88-212ENST00000576708 HMGB4Q8WW32 186 aa6.56□□□□□ -1.36
NUP88-212ENST00000576708 EEF2KMTQ96G04 330 aa6.56□□□□□ -1.36
NUP88-212ENST00000576708 P2RY11Q96G91 374 aa6.56□□□□□ -1.36
NUP88-212ENST00000576708 SMARCD1Q96GM5 515 aa6.56□□□□□ -1.36
NUP88-212ENST00000576708 SEC16BQ96JE7 1060 aa6.56□□□□□ -1.36
NUP88-212ENST00000576708 TNIP3Q96KP6 325 aa6.56□□□□□ -1.36
NUP88-212ENST00000576708 CNOT6LQ96LI5 555 aaKnown RBP6.56□□□□□ -1.36
NUP88-212ENST00000576708 HEXIM2Q96MH2 286 aaKnown RBP6.56□□□□□ -1.36
NUP88-212ENST00000576708 ACOX2Q99424 681 aa6.56□□□□□ -1.36
NUP88-212ENST00000576708 EDEM2Q9BV94 578 aa6.56□□□□□ -1.36
NUP88-212ENST00000576708 SRRTQ9BXP5 876 aaKnown RBP6.56□□□□□ -1.36
NUP88-212ENST00000576708 NACA2Q9H009 215 aa6.56□□□□□ -1.36
NUP88-212ENST00000576708 GOLPH3LQ9H4A5 285 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms