RNA–Protein interactions for RNA: ENST00000573203.5

NDE1-207, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 3

Gene NDE1, Length 762 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-207ENST00000573203 C12orf50Q8NA57 414 aaPredicted RBP9.4□□□□□ -0.9
NDE1-207ENST00000573203 MSANTD4Q8NCY6 345 aa9.4□□□□□ -0.9
NDE1-207ENST00000573203 NEK11Q8NG66 645 aa9.4□□□□□ -0.9
NDE1-207ENST00000573203 OR8K1Q8NGG5 319 aa9.4□□□□□ -0.9
NDE1-207ENST00000573203 EPS8L1Q8TE68 723 aa9.4□□□□□ -0.9
NDE1-207ENST00000573203 SORCS1Q8WY21 1168 aa9.4□□□□□ -0.9
NDE1-207ENST00000573203 DDX1Q92499 740 aaKnown RBP9.4□□□□□ -0.9
NDE1-207ENST00000573203 C18orf8Q96DM3 657 aa9.4□□□□□ -0.9
NDE1-207ENST00000573203 BTN2A3PQ96KV6 586 aa9.4□□□□□ -0.9
NDE1-207ENST00000573203 PRICKLE1Q96MT3 831 aaPredicted RBP9.4□□□□□ -0.9
NDE1-207ENST00000573203 NUCKS1Q9H1E3 243 aaKnown RBP9.4□□□□□ -0.9
NDE1-207ENST00000573203 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.4□□□□□ -0.9
NDE1-207ENST00000573203 DDIT4Q9NX09 232 aa9.4□□□□□ -0.9
NDE1-207ENST00000573203 CALCOCO1Q9P1Z2 691 aa9.4□□□□□ -0.9
NDE1-207ENST00000573203 XPO7Q9UIA9 1087 aaKnown RBP9.4□□□□□ -0.9
NDE1-207ENST00000573203 CDV3Q9UKY7 258 aaKnown RBP9.4□□□□□ -0.9
NDE1-207ENST00000573203 PLA2G4CQ9UP65 541 aa9.4□□□□□ -0.9
NDE1-207ENST00000573203 PAXBP1Q9Y5B6 917 aa9.4□□□□□ -0.9
NDE1-207ENST00000573203 CEP250Q9BV73 2442 aa9.39□□□□□ -0.91
NDE1-207ENST00000573203 LOC105378220A0A1B0GUY1 285 aaPredicted RBP9.39□□□□□ -0.91
NDE1-207ENST00000573203 BCLAF3A2AJT9 711 aaKnown RBP9.39□□□□□ -0.91
NDE1-207ENST00000573203 KCNU1A8MYU2 1149 aa9.39□□□□□ -0.91
NDE1-207ENST00000573203 F5H5T6 163 aa9.39□□□□□ -0.91
NDE1-207ENST00000573203 EPHB6O15197 1021 aa9.39□□□□□ -0.91
NDE1-207ENST00000573203 ZNF217O75362 1048 aa9.39□□□□□ -0.91
NDE1-207ENST00000573203 LSM8O95777 96 aaKnown RBP9.39□□□□□ -0.91
NDE1-207ENST00000573203 GYPCP04921 128 aa9.39□□□□□ -0.91
NDE1-207ENST00000573203 ATP5BP06576 529 aaKnown RBP9.39□□□□□ -0.91
NDE1-207ENST00000573203 EPHX1P07099 455 aa9.39□□□□□ -0.91
NDE1-207ENST00000573203 ZNF806P0C7X5 589 aa9.39□□□□□ -0.91
NDE1-207ENST00000573203 POLR2EP19388 210 aaKnown RBP9.39□□□□□ -0.91
NDE1-207ENST00000573203 TACR2P21452 398 aa9.39□□□□□ -0.91
NDE1-207ENST00000573203 CCR1P32246 355 aa9.39□□□□□ -0.91
NDE1-207ENST00000573203 NOS2P35228 1153 aa9.39□□□□□ -0.91
NDE1-207ENST00000573203 SOX5P35711 763 aa9.39□□□□□ -0.91
NDE1-207ENST00000573203 STAT1P42224 750 aa9.39□□□□□ -0.91
NDE1-207ENST00000573203 RNASE9P60153 205 aaKnown RBP9.39□□□□□ -0.91
NDE1-207ENST00000573203 NME3Q13232 169 aa9.39□□□□□ -0.91
NDE1-207ENST00000573203 CDH18Q13634 790 aa9.39□□□□□ -0.91
NDE1-207ENST00000573203 ENPP2Q13822 863 aa9.39□□□□□ -0.91
NDE1-207ENST00000573203 PUM1Q14671 1186 aaKnown RBP eCLIP9.39□□□□□ -0.912e-6■□□□□ 8.5
NDE1-207ENST00000573203 SF3A2Q15428 464 aaKnown RBP9.39□□□□□ -0.91
NDE1-207ENST00000573203 MAP7D1Q3KQU3 841 aa9.39□□□□□ -0.91
NDE1-207ENST00000573203 FUT11Q495W5 492 aa9.39□□□□□ -0.91
NDE1-207ENST00000573203 FNDC3BQ53EP0 1204 aaKnown RBP9.39□□□□□ -0.91
NDE1-207ENST00000573203 FAM102AQ5T9C2 384 aaPredicted RBP9.39□□□□□ -0.91
NDE1-207ENST00000573203 NAA35Q5VZE5 725 aa9.39□□□□□ -0.91
NDE1-207ENST00000573203 RAP1GAP2Q684P5 730 aa9.39□□□□□ -0.91
NDE1-207ENST00000573203 MBLAC2Q68D91 279 aa9.39□□□□□ -0.91
NDE1-207ENST00000573203 KIAA1324Q6UXG2 1013 aaKnown RBP9.39□□□□□ -0.91
NDE1-207ENST00000573203 SLC36A4Q6YBV0 504 aa9.39□□□□□ -0.91
NDE1-207ENST00000573203 CYP2U1Q7Z449 544 aa9.39□□□□□ -0.91
NDE1-207ENST00000573203 KIAA0907Q7Z7F0 614 aaPredicted RBP9.39□□□□□ -0.91
NDE1-207ENST00000573203 ZNF677Q86XU0 584 aa9.39□□□□□ -0.91
NDE1-207ENST00000573203 CFAP52Q8N1V2 620 aa9.39□□□□□ -0.91
NDE1-207ENST00000573203 FRMD1Q8N878 549 aa9.39□□□□□ -0.91
NDE1-207ENST00000573203 DDX51Q8N8A6 666 aaKnown RBP eCLIP9.39□□□□□ -0.91
NDE1-207ENST00000573203 ZNF397Q8NF99 534 aaPredicted RBP9.39□□□□□ -0.91
NDE1-207ENST00000573203 FIBINQ8TAL6 211 aa9.39□□□□□ -0.91
NDE1-207ENST00000573203 WFDC5Q8TCV5 224 aa9.39□□□□□ -0.91
NDE1-207ENST00000573203 CYB5D2Q8WUJ1 264 aa9.39□□□□□ -0.91
NDE1-207ENST00000573203 SLC20A1Q8WUM9 679 aa9.39□□□□□ -0.91
NDE1-207ENST00000573203 CPA5Q8WXQ8 436 aa9.39□□□□□ -0.91
NDE1-207ENST00000573203 DNAJC7Q99615 494 aa9.39□□□□□ -0.91
NDE1-207ENST00000573203 TTYH3Q9C0H2 523 aa9.39□□□□□ -0.91
NDE1-207ENST00000573203 SLC6A17Q9H1V8 727 aa9.39□□□□□ -0.91
NDE1-207ENST00000573203 PRDM16Q9HAZ2 1276 aa9.39□□□□□ -0.91
NDE1-207ENST00000573203 CD248Q9HCU0 757 aa9.39□□□□□ -0.91
NDE1-207ENST00000573203 VPS45Q9NRW7 570 aa9.39□□□□□ -0.91
NDE1-207ENST00000573203 RRN3Q9NYV6 651 aa9.39□□□□□ -0.91
NDE1-207ENST00000573203 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP9.39□□□□□ -0.91
NDE1-207ENST00000573203 MBD1Q9UIS9 605 aaPredicted RBP9.39□□□□□ -0.91
NDE1-207ENST00000573203 SIK3Q9Y2K2 1263 aa9.39□□□□□ -0.91
NDE1-207ENST00000573203 LUC7L2Q9Y383 392 aaKnown RBP9.39□□□□□ -0.91
NDE1-207ENST00000573203 CKAP5Q14008 2032 aa9.39□□□□□ -0.91
NDE1-207ENST00000573203 TNRC6BQ9UPQ9 1833 aaKnown RBP9.38□□□□□ -0.91
NDE1-207ENST00000573203 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa9.38□□□□□ -0.91
NDE1-207ENST00000573203 IGHV1OR15-9A0A0B4J2B8 117 aa9.38□□□□□ -0.91
NDE1-207ENST00000573203 H0Y626 953 aa9.38□□□□□ -0.91
NDE1-207ENST00000573203 GOLGA8SH3BPF8 625 aa9.38□□□□□ -0.91
NDE1-207ENST00000573203 M0QYT0 321 aa9.38□□□□□ -0.91
NDE1-207ENST00000573203 LUC7L3O95232 432 aaKnown RBP9.38□□□□□ -0.91
NDE1-207ENST00000573203 DLDP09622 509 aaKnown RBP9.38□□□□□ -0.91
NDE1-207ENST00000573203 PRKCHP24723 683 aa9.38□□□□□ -0.91
NDE1-207ENST00000573203 CASP14P31944 242 aa9.38□□□□□ -0.91
NDE1-207ENST00000573203 CD70P32970 193 aa9.38□□□□□ -0.91
NDE1-207ENST00000573203 SCNN1AP37088 669 aa9.38□□□□□ -0.91
NDE1-207ENST00000573203 MATKP42679 507 aa9.38□□□□□ -0.91
NDE1-207ENST00000573203 GABRB2P47870 512 aa9.38□□□□□ -0.91
NDE1-207ENST00000573203 SULT1E1P49888 294 aa9.38□□□□□ -0.91
NDE1-207ENST00000573203 ADKP55263 362 aaKnown RBP9.38□□□□□ -0.91
NDE1-207ENST00000573203 JAM2P57087 298 aa9.38□□□□□ -0.91
NDE1-207ENST00000573203 NOMO3P69849 1222 aa9.38□□□□□ -0.91
NDE1-207ENST00000573203 ZBED6P86452 979 aa9.38□□□□□ -0.91
NDE1-207ENST00000573203 CDR2Q01850 454 aa9.38□□□□□ -0.91
NDE1-207ENST00000573203 RPL6Q02878 288 aaKnown RBP9.38□□□□□ -0.91
NDE1-207ENST00000573203 LMAN2Q12907 356 aa9.38□□□□□ -0.91
NDE1-207ENST00000573203 EIF4EBP2Q13542 120 aaPredicted RBP9.38□□□□□ -0.91
NDE1-207ENST00000573203 C2CD6Q53TS8 623 aa9.38□□□□□ -0.91
NDE1-207ENST00000573203 RABGAP1LQ5R372 815 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms