RNA–Protein interactions for RNA: ENST00000573328.5

NPLOC4-212, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2

Gene NPLOC4, Length 428 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-212ENST00000573328 INTS6Q9UL03 887 aaKnown RBP9.97□□□□□ -0.81
NPLOC4-212ENST00000573328 STAP1Q9ULZ2 295 aa9.97□□□□□ -0.81
NPLOC4-212ENST00000573328 DOCK9Q9BZ29 2069 aa9.96□□□□□ -0.81
NPLOC4-212ENST00000573328 EDDM13A0A1B0GTR0 161 aa9.96□□□□□ -0.82
NPLOC4-212ENST00000573328 A0A1B0GVM2 712 aa9.96□□□□□ -0.82
NPLOC4-212ENST00000573328 TCAF2A6NFQ2 919 aa9.96□□□□□ -0.82
NPLOC4-212ENST00000573328 METTL12A8MUP2 240 aa9.96□□□□□ -0.82
NPLOC4-212ENST00000573328 TTC34A8MYJ7 566 aa9.96□□□□□ -0.82
NPLOC4-212ENST00000573328 GOLGA8SH3BPF8 625 aa9.96□□□□□ -0.82
NPLOC4-212ENST00000573328 CER1O95813 267 aa9.96□□□□□ -0.82
NPLOC4-212ENST00000573328 SRPRAP08240 638 aaKnown RBP9.96□□□□□ -0.82
NPLOC4-212ENST00000573328 UCHL3P15374 230 aa9.96□□□□□ -0.82
NPLOC4-212ENST00000573328 CYP11B1P15538 503 aa9.96□□□□□ -0.82
NPLOC4-212ENST00000573328 NOS2P35228 1153 aa9.96□□□□□ -0.82
NPLOC4-212ENST00000573328 CTSOP43234 321 aaPredicted RBP9.96□□□□□ -0.82
NPLOC4-212ENST00000573328 PSMD8P48556 350 aa9.96□□□□□ -0.82
NPLOC4-212ENST00000573328 STK19P49842 368 aaPredicted RBP9.96□□□□□ -0.82
NPLOC4-212ENST00000573328 CENPCQ03188 943 aa9.96□□□□□ -0.82
NPLOC4-212ENST00000573328 ZBTB16Q05516 673 aa9.96□□□□□ -0.82
NPLOC4-212ENST00000573328 SFSWAPQ12872 951 aaKnown RBP9.96□□□□□ -0.82
NPLOC4-212ENST00000573328 TEAD4Q15561 434 aa9.96□□□□□ -0.82
NPLOC4-212ENST00000573328 ST3GAL2Q16842 350 aa9.96□□□□□ -0.82
NPLOC4-212ENST00000573328 HNRNPA1L2Q32P51 320 aaKnown RBP9.96□□□□□ -0.82
NPLOC4-212ENST00000573328 KLHDC7AQ5VTJ3 777 aa9.96□□□□□ -0.82
NPLOC4-212ENST00000573328 SLC26A9Q7LBE3 791 aa9.96□□□□□ -0.82
NPLOC4-212ENST00000573328 ADAT2Q7Z6V5 191 aaKnown RBP9.96□□□□□ -0.82
NPLOC4-212ENST00000573328 ERICH1Q86X53 443 aa9.96□□□□□ -0.82
NPLOC4-212ENST00000573328 FAM71AQ8IYT1 594 aa9.96□□□□□ -0.82
NPLOC4-212ENST00000573328 APCDD1Q8J025 514 aa9.96□□□□□ -0.82
NPLOC4-212ENST00000573328 CCAR2Q8N163 923 aaKnown RBP9.96□□□□□ -0.82
NPLOC4-212ENST00000573328 DNASE2BQ8WZ79 361 aa9.96□□□□□ -0.82
NPLOC4-212ENST00000573328 MYO19Q96H55 970 aa9.96□□□□□ -0.82
NPLOC4-212ENST00000573328 OMDQ99983 421 aa9.96□□□□□ -0.82
NPLOC4-212ENST00000573328 ZDHHC5Q9C0B5 715 aa9.96□□□□□ -0.82
NPLOC4-212ENST00000573328 SIK2Q9H0K1 926 aa9.96□□□□□ -0.82
NPLOC4-212ENST00000573328 PCED1AQ9H1Q7 454 aa9.96□□□□□ -0.82
NPLOC4-212ENST00000573328 VPS16Q9H269 839 aa9.96□□□□□ -0.82
NPLOC4-212ENST00000573328 LMBRD1Q9NUN5 540 aa9.96□□□□□ -0.82
NPLOC4-212ENST00000573328 FBXL12Q9NXK8 326 aa9.96□□□□□ -0.82
NPLOC4-212ENST00000573328 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP9.96□□□□□ -0.82
NPLOC4-212ENST00000573328 SLC25A13Q9UJS0 675 aa9.96□□□□□ -0.82
NPLOC4-212ENST00000573328 VANGL2Q9ULK5 521 aa9.96□□□□□ -0.82
NPLOC4-212ENST00000573328 PCDHB9Q9Y5E1 797 aa9.96□□□□□ -0.82
NPLOC4-212ENST00000573328 CACNA1BQ00975 2339 aa9.96□□□□□ -0.82
NPLOC4-212ENST00000573328 FRYQ5TBA9 3013 aa9.96□□□□□ -0.82
NPLOC4-212ENST00000573328 CEP295Q9C0D2 2601 aa9.95□□□□□ -0.82
NPLOC4-212ENST00000573328 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP9.95□□□□□ -0.82
NPLOC4-212ENST00000573328 SPAARA0A1B0GVQ0 90 aa9.95□□□□□ -0.82
NPLOC4-212ENST00000573328 A0A1W2PP55 124 aa9.95□□□□□ -0.82
NPLOC4-212ENST00000573328 MID1O15344 667 aa9.95□□□□□ -0.82
NPLOC4-212ENST00000573328 RNASEH2AO75792 299 aaKnown RBP9.95□□□□□ -0.82
NPLOC4-212ENST00000573328 MZF1P28698 734 aaPredicted RBP9.95□□□□□ -0.82
NPLOC4-212ENST00000573328 RDXP35241 583 aaKnown RBP9.95□□□□□ -0.82
NPLOC4-212ENST00000573328 MATKP42679 507 aa9.95□□□□□ -0.82
NPLOC4-212ENST00000573328 AFF3P51826 1226 aaKnown RBP9.95□□□□□ -0.82
NPLOC4-212ENST00000573328 OXCT1P55809 520 aa9.95□□□□□ -0.82
NPLOC4-212ENST00000573328 SIM1P81133 766 aaPredicted RBP9.95□□□□□ -0.82
NPLOC4-212ENST00000573328 SHC2P98077 582 aa9.95□□□□□ -0.82
NPLOC4-212ENST00000573328 DEUP1Q05D60 604 aa9.95□□□□□ -0.82
NPLOC4-212ENST00000573328 SULT2A1Q06520 285 aa9.95□□□□□ -0.82
NPLOC4-212ENST00000573328 KCNMA1Q12791 1236 aa9.95□□□□□ -0.82
NPLOC4-212ENST00000573328 SEMA3BQ13214 749 aa9.95□□□□□ -0.82
NPLOC4-212ENST00000573328 MTA1Q13330 715 aa9.95□□□□□ -0.82
NPLOC4-212ENST00000573328 ZNF177Q13360 481 aaPredicted RBP9.95□□□□□ -0.82
NPLOC4-212ENST00000573328 SLC12A1Q13621 1099 aa9.95□□□□□ -0.82
NPLOC4-212ENST00000573328 AUHQ13825 339 aaKnown RBP9.95□□□□□ -0.82
NPLOC4-212ENST00000573328 CST6Q15828 149 aa9.95□□□□□ -0.82
NPLOC4-212ENST00000573328 ACCSLQ4AC99 568 aa9.95□□□□□ -0.82
NPLOC4-212ENST00000573328 CT47A1Q5JQC4 288 aaPredicted RBP9.95□□□□□ -0.82
NPLOC4-212ENST00000573328 FKBP15Q5T1M5 1219 aa9.95□□□□□ -0.82
NPLOC4-212ENST00000573328 SMYD5Q6GMV2 418 aa9.95□□□□□ -0.82
NPLOC4-212ENST00000573328 FBXL22Q6P050 247 aa9.95□□□□□ -0.82
NPLOC4-212ENST00000573328 SASS6Q6UVJ0 657 aa9.95□□□□□ -0.82
NPLOC4-212ENST00000573328 IL27RAQ6UWB1 636 aa9.95□□□□□ -0.82
NPLOC4-212ENST00000573328 ZDHHC17Q8IUH5 632 aa9.95□□□□□ -0.82
NPLOC4-212ENST00000573328 MMAAQ8IVH4 418 aaKnown RBP9.95□□□□□ -0.82
NPLOC4-212ENST00000573328 KDM1BQ8NB78 822 aa9.95□□□□□ -0.82
NPLOC4-212ENST00000573328 ANKRD20A12PQ8NF67 263 aa9.95□□□□□ -0.82
NPLOC4-212ENST00000573328 ZNF397Q8NF99 534 aaPredicted RBP9.95□□□□□ -0.82
NPLOC4-212ENST00000573328 C18orf8Q96DM3 657 aa9.95□□□□□ -0.82
NPLOC4-212ENST00000573328 LMLNQ96KR4 655 aa9.95□□□□□ -0.82
NPLOC4-212ENST00000573328 MRGPRX3Q96LB0 322 aa9.95□□□□□ -0.82
NPLOC4-212ENST00000573328 PCMTD1Q96MG8 357 aaPredicted RBP9.95□□□□□ -0.82
NPLOC4-212ENST00000573328 PPP1R9BQ96SB3 815 aa9.95□□□□□ -0.82
NPLOC4-212ENST00000573328 PRMT1Q99873 361 aaKnown RBP9.95□□□□□ -0.82
NPLOC4-212ENST00000573328 MUC3BQ9H195 1237 aa9.95□□□□□ -0.82
NPLOC4-212ENST00000573328 RSPH9Q9H1X1 276 aaPredicted RBP9.95□□□□□ -0.82
NPLOC4-212ENST00000573328 PABPC3Q9H361 631 aaKnown RBP9.95□□□□□ -0.82
NPLOC4-212ENST00000573328 GAREM1Q9H706 876 aa9.95□□□□□ -0.82
NPLOC4-212ENST00000573328 SGK2Q9HBY8 427 aa9.95□□□□□ -0.82
NPLOC4-212ENST00000573328 PIGVQ9NUD9 493 aa9.95□□□□□ -0.82
NPLOC4-212ENST00000573328 DNAAF2Q9NVR5 837 aaKnown RBP9.95□□□□□ -0.82
NPLOC4-212ENST00000573328 RRN3Q9NYV6 651 aa9.95□□□□□ -0.82
NPLOC4-212ENST00000573328 VPS28Q9UK41 221 aa9.95□□□□□ -0.82
NPLOC4-212ENST00000573328 SCML1Q9UN30 329 aa9.95□□□□□ -0.82
NPLOC4-212ENST00000573328 ZBTB32Q9Y2Y4 487 aaPredicted RBP9.95□□□□□ -0.82
NPLOC4-212ENST00000573328 PAXBP1Q9Y5B6 917 aa9.95□□□□□ -0.82
NPLOC4-212ENST00000573328 HS3ST4Q9Y661 456 aa9.95□□□□□ -0.82
NPLOC4-212ENST00000573328 EPG5Q9HCE0 2579 aa9.94□□□□□ -0.82
NPLOC4-212ENST00000573328 ITIH6Q6UXX5 1313 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms