RNA–Protein interactions for RNA: ENST00000576218.5

SMG6-220, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 902 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-220ENST00000576218 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa15.72■□□□□ 0.11
SMG6-220ENST00000576218 RNASEH1O60930 286 aaKnown RBP15.72■□□□□ 0.11
SMG6-220ENST00000576218 RHOCP08134 193 aa15.72■□□□□ 0.11
SMG6-220ENST00000576218 TPM1P09493 284 aa15.72■□□□□ 0.11
SMG6-220ENST00000576218 MPLP40238 635 aa15.72■□□□□ 0.11
SMG6-220ENST00000576218 CDH4P55283 916 aa15.72■□□□□ 0.11
SMG6-220ENST00000576218 ECT2LQ008S8 904 aa15.72■□□□□ 0.11
SMG6-220ENST00000576218 SULT2A1Q06520 285 aa15.72■□□□□ 0.11
SMG6-220ENST00000576218 CCDC6Q16204 474 aa15.72■□□□□ 0.11
SMG6-220ENST00000576218 PLEKHG6Q3KR16 790 aa15.72■□□□□ 0.11
SMG6-220ENST00000576218 AASDHQ4L235 1098 aaPredicted RBP15.72■□□□□ 0.11
SMG6-220ENST00000576218 FIGNQ5HY92 759 aa15.72■□□□□ 0.11
SMG6-220ENST00000576218 PMS2CLQ68D20 193 aa15.72■□□□□ 0.11
SMG6-220ENST00000576218 RNF43Q68DV7 783 aa15.72■□□□□ 0.11
SMG6-220ENST00000576218 TRNP1Q6NT89 227 aa15.72■□□□□ 0.11
SMG6-220ENST00000576218 KIAA0907Q7Z7F0 614 aaPredicted RBP15.72■□□□□ 0.11
SMG6-220ENST00000576218 TMPRSS6Q8IU80 811 aa15.72■□□□□ 0.11
SMG6-220ENST00000576218 TMEFF1Q8IYR6 380 aa15.72■□□□□ 0.11
SMG6-220ENST00000576218 OLIG1Q8TAK6 271 aa15.72■□□□□ 0.11
SMG6-220ENST00000576218 FAM172AQ8WUF8 416 aa15.72■□□□□ 0.11
SMG6-220ENST00000576218 AIPL1Q9NZN9 384 aa15.72■□□□□ 0.11
SMG6-220ENST00000576218 SLC25A13Q9UJS0 675 aa15.72■□□□□ 0.11
SMG6-220ENST00000576218 PCDHGA5Q9Y5G8 931 aa15.72■□□□□ 0.11
SMG6-220ENST00000576218 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.72■□□□□ 0.11
SMG6-220ENST00000576218 SNX10Q9Y5X0 201 aa15.72■□□□□ 0.11
SMG6-220ENST00000576218 A0A1W2PQJ5 194 aa15.71■□□□□ 0.11
SMG6-220ENST00000576218 C2CD4BA6NLJ0 364 aa15.71■□□□□ 0.11
SMG6-220ENST00000576218 FOXD2O60548 495 aaPredicted RBP15.71■□□□□ 0.11
SMG6-220ENST00000576218 SRPRAP08240 638 aaKnown RBP15.71■□□□□ 0.11
SMG6-220ENST00000576218 SKILP12757 684 aa15.71■□□□□ 0.11
SMG6-220ENST00000576218 RFC1P35251 1148 aaPredicted RBP15.71■□□□□ 0.11
SMG6-220ENST00000576218 PTPN9P43378 593 aa15.71■□□□□ 0.11
SMG6-220ENST00000576218 GSCP56915 257 aaPredicted RBP15.71■□□□□ 0.11
SMG6-220ENST00000576218 PTP4A2Q12974 167 aa15.71■□□□□ 0.11
SMG6-220ENST00000576218 ENPP2Q13822 863 aa15.71■□□□□ 0.11
SMG6-220ENST00000576218 MAP7D1Q3KQU3 841 aa15.71■□□□□ 0.11
SMG6-220ENST00000576218 CCDC14Q49A88 953 aa15.71■□□□□ 0.11
SMG6-220ENST00000576218 TTC31Q49AM3 519 aaPredicted RBP15.71■□□□□ 0.11
SMG6-220ENST00000576218 LYSMD4Q5XG99 296 aa15.71■□□□□ 0.11
SMG6-220ENST00000576218 RWDD4Q6NW29 188 aaKnown RBP15.71■□□□□ 0.11
SMG6-220ENST00000576218 SCYL2Q6P3W7 929 aa15.71■□□□□ 0.11
SMG6-220ENST00000576218 STRADAQ7RTN6 431 aa15.71■□□□□ 0.11
SMG6-220ENST00000576218 TFAP2DQ7Z6R9 452 aa15.71■□□□□ 0.11
SMG6-220ENST00000576218 C14orf80Q86SX3 495 aa15.71■□□□□ 0.11
SMG6-220ENST00000576218 MCOLN2Q8IZK6 566 aa15.71■□□□□ 0.11
SMG6-220ENST00000576218 APCDD1Q8J025 514 aa15.71■□□□□ 0.11
SMG6-220ENST00000576218 FRMD1Q8N878 549 aa15.71■□□□□ 0.11
SMG6-220ENST00000576218 OR2T3Q8NH03 318 aa15.71■□□□□ 0.11
SMG6-220ENST00000576218 GANCQ8TET4 914 aa15.71■□□□□ 0.11
SMG6-220ENST00000576218 TTC17Q96AE7 1141 aa15.71■□□□□ 0.11
SMG6-220ENST00000576218 TRIM11Q96F44 468 aa15.71■□□□□ 0.11
SMG6-220ENST00000576218 HAPLN3Q96S86 360 aa15.71■□□□□ 0.11
SMG6-220ENST00000576218 ADAM33Q9BZ11 813 aa15.71■□□□□ 0.11
SMG6-220ENST00000576218 XPO4Q9C0E2 1151 aaKnown RBP15.71■□□□□ 0.11
SMG6-220ENST00000576218 FBRSQ9HAH7 460 aa15.71■□□□□ 0.11
SMG6-220ENST00000576218 TMPRSS4Q9NRS4 437 aa15.71■□□□□ 0.11
SMG6-220ENST00000576218 ERVW-1Q9UQF0 538 aa15.71■□□□□ 0.11
SMG6-220ENST00000576218 LUC7L2Q9Y383 392 aaKnown RBP15.71■□□□□ 0.11
SMG6-220ENST00000576218 BZW2Q9Y6E2 419 aaKnown RBP15.71■□□□□ 0.11
SMG6-220ENST00000576218 SPAG17Q6Q759 2223 aa15.71■□□□□ 0.1
SMG6-220ENST00000576218 EML5Q05BV3 1969 aa15.7■□□□□ 0.1
SMG6-220ENST00000576218 SIGLEC16A6NMB1 481 aa15.7■□□□□ 0.1
SMG6-220ENST00000576218 E9PAM4 449 aa15.7■□□□□ 0.1
SMG6-220ENST00000576218 DNTTP04053 509 aa15.7■□□□□ 0.1
SMG6-220ENST00000576218 RRM1P23921 792 aa15.7■□□□□ 0.1
SMG6-220ENST00000576218 ZBED6P86452 979 aa15.7■□□□□ 0.1
SMG6-220ENST00000576218 CSRP2Q16527 193 aa15.7■□□□□ 0.1
SMG6-220ENST00000576218 PTPRNQ16849 979 aa15.7■□□□□ 0.1
SMG6-220ENST00000576218 ACCSLQ4AC99 568 aa15.7■□□□□ 0.1
SMG6-220ENST00000576218 C6orf118Q5T5N4 469 aa15.7■□□□□ 0.1
SMG6-220ENST00000576218 WDR59Q6PJI9 974 aa15.7■□□□□ 0.1
SMG6-220ENST00000576218 PRR23CQ6ZRP0 262 aa15.7■□□□□ 0.1
SMG6-220ENST00000576218 ZNF571Q7Z3V5 609 aaPredicted RBP15.7■□□□□ 0.1
SMG6-220ENST00000576218 DEFB119Q8N690 84 aa15.7■□□□□ 0.1
SMG6-220ENST00000576218 PIGKQ92643 395 aa15.7■□□□□ 0.1
SMG6-220ENST00000576218 ZNF653Q96CK0 615 aa15.7■□□□□ 0.1
SMG6-220ENST00000576218 RPL10LQ96L21 214 aaKnown RBP15.7■□□□□ 0.1
SMG6-220ENST00000576218 C1orf74Q96LT6 269 aa15.7■□□□□ 0.1
SMG6-220ENST00000576218 TTYH3Q9C0H2 523 aa15.7■□□□□ 0.1
SMG6-220ENST00000576218 MKRN2Q9H000 416 aaKnown RBP15.7■□□□□ 0.1
SMG6-220ENST00000576218 TMEM245Q9H330 911 aa15.7■□□□□ 0.1
SMG6-220ENST00000576218 PARD6AQ9NPB6 346 aa15.7■□□□□ 0.1
SMG6-220ENST00000576218 ANLNQ9NQW6 1124 aa15.7■□□□□ 0.1
SMG6-220ENST00000576218 VPS45Q9NRW7 570 aa15.7■□□□□ 0.1
SMG6-220ENST00000576218 PARVAQ9NVD7 372 aa15.7■□□□□ 0.1
SMG6-220ENST00000576218 TAS2R14Q9NYV8 317 aa15.7■□□□□ 0.1
SMG6-220ENST00000576218 CDV3Q9UKY7 258 aaKnown RBP15.7■□□□□ 0.1
SMG6-220ENST00000576218 INTS6Q9UL03 887 aaKnown RBP15.7■□□□□ 0.1
SMG6-220ENST00000576218 DYNC1LI1Q9Y6G9 523 aaKnown RBP15.7■□□□□ 0.1
SMG6-220ENST00000576218 SDK1Q7Z5N4 2213 aa15.7■□□□□ 0.1
SMG6-220ENST00000576218 WDR87Q6ZQQ6 2873 aa15.69■□□□□ 0.1
SMG6-220ENST00000576218 IGHV1OR15-9A0A0B4J2B8 117 aa15.69■□□□□ 0.1
SMG6-220ENST00000576218 EDDM13A0A1B0GTR0 161 aa15.69■□□□□ 0.1
SMG6-220ENST00000576218 MEI4A8MW99 385 aa15.69■□□□□ 0.1
SMG6-220ENST00000576218 PRR5-ARHGAP8B1AHC4 643 aa15.69■□□□□ 0.1
SMG6-220ENST00000576218 CCP110O43303 1012 aa15.69■□□□□ 0.1
SMG6-220ENST00000576218 ATMINO43313 823 aaPredicted RBP15.69■□□□□ 0.1
SMG6-220ENST00000576218 CNTN5O94779 1100 aa15.69■□□□□ 0.1
SMG6-220ENST00000576218 MZF1P28698 734 aaPredicted RBP15.69■□□□□ 0.1
SMG6-220ENST00000576218 CD6P30203 668 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms