RNA–Protein interactions for RNA: ENST00000575112.5

RPAIN-215, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 3,817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-215ENST00000575112 GRIP2Q9C0E4 1043 aa8.74□□□□□ -1.01
RPAIN-215ENST00000575112 KLHL4Q9C0H6 718 aa8.74□□□□□ -1.01
RPAIN-215ENST00000575112 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP8.74□□□□□ -1.01
RPAIN-215ENST00000575112 PAK5Q9P286 719 aa8.74□□□□□ -1.01
RPAIN-215ENST00000575112 SHOC2Q9UQ13 582 aa8.74□□□□□ -1.01
RPAIN-215ENST00000575112 TNFSF13BQ9Y275 285 aa8.74□□□□□ -1.01
RPAIN-215ENST00000575112 TDRKHQ9Y2W6 561 aaKnown RBP8.74□□□□□ -1.01
RPAIN-215ENST00000575112 C9IYK1 514 aa8.74□□□□□ -1.01
RPAIN-215ENST00000575112 VILLO15195 856 aa8.74□□□□□ -1.01
RPAIN-215ENST00000575112 ARSAP15289 507 aa8.74□□□□□ -1.01
RPAIN-215ENST00000575112 VAV1P15498 845 aa8.74□□□□□ -1.01
RPAIN-215ENST00000575112 VCLP18206 1134 aa8.74□□□□□ -1.01
RPAIN-215ENST00000575112 SERPINB5P36952 375 aa8.74□□□□□ -1.01
RPAIN-215ENST00000575112 GRIK1P39086 918 aa8.74□□□□□ -1.01
RPAIN-215ENST00000575112 THPOP40225 353 aa8.74□□□□□ -1.01
RPAIN-215ENST00000575112 CCR10P46092 362 aa8.74□□□□□ -1.01
RPAIN-215ENST00000575112 SLC18A1P54219 525 aa8.74□□□□□ -1.01
RPAIN-215ENST00000575112 GJA9P57773 515 aa8.74□□□□□ -1.01
RPAIN-215ENST00000575112 LSAMPQ13449 338 aa8.74□□□□□ -1.01
RPAIN-215ENST00000575112 TEX44Q53QW1 395 aa8.74□□□□□ -1.01
RPAIN-215ENST00000575112 FASTKD1Q53R41 847 aaKnown RBP8.74□□□□□ -1.01
RPAIN-215ENST00000575112 BOLA3Q53S33 107 aa8.74□□□□□ -1.01
RPAIN-215ENST00000575112 N4BP2L1Q5TBK1 243 aaPredicted RBP8.74□□□□□ -1.01
RPAIN-215ENST00000575112 DUS1LQ6P1R4 473 aaKnown RBP8.74□□□□□ -1.01
RPAIN-215ENST00000575112 RBM44Q6ZP01 1051 aaKnown RBP8.74□□□□□ -1.01
RPAIN-215ENST00000575112 ZBTB46Q86UZ6 589 aa8.74□□□□□ -1.01
RPAIN-215ENST00000575112 VCPIP1Q96JH7 1222 aa8.74□□□□□ -1.01
RPAIN-215ENST00000575112 IL1RL2Q9HB29 575 aa8.74□□□□□ -1.01
RPAIN-215ENST00000575112 PDLIM7Q9NR12 457 aa8.74□□□□□ -1.01
RPAIN-215ENST00000575112 IARS2Q9NSE4 1012 aaKnown RBP8.74□□□□□ -1.01
RPAIN-215ENST00000575112 GTSE1Q9NYZ3 720 aa8.74□□□□□ -1.01
RPAIN-215ENST00000575112 SENP1Q9P0U3 644 aa8.74□□□□□ -1.01
RPAIN-215ENST00000575112 FAM8A1Q9UBU6 413 aa8.74□□□□□ -1.01
RPAIN-215ENST00000575112 TLK1Q9UKI8 766 aa8.74□□□□□ -1.01
RPAIN-215ENST00000575112 SYNPO2Q9UMS6 1093 aa8.74□□□□□ -1.01
RPAIN-215ENST00000575112 TCRBV5S1A1TA0A578 114 aa8.73□□□□□ -1.01
RPAIN-215ENST00000575112 TMX2-CTNND1H3BSU7 103 aa8.73□□□□□ -1.01
RPAIN-215ENST00000575112 LSM8O95777 96 aaKnown RBP8.73□□□□□ -1.01
RPAIN-215ENST00000575112 ITGAVP06756 1048 aa8.73□□□□□ -1.01
RPAIN-215ENST00000575112 GSTA2P09210 222 aa8.73□□□□□ -1.01
RPAIN-215ENST00000575112 RAG1P15918 1043 aa8.73□□□□□ -1.01
RPAIN-215ENST00000575112 CYP3A5P20815 502 aa8.73□□□□□ -1.01
RPAIN-215ENST00000575112 ZNF143P52747 638 aaPredicted RBP8.73□□□□□ -1.01
RPAIN-215ENST00000575112 SLC6A3Q01959 620 aa8.73□□□□□ -1.01
RPAIN-215ENST00000575112 PDK1Q15118 436 aa8.73□□□□□ -1.01
RPAIN-215ENST00000575112 PDCD2Q16342 344 aaPredicted RBP8.73□□□□□ -1.01
RPAIN-215ENST00000575112 NOTUMQ6P988 496 aa8.73□□□□□ -1.01
RPAIN-215ENST00000575112 FRMD7Q6ZUT3 714 aa8.73□□□□□ -1.01
RPAIN-215ENST00000575112 TFB1MQ8WVM0 346 aaKnown RBP8.73□□□□□ -1.01
RPAIN-215ENST00000575112 SLC44A1Q8WWI5 657 aa8.73□□□□□ -1.01
RPAIN-215ENST00000575112 S100A14Q9HCY8 104 aa8.73□□□□□ -1.01
RPAIN-215ENST00000575112 SARS2Q9NP81 518 aaKnown RBP8.73□□□□□ -1.01
RPAIN-215ENST00000575112 TM9SF1O15321 606 aa8.73□□□□□ -1.01
RPAIN-215ENST00000575112 MSI1O43347 362 aaKnown RBP8.73□□□□□ -1.01
RPAIN-215ENST00000575112 TSPAN1O60635 241 aa8.73□□□□□ -1.01
RPAIN-215ENST00000575112 C22orf31O95567 290 aa8.73□□□□□ -1.01
RPAIN-215ENST00000575112 GSRP00390 522 aa8.73□□□□□ -1.01
RPAIN-215ENST00000575112 SMIM18P0DKX4 95 aa8.73□□□□□ -1.01
RPAIN-215ENST00000575112 STIP1P31948 543 aaKnown RBP8.73□□□□□ -1.01
RPAIN-215ENST00000575112 GALK1P51570 392 aa8.73□□□□□ -1.01
RPAIN-215ENST00000575112 MAXP61244 160 aa8.73□□□□□ -1.01
RPAIN-215ENST00000575112 SLC25A11Q02978 314 aaKnown RBP8.73□□□□□ -1.01
RPAIN-215ENST00000575112 TAP1Q03518 808 aa8.73□□□□□ -1.01
RPAIN-215ENST00000575112 CERCAMQ5T4B2 595 aa8.73□□□□□ -1.01
RPAIN-215ENST00000575112 LDB1Q86U70 411 aaPredicted RBP8.73□□□□□ -1.01
RPAIN-215ENST00000575112 FAM156AQ8NDB6 213 aa8.73□□□□□ -1.01
RPAIN-215ENST00000575112 ABTB1Q969K4 478 aaPredicted RBP8.73□□□□□ -1.01
RPAIN-215ENST00000575112 TASP1Q9H6P5 420 aa8.73□□□□□ -1.01
RPAIN-215ENST00000575112 NRDE2Q9H7Z3 1164 aa8.73□□□□□ -1.01
RPAIN-215ENST00000575112 CHST12Q9NRB3 414 aa8.73□□□□□ -1.01
RPAIN-215ENST00000575112 DNAAF2Q9NVR5 837 aaKnown RBP8.73□□□□□ -1.01
RPAIN-215ENST00000575112 URB1O60287 2271 aaKnown RBP8.73□□□□□ -1.01
RPAIN-215ENST00000575112 WDR81Q562E7 1941 aa8.73□□□□□ -1.01
RPAIN-215ENST00000575112 SPECC1L-ADORA2AF8WAN1 911 aa8.73□□□□□ -1.01
RPAIN-215ENST00000575112 MDM4O15151 490 aa8.73□□□□□ -1.01
RPAIN-215ENST00000575112 BEST1O76090 585 aa8.73□□□□□ -1.01
RPAIN-215ENST00000575112 AMHP03971 560 aa8.73□□□□□ -1.01
RPAIN-215ENST00000575112 AP2B1P63010 937 aa8.73□□□□□ -1.01
RPAIN-215ENST00000575112 TUBB3Q13509 450 aa8.73□□□□□ -1.01
RPAIN-215ENST00000575112 KRT72Q14CN4 511 aa8.73□□□□□ -1.01
RPAIN-215ENST00000575112 TAF12Q16514 161 aa8.73□□□□□ -1.01
RPAIN-215ENST00000575112 RABGAP1LQ5R372 815 aa8.73□□□□□ -1.01
RPAIN-215ENST00000575112 PPM1LQ5SGD2 360 aa8.73□□□□□ -1.01
RPAIN-215ENST00000575112 TMCO4Q5TGY1 634 aa8.73□□□□□ -1.01
RPAIN-215ENST00000575112 STRA8Q7Z7C7 330 aa8.73□□□□□ -1.01
RPAIN-215ENST00000575112 DHDDSQ86SQ9 333 aa8.73□□□□□ -1.01
RPAIN-215ENST00000575112 SLC26A11Q86WA9 606 aa8.73□□□□□ -1.01
RPAIN-215ENST00000575112 PIP4K2CQ8TBX8 421 aa8.73□□□□□ -1.01
RPAIN-215ENST00000575112 USP13Q92995 863 aaPredicted RBP8.73□□□□□ -1.01
RPAIN-215ENST00000575112 NKD2Q969F2 451 aaPredicted RBP8.73□□□□□ -1.01
RPAIN-215ENST00000575112 RRAGCQ9HB90 399 aa8.73□□□□□ -1.01
RPAIN-215ENST00000575112 BFARQ9NZS9 450 aa8.73□□□□□ -1.01
RPAIN-215ENST00000575112 PDP2Q9P2J9 529 aa8.73□□□□□ -1.01
RPAIN-215ENST00000575112 SFMBT1Q9UHJ3 866 aa8.73□□□□□ -1.01
RPAIN-215ENST00000575112 PGAP2Q9UHJ9 254 aa8.73□□□□□ -1.01
RPAIN-215ENST00000575112 PLLPQ9Y342 182 aa8.73□□□□□ -1.01
RPAIN-215ENST00000575112 HBS1LQ9Y450 684 aaKnown RBP8.73□□□□□ -1.01
RPAIN-215ENST00000575112 TEX264Q9Y6I9 313 aa8.73□□□□□ -1.01
RPAIN-215ENST00000575112 STX16-NPEPL1H3BU86 382 aa8.72□□□□□ -1.01
RPAIN-215ENST00000575112 TFAP2AP05549 437 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms