RNA–Protein interactions for RNA: ENST00000571739.5

TRAPPC1-203, Transcript of trafficking protein particle complex 1, humanhuman

TSL 3

Gene TRAPPC1, Length 648 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-203ENST00000571739 PEBP4Q96S96 227 aa8.96□□□□□ -0.98
TRAPPC1-203ENST00000571739 GABRG3Q99928 467 aa8.96□□□□□ -0.98
TRAPPC1-203ENST00000571739 CIPCQ9C0C6 399 aa8.96□□□□□ -0.98
TRAPPC1-203ENST00000571739 IRF2BPLQ9H1B7 796 aa8.96□□□□□ -0.98
TRAPPC1-203ENST00000571739 TMEM245Q9H330 911 aa8.96□□□□□ -0.98
TRAPPC1-203ENST00000571739 MRPL47Q9HD33 250 aaKnown RBP8.96□□□□□ -0.98
TRAPPC1-203ENST00000571739 SPTLC3Q9NUV7 552 aa8.96□□□□□ -0.98
TRAPPC1-203ENST00000571739 NDFIP2Q9NV92 336 aa8.96□□□□□ -0.98
TRAPPC1-203ENST00000571739 ZSCAN32Q9NX65 697 aa8.96□□□□□ -0.98
TRAPPC1-203ENST00000571739 CACNA2D2Q9NY47 1150 aa8.96□□□□□ -0.98
TRAPPC1-203ENST00000571739 PPARGC1AQ9UBK2 798 aaKnown RBP8.96□□□□□ -0.98
TRAPPC1-203ENST00000571739 SLC8A2Q9UPR5 921 aa8.96□□□□□ -0.98
TRAPPC1-203ENST00000571739 NEU3Q9UQ49 428 aa8.96□□□□□ -0.98
TRAPPC1-203ENST00000571739 TBC1D30Q9Y2I9 924 aa8.96□□□□□ -0.98
TRAPPC1-203ENST00000571739 PAXBP1Q9Y5B6 917 aa8.96□□□□□ -0.98
TRAPPC1-203ENST00000571739 OR51B4Q9Y5P0 310 aa8.96□□□□□ -0.98
TRAPPC1-203ENST00000571739 RAD54BQ9Y620 910 aa8.96□□□□□ -0.98
TRAPPC1-203ENST00000571739 STON1Q9Y6Q2 735 aa8.96□□□□□ -0.98
TRAPPC1-203ENST00000571739 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP8.95□□□□□ -0.98
TRAPPC1-203ENST00000571739 A0A0D9SEW6 157 aa8.95□□□□□ -0.98
TRAPPC1-203ENST00000571739 CCDC163A0A0D9SF12 145 aa8.95□□□□□ -0.98
TRAPPC1-203ENST00000571739 A0A1B0GVM2 712 aa8.95□□□□□ -0.98
TRAPPC1-203ENST00000571739 TYW5A2RUC4 315 aaKnown RBP8.95□□□□□ -0.98
TRAPPC1-203ENST00000571739 TCAF2A6NFQ2 919 aa8.95□□□□□ -0.98
TRAPPC1-203ENST00000571739 LRCH4O75427 683 aa8.95□□□□□ -0.98
TRAPPC1-203ENST00000571739 LRIG2O94898 1065 aa8.95□□□□□ -0.98
TRAPPC1-203ENST00000571739 LCA5LO95447 670 aa8.95□□□□□ -0.98
TRAPPC1-203ENST00000571739 H2AFZP0C0S5 128 aa8.95□□□□□ -0.98
TRAPPC1-203ENST00000571739 TCF4P15884 667 aa8.95□□□□□ -0.98
TRAPPC1-203ENST00000571739 FECHP22830 423 aa8.95□□□□□ -0.98
TRAPPC1-203ENST00000571739 IL1R2P27930 398 aa8.95□□□□□ -0.98
TRAPPC1-203ENST00000571739 MIPP30301 263 aa8.95□□□□□ -0.98
TRAPPC1-203ENST00000571739 L1CAMP32004 1257 aa8.95□□□□□ -0.98
TRAPPC1-203ENST00000571739 NBL1P41271 181 aa8.95□□□□□ -0.98
TRAPPC1-203ENST00000571739 SCAPQ12770 1279 aa8.95□□□□□ -0.98
TRAPPC1-203ENST00000571739 SEMA3BQ13214 749 aa8.95□□□□□ -0.98
TRAPPC1-203ENST00000571739 SRSF5Q13243 272 aaKnown RBP8.95□□□□□ -0.98
TRAPPC1-203ENST00000571739 ZNF177Q13360 481 aaPredicted RBP8.95□□□□□ -0.98
TRAPPC1-203ENST00000571739 CDH18Q13634 790 aa8.95□□□□□ -0.98
TRAPPC1-203ENST00000571739 EIF4HQ15056 248 aaKnown RBP8.95□□□□□ -0.98
TRAPPC1-203ENST00000571739 CA9Q16790 459 aa8.95□□□□□ -0.98
TRAPPC1-203ENST00000571739 PLEKHG6Q3KR16 790 aa8.95□□□□□ -0.98
TRAPPC1-203ENST00000571739 ARL13BQ3SXY8 428 aa8.95□□□□□ -0.98
TRAPPC1-203ENST00000571739 PITRM1Q5JRX3 1037 aa8.95□□□□□ -0.98
TRAPPC1-203ENST00000571739 ACBD5Q5T8D3 534 aaPredicted RBP8.95□□□□□ -0.98
TRAPPC1-203ENST00000571739 LRRC31Q6UY01 552 aa8.95□□□□□ -0.98
TRAPPC1-203ENST00000571739 H2AFVQ71UI9 128 aa8.95□□□□□ -0.98
TRAPPC1-203ENST00000571739 NLRP14Q86W24 1093 aa8.95□□□□□ -0.98
TRAPPC1-203ENST00000571739 RASSF3Q86WH2 238 aa8.95□□□□□ -0.98
TRAPPC1-203ENST00000571739 CPNE8Q86YQ8 564 aa8.95□□□□□ -0.98
TRAPPC1-203ENST00000571739 AHI1Q8N157 1196 aa8.95□□□□□ -0.98
TRAPPC1-203ENST00000571739 ZNF557Q8N988 423 aaPredicted RBP8.95□□□□□ -0.98
TRAPPC1-203ENST00000571739 WFIKKN2Q8TEU8 576 aa8.95□□□□□ -0.98
TRAPPC1-203ENST00000571739 UCMAQ8WVF2 138 aa8.95□□□□□ -0.98
TRAPPC1-203ENST00000571739 MRGPRX3Q96LB0 322 aa8.95□□□□□ -0.98
TRAPPC1-203ENST00000571739 FEM1AQ9BSK4 669 aa8.95□□□□□ -0.98
TRAPPC1-203ENST00000571739 NUP85Q9BW27 656 aa8.95□□□□□ -0.98
TRAPPC1-203ENST00000571739 FAM126AQ9BYI3 521 aaPredicted RBP8.95□□□□□ -0.98
TRAPPC1-203ENST00000571739 DEF6Q9H4E7 631 aa8.95□□□□□ -0.98
TRAPPC1-203ENST00000571739 MTG2Q9H4K7 406 aa8.95□□□□□ -0.98
TRAPPC1-203ENST00000571739 OSGEPQ9NPF4 335 aa8.95□□□□□ -0.98
TRAPPC1-203ENST00000571739 GPATCH2LQ9NWQ4 482 aa8.95□□□□□ -0.98
TRAPPC1-203ENST00000571739 EBF1Q9UH73 591 aa8.95□□□□□ -0.98
TRAPPC1-203ENST00000571739 PCSK1NQ9UHG2 260 aa8.95□□□□□ -0.98
TRAPPC1-203ENST00000571739 SLCO3A1Q9UIG8 710 aa8.95□□□□□ -0.98
TRAPPC1-203ENST00000571739 SCINQ9Y6U3 715 aa8.95□□□□□ -0.98
TRAPPC1-203ENST00000571739 PROB1E7EW31 1015 aa8.94□□□□□ -0.98
TRAPPC1-203ENST00000571739 CLDN11O75508 207 aa8.94□□□□□ -0.98
TRAPPC1-203ENST00000571739 DLDP09622 509 aaKnown RBP8.94□□□□□ -0.98
TRAPPC1-203ENST00000571739 TMEM253P0C7T8 217 aa8.94□□□□□ -0.98
TRAPPC1-203ENST00000571739 HLA-EP13747 358 aa8.94□□□□□ -0.98
TRAPPC1-203ENST00000571739 HOXB2P14652 356 aa8.94□□□□□ -0.98
TRAPPC1-203ENST00000571739 GABRG2P18507 467 aa8.94□□□□□ -0.98
TRAPPC1-203ENST00000571739 POLR2EP19388 210 aaKnown RBP8.94□□□□□ -0.98
TRAPPC1-203ENST00000571739 PRKCHP24723 683 aa8.94□□□□□ -0.98
TRAPPC1-203ENST00000571739 CDC25BP30305 580 aa8.94□□□□□ -0.98
TRAPPC1-203ENST00000571739 DGKEP52429 567 aa8.94□□□□□ -0.98
TRAPPC1-203ENST00000571739 NRLP54845 237 aa8.94□□□□□ -0.98
TRAPPC1-203ENST00000571739 SLC12A1Q13621 1099 aa8.94□□□□□ -0.98
TRAPPC1-203ENST00000571739 ACAP1Q15027 740 aa8.94□□□□□ -0.98
TRAPPC1-203ENST00000571739 ERMARDQ5T6L9 678 aa8.94□□□□□ -0.98
TRAPPC1-203ENST00000571739 TTC39BQ5VTQ0 682 aaPredicted RBP8.94□□□□□ -0.98
TRAPPC1-203ENST00000571739 RNF219Q5W0B1 726 aaPredicted RBP8.94□□□□□ -0.98
TRAPPC1-203ENST00000571739 TXNRD3NBQ6F5E7 133 aa8.94□□□□□ -0.98
TRAPPC1-203ENST00000571739 SDE2Q6IQ49 451 aa8.94□□□□□ -0.98
TRAPPC1-203ENST00000571739 TRMT11Q7Z4G4 463 aaKnown RBP8.94□□□□□ -0.98
TRAPPC1-203ENST00000571739 WDR5BQ86VZ2 330 aa8.94□□□□□ -0.98
TRAPPC1-203ENST00000571739 LONP2Q86WA8 852 aa8.94□□□□□ -0.98
TRAPPC1-203ENST00000571739 FRMD1Q8N878 549 aa8.94□□□□□ -0.98
TRAPPC1-203ENST00000571739 ZNF366Q8N895 744 aa8.94□□□□□ -0.98
TRAPPC1-203ENST00000571739 SPC24Q8NBT2 197 aa8.94□□□□□ -0.98
TRAPPC1-203ENST00000571739 MDGA1Q8NFP4 955 aa8.94□□□□□ -0.98
TRAPPC1-203ENST00000571739 TSTD1Q8NFU3 115 aa8.94□□□□□ -0.98
TRAPPC1-203ENST00000571739 SLC35G2Q8TBE7 412 aa8.94□□□□□ -0.98
TRAPPC1-203ENST00000571739 ATRIPQ8WXE1 791 aa8.94□□□□□ -0.98
TRAPPC1-203ENST00000571739 RPL10LQ96L21 214 aaKnown RBP8.94□□□□□ -0.98
TRAPPC1-203ENST00000571739 PANX2Q96RD6 677 aa8.94□□□□□ -0.98
TRAPPC1-203ENST00000571739 PSMB7Q99436 277 aa8.94□□□□□ -0.98
TRAPPC1-203ENST00000571739 ZYG11BQ9C0D3 744 aa8.94□□□□□ -0.98
TRAPPC1-203ENST00000571739 SLC6A17Q9H1V8 727 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms